MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82230 bp
Accession: NZ_CP086925 Location: 1..82230 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-32 Replicon: plasmid P6
Accession: NZ_CP086925 Location: 1..82230 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-32 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE17_RS22185 (LOE17_22155) | 82..1260 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE17_RS22190 (LOE17_22160) | 1260..2576 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE17_RS22195 (LOE17_22165) | 2593..4140 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE17_RS22200 (LOE17_22170) | 4232..5002 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE17_RS22205 (LOE17_22175) | 5471..5746 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE17_RS22210 (LOE17_22180) | 5739..6032 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE17_RS22215 (LOE17_22185) | 6103..7008 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE17_RS22220 (LOE17_22190) | 7019..8758 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE17_RS22225 (LOE17_22195) | 9020..10555 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE17_RS22230 (LOE17_22200) | 10561..11535 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE17_RS22235 (LOE17_22205) | 11599..12813 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE17_RS22240 (LOE17_22210) | 12915..13553 | - | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE17_RS22245 (LOE17_22215) | 13613..14041 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE17_RS22250 (LOE17_22220) | 14272..15201 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE17_RS22255 (LOE17_22225) | 15188..15493 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE17_RS22260 (LOE17_22230) | 15622..15855 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE17_RS22265 (LOE17_22235) | 16194..17012 | + | 819 | Protein_16 | GTP-binding protein | - |
| LOE17_RS22270 (LOE17_22240) | 17091..17678 | - | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE17_RS22275 (LOE17_22245) | 17844..20734 | + | 2891 | Protein_18 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE17_RS22280 (LOE17_22250) | 20810..21952 | + | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE17_RS22285 (LOE17_22255) | 21949..22878 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE17_RS22290 (LOE17_22260) | 22922..23686 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE17_RS22295 (LOE17_22265) | 23683..25131 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE17_RS22300 (LOE17_22270) | 25162..25479 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE17_RS22305 (LOE17_22275) | 25489..26205 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE17_RS22310 (LOE17_22280) | 26221..26916 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE17_RS22315 (LOE17_22285) | 26909..27694 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE17_RS22320 (LOE17_22290) | 27691..28443 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE17_RS22325 (LOE17_22295) | 28710..29672 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE17_RS22330 (LOE17_22300) | 29758..31632 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE17_RS22335 (LOE17_22305) | 31654..33339 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE17_RS22340 (LOE17_22310) | 33365..34807 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE17_RS22345 (LOE17_22315) | 34831..35460 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE17_RS22350 (LOE17_22320) | 35876..37549 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE17_RS22355 (LOE17_22325) | 37558..38265 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE17_RS22360 (LOE17_22330) | 38404..41130 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE17_RS22365 (LOE17_22335) | 41100..42146 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE17_RS22370 (LOE17_22340) | 42152..44125 | - | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE17_RS22375 (LOE17_22345) | 44286..44849 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE17_RS22380 (LOE17_22350) | 45137..45724 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE17_RS22385 (LOE17_22355) | 45882..47336 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE17_RS22390 (LOE17_22360) | 47378..48703 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE17_RS22395 (LOE17_22365) | 48700..49395 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE17_RS22400 (LOE17_22370) | 49388..50638 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE17_RS22405 (LOE17_22375) | 50829..51449 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE17_RS22410 (LOE17_22380) | 51449..53533 | + | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE17_RS22415 (LOE17_22385) | 53632..54612 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE17_RS22420 (LOE17_22390) | 54609..55811 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE17_RS22425 (LOE17_22395) | 56437..57447 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE17_RS22430 (LOE17_22400) | 57584..59020 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE17_RS22435 (LOE17_22405) | 59017..60606 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE17_RS22440 (LOE17_22410) | 61181..61936 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE17_RS22445 (LOE17_22415) | 62049..62756 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE17_RS22450 (LOE17_22420) | 62753..63439 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE17_RS22455 (LOE17_22425) | 63648..65483 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE17_RS22460 (LOE17_22430) | 65652..67175 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE17_RS22465 (LOE17_22435) | 67305..68261 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE17_RS22470 (LOE17_22440) | 68670..69536 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE17_RS22475 (LOE17_22445) | 69548..69850 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE17_RS22480 (LOE17_22450) | 69940..70872 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE17_RS22485 (LOE17_22455) | 71041..72105 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE17_RS22490 (LOE17_22460) | 72187..73707 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE17_RS22495 (LOE17_22465) | 73720..74916 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE17_RS22500 (LOE17_22470) | 74929..76671 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE17_RS22505 (LOE17_22475) | 76671..77597 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE17_RS22510 (LOE17_22480) | 77634..78551 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE17_RS22515 (LOE17_22485) | 78640..79200 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE17_RS22520 (LOE17_22490) | 79197..80252 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE17_RS22525 (LOE17_22495) | 80249..81127 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE17_RS22530 (LOE17_22500) | 81418..82113 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|