MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82265 bp
Accession: NZ_CP086872 Location: 1..82265 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-97 Replicon: plasmid P2
Accession: NZ_CP086872 Location: 1..82265 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-97 Replicon: plasmid P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE23_RS19705 (LOE23_19695) | 749..2434 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE23_RS19710 (LOE23_19700) | 2456..4330 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE23_RS19715 (LOE23_19705) | 4416..5378 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE23_RS19720 (LOE23_19710) | 5645..6397 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE23_RS19725 (LOE23_19715) | 6394..7179 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE23_RS19730 (LOE23_19720) | 7172..7867 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE23_RS19735 (LOE23_19725) | 7883..8599 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE23_RS19740 (LOE23_19730) | 8609..8926 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE23_RS19745 (LOE23_19735) | 8957..10405 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE23_RS19750 (LOE23_19740) | 10402..11166 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE23_RS19755 (LOE23_19745) | 11210..12139 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE23_RS19760 (LOE23_19750) | 12136..13245 | - | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE23_RS19765 (LOE23_19755) | 13354..16239 | - | 2886 | Protein_13 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE23_RS19770 (LOE23_19760) | 16405..16991 | + | 587 | Protein_14 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE23_RS19775 (LOE23_19765) | 17070..17888 | - | 819 | Protein_15 | GTP-binding protein | - |
| LOE23_RS19780 (LOE23_19770) | 18227..18469 | - | 243 | WP_229940893.1 | hypothetical protein | - |
| LOE23_RS19785 (LOE23_19775) | 18589..18894 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE23_RS19790 (LOE23_19780) | 18881..19810 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE23_RS19795 (LOE23_19785) | 20041..20469 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE23_RS19800 (LOE23_19790) | 20529..21167 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE23_RS19805 (LOE23_19795) | 21269..22483 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE23_RS19810 (LOE23_19800) | 22547..23521 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE23_RS19815 (LOE23_19805) | 23527..25062 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE23_RS19820 (LOE23_19810) | 25324..27063 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE23_RS19825 (LOE23_19815) | 27074..27979 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE23_RS19830 (LOE23_19820) | 28050..28343 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE23_RS19835 (LOE23_19825) | 28336..28611 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE23_RS19840 (LOE23_19830) | 29080..29850 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE23_RS19845 (LOE23_19835) | 29942..31489 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE23_RS19850 (LOE23_19840) | 31506..32822 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE23_RS19855 (LOE23_19845) | 32822..34000 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE23_RS19860 (LOE23_19850) | 34199..34894 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE23_RS19865 (LOE23_19855) | 35185..36063 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE23_RS19870 (LOE23_19860) | 36060..37115 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE23_RS19875 (LOE23_19865) | 37112..37672 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE23_RS19880 (LOE23_19870) | 37761..38678 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE23_RS19885 (LOE23_19875) | 38715..39641 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE23_RS19890 (LOE23_19880) | 39641..41383 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE23_RS19895 (LOE23_19885) | 41396..42592 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE23_RS19900 (LOE23_19890) | 42605..44125 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE23_RS19905 (LOE23_19895) | 44207..45271 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE23_RS19910 (LOE23_19900) | 45440..46372 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE23_RS19915 (LOE23_19905) | 46462..46764 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE23_RS19920 (LOE23_19910) | 46776..47642 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE23_RS19925 (LOE23_19915) | 48051..49007 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE23_RS19930 (LOE23_19920) | 49137..50660 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE23_RS19935 (LOE23_19925) | 50829..52664 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE23_RS19940 (LOE23_19930) | 52873..53559 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE23_RS19945 (LOE23_19935) | 53556..54263 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE23_RS19950 (LOE23_19940) | 54376..55131 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE23_RS19955 (LOE23_19945) | 55706..57295 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE23_RS19960 (LOE23_19950) | 57292..58728 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE23_RS19965 (LOE23_19955) | 58865..59875 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE23_RS19970 (LOE23_19960) | 60501..61703 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE23_RS19975 (LOE23_19965) | 61700..62680 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE23_RS19980 (LOE23_19970) | 62779..64863 | - | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE23_RS19985 (LOE23_19975) | 64863..65483 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE23_RS19990 (LOE23_19980) | 65674..66924 | + | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE23_RS19995 (LOE23_19985) | 66917..67612 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE23_RS20000 (LOE23_19990) | 67609..68934 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE23_RS20005 (LOE23_19995) | 68976..70430 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE23_RS20010 (LOE23_20000) | 70588..71175 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE23_RS20015 (LOE23_20005) | 71463..72026 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE23_RS20020 (LOE23_20010) | 72187..74160 | + | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE23_RS20025 (LOE23_20015) | 74166..75212 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE23_RS20030 (LOE23_20020) | 75182..77908 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE23_RS20035 (LOE23_20025) | 78047..78754 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE23_RS20040 (LOE23_20030) | 78763..80436 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE23_RS20045 (LOE23_20035) | 80852..81481 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE23_RS20050 | 81505..82143 | - | 639 | WP_230073211.1 | FAD-linked oxidase C-terminal domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|