MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110568 bp
Accession: NZ_CP086924 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-32 Replicon: plasmid P5
Accession: NZ_CP086924 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-32 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE17_RS21615 (LOE17_21585) | 108..625 | - | 518 | Protein_0 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE17_RS21620 (LOE17_21590) | 622..948 | - | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE17_RS21625 (LOE17_21595) | 1072..1725 | - | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE17_RS21630 (LOE17_21600) | 1725..2417 | - | 693 | WP_224557484.1 | regulator | - |
| LOE17_RS21635 (LOE17_21605) | 2490..4472 | - | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE17_RS21640 (LOE17_21610) | 4940..5971 | - | 1032 | WP_224558028.1 | IS110 family transposase ISRhru3 | Transposase |
| LOE17_RS21645 (LOE17_21615) | 6186..6575 | - | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE17_RS21650 (LOE17_21620) | 6663..6935 | - | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE17_RS21655 (LOE17_21625) | 6959..7897 | - | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE17_RS21660 (LOE17_21630) | 7938..8408 | - | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE17_RS21665 (LOE17_21635) | 8761..9054 | + | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE17_RS21670 (LOE17_21640) | 9083..9244 | - | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE17_RS21675 (LOE17_21645) | 9380..10081 | - | 702 | WP_028288616.1 | VIT family protein | - |
| LOE17_RS21680 (LOE17_21650) | 10078..11985 | - | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE17_RS21685 (LOE17_21655) | 11991..12971 | - | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE17_RS21690 (LOE17_21660) | 12952..15159 | - | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE17_RS21695 (LOE17_21665) | 15171..15641 | - | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE17_RS21700 (LOE17_21670) | 15677..16057 | - | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE17_RS21705 (LOE17_21675) | 16238..17623 | - | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE17_RS21710 (LOE17_21680) | 17580..17897 | - | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE17_RS21715 (LOE17_21685) | 18043..18702 | + | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE17_RS21720 (LOE17_21690) | 18699..20066 | + | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE17_RS21725 (LOE17_21695) | 20223..21984 | - | 1762 | Protein_22 | ParB N-terminal domain-containing protein | - |
| LOE17_RS21730 (LOE17_21700) | 22153..23364 | - | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE17_RS21735 (LOE17_21705) | 23578..24510 | - | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE17_RS21740 (LOE17_21710) | 24494..25687 | - | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE17_RS21745 (LOE17_21715) | 25896..26123 | + | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE17_RS21750 (LOE17_21720) | 26113..26508 | + | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE17_RS21755 (LOE17_21725) | 26587..27078 | - | 492 | Protein_28 | recombinase family protein | - |
| LOE17_RS21760 (LOE17_21730) | 27180..28319 | - | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE17_RS21765 (LOE17_21735) | 28446..29330 | + | 885 | WP_229997765.1 | DUF1403 family protein | - |
| LOE17_RS21770 (LOE17_21740) | 29378..29989 | + | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE17_RS21775 (LOE17_21745) | 31013..31879 | - | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE17_RS21780 (LOE17_21750) | 31896..33530 | - | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE17_RS21785 (LOE17_21755) | 33691..34689 | + | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE17_RS21790 (LOE17_21760) | 35017..36198 | - | 1182 | WP_224557529.1 | metal transporter | - |
| LOE17_RS21795 (LOE17_21765) | 36195..37193 | - | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE17_RS21800 (LOE17_21770) | 37520..37972 | + | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE17_RS21805 (LOE17_21775) | 37967..38416 | - | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE17_RS21810 (LOE17_21780) | 38578..40023 | + | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE17_RS21815 (LOE17_21785) | 40041..40970 | + | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE17_RS21820 (LOE17_21790) | 40970..41464 | + | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE17_RS21825 (LOE17_21795) | 41526..41978 | + | 453 | WP_224557528.1 | cytochrome c | - |
| LOE17_RS21830 (LOE17_21800) | 42270..42932 | + | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE17_RS21835 (LOE17_21805) | 42980..43264 | - | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE17_RS21840 (LOE17_21810) | 43447..45801 | + | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE17_RS21845 (LOE17_21815) | 45836..46102 | + | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE17_RS21850 (LOE17_21820) | 46285..46797 | + | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE17_RS21855 (LOE17_21825) | 47017..48018 | - | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE17_RS21860 (LOE17_21830) | 48015..49916 | - | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE17_RS21865 (LOE17_21835) | 49977..50144 | - | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE17_RS21870 (LOE17_21840) | 50135..51748 | - | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE17_RS21875 (LOE17_21845) | 51715..52173 | - | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE17_RS21880 (LOE17_21850) | 52202..52984 | - | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE17_RS21885 (LOE17_21855) | 52997..53452 | - | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE17_RS21890 (LOE17_21860) | 53456..54829 | - | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE17_RS21895 (LOE17_21865) | 54826..55452 | - | 627 | WP_028095367.1 | SCO family protein | - |
