MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82231 bp
Accession: NZ_CP086895 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-37 Replicon: plasmid P1
Accession: NZ_CP086895 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-37 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE20_RS19240 (LOE20_19250) | 567..1130 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE20_RS19245 (LOE20_19255) | 1294..3264 | + | 1971 | WP_224557597.1 | caspase family protein | - |
| LOE20_RS19250 (LOE20_19260) | 3270..4316 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE20_RS19255 (LOE20_19265) | 4286..7012 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE20_RS19260 (LOE20_19270) | 7151..7858 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE20_RS19265 (LOE20_19275) | 7867..9540 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE20_RS19270 (LOE20_19280) | 9956..10585 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE20_RS19275 (LOE20_19285) | 10609..12051 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE20_RS19280 (LOE20_19290) | 12077..13762 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE20_RS19285 (LOE20_19295) | 13784..15658 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE20_RS19290 (LOE20_19300) | 15744..16706 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE20_RS19295 (LOE20_19305) | 16973..17725 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE20_RS19300 (LOE20_19310) | 17722..18507 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE20_RS19305 (LOE20_19315) | 18500..19195 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE20_RS19310 (LOE20_19320) | 19211..19927 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE20_RS19315 (LOE20_19325) | 19937..20254 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE20_RS19320 (LOE20_19330) | 20285..21733 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE20_RS19325 (LOE20_19335) | 21730..22494 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE20_RS19330 (LOE20_19340) | 22538..23467 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE20_RS19335 (LOE20_19345) | 23464..24606 | - | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE20_RS19340 (LOE20_19350) | 24682..27570 | - | 2889 | Protein_21 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE20_RS19345 (LOE20_19355) | 27736..28323 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE20_RS19350 (LOE20_19360) | 28402..29220 | - | 819 | Protein_23 | GTP-binding protein | - |
| LOE20_RS19355 (LOE20_19365) | 29559..29792 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE20_RS19360 (LOE20_19370) | 29921..30226 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE20_RS19365 (LOE20_19375) | 30213..31142 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE20_RS19370 (LOE20_19380) | 31373..31801 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE20_RS19375 (LOE20_19385) | 31861..32499 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE20_RS19380 (LOE20_19390) | 32601..33815 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE20_RS19385 (LOE20_19395) | 33879..34853 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE20_RS19390 (LOE20_19400) | 34859..36394 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE20_RS19395 (LOE20_19405) | 36656..38395 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE20_RS19400 (LOE20_19410) | 38406..39311 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE20_RS19405 (LOE20_19415) | 39382..39675 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE20_RS19410 (LOE20_19420) | 39668..39943 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE20_RS19415 (LOE20_19425) | 40412..41182 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE20_RS19420 (LOE20_19430) | 41274..42821 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE20_RS19425 (LOE20_19435) | 42838..44154 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE20_RS19430 (LOE20_19440) | 44154..45332 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE20_RS19435 (LOE20_19445) | 45531..46226 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE20_RS19440 (LOE20_19450) | 46517..47395 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE20_RS19445 (LOE20_19455) | 47392..48447 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE20_RS19450 (LOE20_19460) | 48444..49004 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE20_RS19455 (LOE20_19465) | 49093..50010 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE20_RS19460 (LOE20_19470) | 50047..50973 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE20_RS19465 (LOE20_19475) | 50973..52715 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE20_RS19470 (LOE20_19480) | 52728..53924 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE20_RS19475 (LOE20_19485) | 53937..55457 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE20_RS19480 (LOE20_19490) | 55539..56603 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE20_RS19485 (LOE20_19495) | 56772..57704 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE20_RS19490 (LOE20_19500) | 57794..58096 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE20_RS19495 (LOE20_19505) | 58108..58974 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE20_RS19500 (LOE20_19510) | 59383..60339 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE20_RS19505 (LOE20_19515) | 60469..61992 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE20_RS19510 (LOE20_19520) | 62161..63996 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE20_RS19515 (LOE20_19525) | 64205..64891 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE20_RS19520 (LOE20_19530) | 64888..65595 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE20_RS19525 (LOE20_19535) | 65708..66463 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE20_RS19530 (LOE20_19540) | 67038..68627 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE20_RS19535 (LOE20_19545) | 68624..70060 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE20_RS19540 (LOE20_19550) | 70197..71207 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE20_RS19545 (LOE20_19555) | 71833..73035 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE20_RS19550 (LOE20_19560) | 73032..74012 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE20_RS19555 (LOE20_19565) | 74111..76183 | - | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE20_RS19560 (LOE20_19570) | 76195..76815 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE20_RS19565 (LOE20_19575) | 77012..78256 | + | 1245 | WP_224557592.1 | trypsin-like peptidase domain-containing protein | - |
| LOE20_RS19570 (LOE20_19580) | 78249..78944 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE20_RS19575 (LOE20_19585) | 78941..80266 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE20_RS19580 (LOE20_19590) | 80308..81762 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|