MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82228 bp
Accession: NZ_CP086805 Location: 1..82228 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-47 Replicon: plasmid P7
Accession: NZ_CP086805 Location: 1..82228 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-47 Replicon: plasmid P7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE37_RS23040 (LOE37_23035) | 502..1827 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE37_RS23045 (LOE37_23040) | 1869..3323 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE37_RS23050 (LOE37_23045) | 3481..4068 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE37_RS23055 (LOE37_23050) | 4356..4919 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE37_RS23060 (LOE37_23055) | 5080..7053 | + | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE37_RS23065 (LOE37_23060) | 7059..8105 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE37_RS23070 (LOE37_23065) | 8075..10801 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE37_RS23075 (LOE37_23070) | 10940..11647 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE37_RS23080 (LOE37_23075) | 11656..13329 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE37_RS23085 (LOE37_23080) | 13745..14374 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE37_RS23090 (LOE37_23085) | 14398..15840 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE37_RS23095 (LOE37_23090) | 15866..17551 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE37_RS23100 (LOE37_23095) | 17573..19447 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE37_RS23105 (LOE37_23100) | 19533..20495 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE37_RS23110 (LOE37_23105) | 20762..21514 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE37_RS23115 (LOE37_23110) | 21511..22296 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE37_RS23120 (LOE37_23115) | 22289..22984 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE37_RS23125 (LOE37_23120) | 23000..23716 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE37_RS23130 (LOE37_23125) | 23726..24043 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE37_RS23135 (LOE37_23130) | 24074..25522 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE37_RS23140 (LOE37_23135) | 25519..26283 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE37_RS23145 (LOE37_23140) | 26327..27256 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE37_RS23150 (LOE37_23145) | 27253..28362 | - | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE37_RS23155 (LOE37_23150) | 28471..31359 | - | 2889 | Protein_24 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE37_RS23160 (LOE37_23155) | 31525..32112 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE37_RS23165 (LOE37_23160) | 32191..33009 | - | 819 | Protein_26 | GTP-binding protein | - |
| LOE37_RS23170 (LOE37_23165) | 33348..33581 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE37_RS23175 (LOE37_23170) | 33710..34015 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE37_RS23180 (LOE37_23175) | 34002..34931 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE37_RS23185 (LOE37_23180) | 35162..35590 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE37_RS23190 (LOE37_23185) | 35650..36288 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE37_RS23195 (LOE37_23190) | 36390..37604 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE37_RS23200 (LOE37_23195) | 37668..38642 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE37_RS23205 (LOE37_23200) | 38648..40183 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE37_RS23210 (LOE37_23205) | 40445..42184 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE37_RS23215 (LOE37_23210) | 42195..43100 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE37_RS23220 (LOE37_23215) | 43171..43464 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE37_RS23225 (LOE37_23220) | 43457..43732 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE37_RS23230 (LOE37_23225) | 44201..44971 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE37_RS23235 (LOE37_23230) | 45063..46610 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE37_RS23240 (LOE37_23235) | 46627..47943 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE37_RS23245 (LOE37_23240) | 47943..49121 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE37_RS23250 (LOE37_23245) | 49320..50015 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE37_RS23255 (LOE37_23250) | 50306..51184 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE37_RS23260 (LOE37_23255) | 51181..52236 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE37_RS23265 (LOE37_23260) | 52233..52793 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE37_RS23270 (LOE37_23265) | 52882..53799 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE37_RS23275 (LOE37_23270) | 53836..54762 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE37_RS23280 (LOE37_23275) | 54762..56504 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE37_RS23285 (LOE37_23280) | 56517..57713 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE37_RS23290 (LOE37_23285) | 57726..59246 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE37_RS23295 (LOE37_23290) | 59328..60392 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE37_RS23300 (LOE37_23295) | 60561..61493 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE37_RS23305 (LOE37_23300) | 61583..61885 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE37_RS23310 (LOE37_23305) | 61897..62763 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE37_RS23315 (LOE37_23310) | 63172..64128 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE37_RS23320 (LOE37_23315) | 64258..65781 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE37_RS23325 (LOE37_23320) | 65950..67785 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE37_RS23330 (LOE37_23325) | 67994..68680 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE37_RS23335 (LOE37_23330) | 68677..69384 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE37_RS23340 (LOE37_23335) | 69497..70252 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE37_RS23345 (LOE37_23340) | 70827..72416 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE37_RS23350 (LOE37_23345) | 72413..73849 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE37_RS23355 (LOE37_23350) | 73986..74996 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE37_RS23360 (LOE37_23355) | 75622..76824 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE37_RS23365 (LOE37_23360) | 76821..77801 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE37_RS23370 (LOE37_23365) | 77900..79984 | - | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE37_RS23375 (LOE37_23370) | 79984..80604 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE37_RS23380 (LOE37_23375) | 80795..82045 | + | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|