| LOE17_RS21900 (LOE17_21870) | 55452..55919 | - | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE17_RS21905 (LOE17_21875) | 55943..56602 | - | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE17_RS21910 (LOE17_21880) | 56599..57021 | - | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE17_RS21915 (LOE17_21885) | 57027..57593 | - | 567 | WP_028095363.1 | SCO family protein | - |
| LOE17_RS21920 (LOE17_21890) | 57801..58229 | + | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE17_RS21925 (LOE17_21895) | 58333..58911 | + | 579 | WP_028095362.1 | cation transporter | - |
| LOE17_RS21930 (LOE17_21900) | 59008..59763 | + | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE17_RS21935 (LOE17_21905) | 59753..60718 | + | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE17_RS21940 (LOE17_21910) | 60860..61060 | + | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE17_RS21945 (LOE17_21915) | 61057..61548 | + | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE17_RS21950 (LOE17_21920) | 61545..62285 | + | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE17_RS21955 (LOE17_21925) | 62386..63150 | - | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE17_RS21960 (LOE17_21930) | 63173..64045 | - | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE17_RS21965 (LOE17_21935) | 64169..64588 | - | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE17_RS21970 (LOE17_21940) | 64608..67115 | - | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE17_RS21975 (LOE17_21945) | 67256..67456 | + | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE17_RS21980 (LOE17_21950) | 67655..68077 | + | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE17_RS21985 (LOE17_21955) | 68372..69835 | + | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE17_RS21990 (LOE17_21960) | 69847..71205 | + | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE17_RS21995 (LOE17_21965) | 71253..71903 | + | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE17_RS22000 (LOE17_21970) | 71887..72669 | + | 783 | Protein_77 | LysR family transcriptional regulator | - |
| LOE17_RS22005 (LOE17_21975) | 72787..74787 | - | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE17_RS22010 (LOE17_21980) | 74796..77129 | - | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE17_RS22015 (LOE17_21985) | 77116..77673 | - | 558 | WP_224557513.1 | transposase | - |
| LOE17_RS22020 (LOE17_21990) | 78226..78432 | - | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE17_RS22025 (LOE17_21995) | 78971..79900 | - | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE17_RS22030 (LOE17_22000) | 80879..81595 | + | 717 | WP_224557509.1 | methyltransferase | - |
| LOE17_RS22035 (LOE17_22005) | 81631..82398 | - | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE17_RS22040 (LOE17_22010) | 82687..82965 | + | 279 | Protein_85 | transposase | - |
| LOE17_RS22045 (LOE17_22015) | 83126..84571 | + | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE17_RS22050 (LOE17_22020) | 84568..85182 | + | 615 | Protein_87 | IS21 family transposase ISPve1 | Transposase |
| LOE17_RS22055 (LOE17_22025) | 85262..86860 | + | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE17_RS22060 (LOE17_22030) | 86870..87664 | + | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE17_RS22065 (LOE17_22035) | 87661..89664 | + | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE17_RS22070 (LOE17_22040) | 89661..90827 | + | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE17_RS22075 (LOE17_22045) | 91147..91647 | - | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE17_RS22080 (LOE17_22050) | 91810..93012 | + | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE17_RS22085 (LOE17_22055) | 93041..94327 | + | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE17_RS22090 (LOE17_22060) | 94324..94839 | + | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE17_RS22095 (LOE17_22065) | 94905..95672 | + | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE17_RS22100 (LOE17_22070) | 95669..95995 | + | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE17_RS22105 (LOE17_22075) | 95970..96671 | + | 702 | WP_083416142.1 | TetR/AcrR family transcriptional regulator | - |
| LOE17_RS22110 (LOE17_22080) | 96726..97892 | + | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE17_RS22115 (LOE17_22085) | 97919..98791 | + | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE17_RS22120 (LOE17_22090) | 98784..99842 | + | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE17_RS22125 (LOE17_22095) | 99839..100639 | + | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE17_RS22130 (LOE17_22100) | 100632..101438 | + | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE17_RS22135 (LOE17_22105) | 101446..102300 | + | 855 | WP_224557497.1 | VOC family protein | - |
| LOE17_RS22140 (LOE17_22110) | 102333..103187 | + | 855 | WP_074838803.1 | VOC family protein | - |
| LOE17_RS22145 (LOE17_22115) | 103285..104286 | + | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE17_RS22150 (LOE17_22120) | 104325..105113 | + | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE17_RS22155 (LOE17_22125) | 105118..106053 | + | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE17_RS22160 (LOE17_22130) | 106050..107090 | + | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE17_RS22165 (LOE17_22135) | 107087..107908 | + | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE17_RS22170 (LOE17_22140) | 108089..108481 | - | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE17_RS22180 (LOE17_22150) | 109856..110137 | + | 282 | WP_224557491.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|