MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82229 bp
Accession: NZ_CP086837 Location: 1..82229 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-33 Replicon: plasmid P5
Accession: NZ_CP086837 Location: 1..82229 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-33 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE25_RS23200 (LOE25_23160) | 1260..2456 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE25_RS23205 (LOE25_23165) | 2469..3989 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE25_RS23210 (LOE25_23170) | 4071..5135 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE25_RS23215 (LOE25_23175) | 5304..6236 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE25_RS23220 (LOE25_23180) | 6326..6628 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE25_RS23225 (LOE25_23185) | 6640..7506 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE25_RS23230 (LOE25_23190) | 7915..8871 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE25_RS23235 (LOE25_23195) | 9001..10524 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE25_RS23240 (LOE25_23200) | 10693..12528 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE25_RS23245 (LOE25_23205) | 12737..13423 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE25_RS23250 (LOE25_23210) | 13420..14127 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE25_RS23255 (LOE25_23215) | 14240..14995 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE25_RS23260 (LOE25_23220) | 15570..17159 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE25_RS23265 (LOE25_23225) | 17156..18592 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE25_RS23270 (LOE25_23230) | 18729..19739 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE25_RS23275 (LOE25_23235) | 20365..21567 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE25_RS23280 (LOE25_23240) | 21564..22544 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE25_RS23285 (LOE25_23245) | 22643..24715 | - | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE25_RS23290 (LOE25_23250) | 24727..25347 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE25_RS23295 (LOE25_23255) | 25538..26788 | + | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE25_RS23300 (LOE25_23260) | 26781..27476 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE25_RS23305 (LOE25_23265) | 27473..28798 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE25_RS23310 (LOE25_23270) | 28840..30294 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE25_RS23315 (LOE25_23275) | 30452..31039 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE25_RS23320 (LOE25_23280) | 31327..31890 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE25_RS23325 (LOE25_23285) | 32051..34024 | + | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE25_RS23330 (LOE25_23290) | 34030..35076 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE25_RS23335 (LOE25_23295) | 35046..37772 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE25_RS23340 (LOE25_23300) | 37911..38618 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE25_RS23345 (LOE25_23305) | 38627..40300 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE25_RS23350 (LOE25_23310) | 40716..41345 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE25_RS23355 (LOE25_23315) | 41369..42811 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE25_RS23360 (LOE25_23320) | 42837..44522 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE25_RS23365 (LOE25_23325) | 44544..46418 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE25_RS23370 (LOE25_23330) | 46504..47466 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE25_RS23375 (LOE25_23335) | 47733..48485 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE25_RS23380 (LOE25_23340) | 48482..49267 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE25_RS23385 (LOE25_23345) | 49260..49955 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE25_RS23390 (LOE25_23350) | 49971..50687 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE25_RS23395 (LOE25_23355) | 50697..51014 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE25_RS23400 (LOE25_23360) | 51045..52493 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE25_RS23405 (LOE25_23365) | 52490..53254 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE25_RS23410 (LOE25_23370) | 53298..54227 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE25_RS23415 (LOE25_23375) | 54224..55333 | - | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE25_RS23420 (LOE25_23380) | 55442..58332 | - | 2891 | Protein_45 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE25_RS23425 (LOE25_23385) | 58498..59084 | + | 587 | Protein_46 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE25_RS23430 (LOE25_23390) | 59163..59981 | - | 819 | Protein_47 | GTP-binding protein | - |
| LOE25_RS23435 (LOE25_23395) | 60320..60553 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE25_RS23440 (LOE25_23400) | 60682..60987 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE25_RS23445 (LOE25_23405) | 60974..61903 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE25_RS23450 (LOE25_23410) | 62134..62562 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE25_RS23455 (LOE25_23415) | 62622..63260 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE25_RS23460 (LOE25_23420) | 63362..64576 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE25_RS23465 (LOE25_23425) | 64640..65614 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE25_RS23470 (LOE25_23430) | 65620..67155 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE25_RS23475 (LOE25_23435) | 67417..69156 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE25_RS23480 (LOE25_23440) | 69167..70072 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE25_RS23485 (LOE25_23445) | 70143..70436 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE25_RS23490 (LOE25_23450) | 70429..70704 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE25_RS23495 (LOE25_23455) | 71173..71910 | - | 738 | WP_229940771.1 | GntR family transcriptional regulator | - |
| LOE25_RS23500 (LOE25_23460) | 72035..73582 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE25_RS23505 (LOE25_23465) | 73599..74915 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE25_RS23510 (LOE25_23470) | 74915..76093 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE25_RS23515 (LOE25_23475) | 76292..76987 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE25_RS23520 (LOE25_23480) | 77278..78156 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE25_RS23525 (LOE25_23485) | 78153..79208 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE25_RS23530 (LOE25_23490) | 79205..79765 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE25_RS23535 (LOE25_23495) | 79854..80771 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE25_RS23540 (LOE25_23500) | 80808..81734 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|