MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82228 bp
Accession: NZ_CP086917 Location: 1..82228 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-34 Replicon: plasmid P8
Accession: NZ_CP086917 Location: 1..82228 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-34 Replicon: plasmid P8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE18_RS24275 | 644..1995 | + | 1352 | Protein_1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE18_RS24280 (LOE18_24215) | 2104..3213 | + | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE18_RS24285 (LOE18_24220) | 3210..4139 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE18_RS24290 (LOE18_24225) | 4183..4947 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE18_RS24295 (LOE18_24230) | 4944..6392 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE18_RS24300 (LOE18_24235) | 6423..6740 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE18_RS24305 (LOE18_24240) | 6750..7466 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE18_RS24310 (LOE18_24245) | 7482..8177 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE18_RS24315 (LOE18_24250) | 8170..8955 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE18_RS24320 (LOE18_24255) | 8952..9704 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE18_RS24325 (LOE18_24260) | 9971..10933 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE18_RS24330 (LOE18_24265) | 11019..12893 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE18_RS24335 (LOE18_24270) | 12915..14600 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE18_RS24340 (LOE18_24275) | 14626..16068 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE18_RS24345 (LOE18_24280) | 16092..16721 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE18_RS24350 (LOE18_24285) | 17137..18810 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE18_RS24355 (LOE18_24290) | 18819..19526 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE18_RS24360 (LOE18_24295) | 19665..22391 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE18_RS24365 (LOE18_24300) | 22361..23407 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE18_RS24370 (LOE18_24305) | 23413..25386 | - | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE18_RS24375 (LOE18_24310) | 25547..26110 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE18_RS24380 (LOE18_24315) | 26398..26985 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE18_RS24385 (LOE18_24320) | 27143..28597 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE18_RS24390 (LOE18_24325) | 28639..29964 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE18_RS24395 (LOE18_24330) | 29961..30656 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE18_RS24400 (LOE18_24335) | 30649..31899 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE18_RS24405 (LOE18_24340) | 32090..32710 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE18_RS24410 (LOE18_24345) | 32710..34794 | + | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE18_RS24415 (LOE18_24350) | 34893..35873 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE18_RS24420 (LOE18_24355) | 35870..37072 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE18_RS24425 (LOE18_24360) | 37698..38708 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE18_RS24430 (LOE18_24365) | 38845..40281 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE18_RS24435 (LOE18_24370) | 40278..41867 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE18_RS24440 (LOE18_24375) | 42442..43197 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE18_RS24445 (LOE18_24380) | 43310..44017 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE18_RS24450 (LOE18_24385) | 44014..44700 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE18_RS24455 (LOE18_24390) | 44909..46744 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE18_RS24460 (LOE18_24395) | 46913..48436 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE18_RS24465 (LOE18_24400) | 48566..49522 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE18_RS24470 (LOE18_24405) | 49931..50797 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE18_RS24475 (LOE18_24410) | 50809..51111 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE18_RS24480 (LOE18_24415) | 51201..52133 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE18_RS24485 (LOE18_24420) | 52302..53366 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE18_RS24490 (LOE18_24425) | 53448..54968 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE18_RS24495 (LOE18_24430) | 54981..56177 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE18_RS24500 (LOE18_24435) | 56190..57932 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE18_RS24505 (LOE18_24440) | 57932..58858 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE18_RS24510 (LOE18_24445) | 58895..59812 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE18_RS24515 (LOE18_24450) | 59901..60461 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE18_RS24520 (LOE18_24455) | 60458..61513 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE18_RS24525 (LOE18_24460) | 61510..62388 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE18_RS24530 (LOE18_24465) | 62679..63374 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE18_RS24535 (LOE18_24470) | 63573..64751 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE18_RS24540 (LOE18_24475) | 64751..66067 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE18_RS24545 (LOE18_24480) | 66084..67631 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE18_RS24550 (LOE18_24485) | 67723..68493 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE18_RS24555 (LOE18_24490) | 68962..69237 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE18_RS24560 (LOE18_24495) | 69230..69523 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE18_RS24565 (LOE18_24500) | 69594..70499 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE18_RS24570 (LOE18_24505) | 70510..72249 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE18_RS24575 (LOE18_24510) | 72511..74046 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE18_RS24580 (LOE18_24515) | 74052..75026 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE18_RS24585 (LOE18_24520) | 75090..76304 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE18_RS24590 (LOE18_24525) | 76406..76993 | - | 588 | WP_229940666.1 | TetR/AcrR family transcriptional regulator | - |
| LOE18_RS24595 (LOE18_24530) | 77104..77532 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE18_RS24600 (LOE18_24535) | 77763..78692 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE18_RS24605 (LOE18_24540) | 78679..78984 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE18_RS24610 (LOE18_24545) | 79113..79346 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE18_RS24615 (LOE18_24550) | 79685..80503 | + | 819 | Protein_69 | GTP-binding protein | - |
| LOE18_RS24620 (LOE18_24555) | 80582..81169 | - | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE18_RS24625 | 81335..81925 | + | 591 | WP_229996733.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|