MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82229 bp
Accession: NZ_CP086907 Location: 1..82229 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-35 Replicon: plasmid P6
Accession: NZ_CP086907 Location: 1..82229 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-35 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE19_RS23815 (LOE19_23815) | 1..564 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE19_RS23820 (LOE19_23820) | 728..2698 | + | 1971 | WP_224557597.1 | caspase family protein | - |
| LOE19_RS23825 (LOE19_23825) | 2704..3750 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE19_RS23830 (LOE19_23830) | 3720..6446 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE19_RS23835 (LOE19_23835) | 6585..7292 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE19_RS23840 (LOE19_23840) | 7301..8974 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE19_RS23845 (LOE19_23845) | 9390..10019 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE19_RS23850 (LOE19_23850) | 10043..11485 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE19_RS23855 (LOE19_23855) | 11511..13196 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE19_RS23860 (LOE19_23860) | 13218..15092 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE19_RS23865 (LOE19_23865) | 15178..16140 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE19_RS23870 (LOE19_23870) | 16407..17159 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE19_RS23875 (LOE19_23875) | 17156..17941 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE19_RS23880 (LOE19_23880) | 17934..18629 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE19_RS23885 (LOE19_23885) | 18645..19361 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE19_RS23890 (LOE19_23890) | 19371..19688 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE19_RS23895 (LOE19_23895) | 19719..21167 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE19_RS23900 (LOE19_23900) | 21164..21928 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE19_RS23905 (LOE19_23905) | 21972..22901 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE19_RS23910 (LOE19_23910) | 22898..24040 | - | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE19_RS23915 (LOE19_23915) | 24116..27005 | - | 2890 | Protein_20 | Tn3 family transposase | - |
| LOE19_RS23920 (LOE19_23920) | 27171..27758 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE19_RS23925 (LOE19_23925) | 27837..28655 | - | 819 | Protein_22 | GTP-binding protein | - |
| LOE19_RS23930 (LOE19_23930) | 28994..29227 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE19_RS23935 (LOE19_23935) | 29356..29661 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE19_RS23940 (LOE19_23940) | 29648..30577 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE19_RS23945 (LOE19_23945) | 30808..31236 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE19_RS23950 (LOE19_23950) | 31296..31934 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE19_RS23955 (LOE19_23955) | 32036..33250 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE19_RS23960 (LOE19_23960) | 33314..34288 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE19_RS23965 (LOE19_23965) | 34294..35829 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE19_RS23970 (LOE19_23970) | 36091..37830 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE19_RS23975 (LOE19_23975) | 37841..38746 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE19_RS23980 (LOE19_23980) | 38817..39110 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE19_RS23985 (LOE19_23985) | 39103..39378 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE19_RS23990 (LOE19_23990) | 39847..40584 | - | 738 | WP_229940771.1 | GntR family transcriptional regulator | - |
| LOE19_RS23995 (LOE19_23995) | 40709..42256 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE19_RS24000 (LOE19_24000) | 42273..43589 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE19_RS24005 (LOE19_24005) | 43589..44767 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE19_RS24010 (LOE19_24010) | 44966..45661 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE19_RS24015 (LOE19_24015) | 45952..46830 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE19_RS24020 (LOE19_24020) | 46827..47882 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE19_RS24025 (LOE19_24025) | 47879..48439 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE19_RS24030 (LOE19_24030) | 48528..49445 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE19_RS24035 (LOE19_24035) | 49482..50408 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE19_RS24040 (LOE19_24040) | 50408..52150 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE19_RS24045 (LOE19_24045) | 52163..53359 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE19_RS24050 (LOE19_24050) | 53372..54892 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE19_RS24055 (LOE19_24055) | 54974..56038 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE19_RS24060 (LOE19_24060) | 56207..57139 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE19_RS24065 (LOE19_24065) | 57229..57531 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE19_RS24070 (LOE19_24070) | 57543..58409 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE19_RS24075 (LOE19_24075) | 58818..59774 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE19_RS24080 (LOE19_24080) | 59904..61427 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE19_RS24085 (LOE19_24085) | 61596..63431 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE19_RS24090 (LOE19_24090) | 63640..64326 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE19_RS24095 (LOE19_24095) | 64323..65030 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE19_RS24100 (LOE19_24100) | 65143..65898 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE19_RS24105 (LOE19_24105) | 66473..68062 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE19_RS24110 (LOE19_24110) | 68059..69495 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE19_RS24115 (LOE19_24115) | 69632..70642 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE19_RS24120 (LOE19_24120) | 71268..72470 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE19_RS24125 (LOE19_24125) | 72467..73447 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE19_RS24130 (LOE19_24130) | 73546..75618 | - | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE19_RS24135 (LOE19_24135) | 75630..76250 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE19_RS24140 (LOE19_24140) | 76408..77691 | + | 1284 | WP_229940774.1 | trypsin-like peptidase domain-containing protein | - |
| LOE19_RS24145 (LOE19_24145) | 77684..78379 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE19_RS24150 (LOE19_24150) | 78376..79701 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE19_RS24155 (LOE19_24155) | 79743..81197 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE19_RS24160 (LOE19_24160) | 81355..81942 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|