MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110568 bp
Accession: NZ_CP086793 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-67 Replicon: plasmid P3
Accession: NZ_CP086793 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-67 Replicon: plasmid P3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE38_RS20805 (LOE38_20790) | 431..712 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE38_RS20810 (LOE38_20795) | 931..2060 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRosp1 | Transposase |
| LOE38_RS20815 (LOE38_20800) | 2087..2479 | + | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE38_RS20820 (LOE38_20805) | 2660..3481 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE38_RS20825 (LOE38_20810) | 3478..4518 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE38_RS20830 (LOE38_20815) | 4515..5450 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE38_RS20835 (LOE38_20820) | 5455..6243 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE38_RS20840 (LOE38_20825) | 6282..7283 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE38_RS20845 (LOE38_20830) | 7381..8235 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE38_RS20850 (LOE38_20835) | 8268..9122 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE38_RS20855 (LOE38_20840) | 9130..9936 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE38_RS20860 (LOE38_20845) | 9929..10729 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE38_RS20865 (LOE38_20850) | 10726..11784 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE38_RS20870 (LOE38_20855) | 11777..12649 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE38_RS20875 (LOE38_20860) | 12676..13842 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE38_RS20880 (LOE38_20865) | 13897..14598 | - | 702 | WP_083416142.1 | TetR/AcrR family transcriptional regulator | - |
| LOE38_RS20885 (LOE38_20870) | 14573..14899 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE38_RS20890 (LOE38_20875) | 14896..15663 | - | 768 | WP_211568985.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| LOE38_RS20895 (LOE38_20880) | 15729..16244 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE38_RS20900 (LOE38_20885) | 16241..17527 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE38_RS20905 (LOE38_20890) | 17556..18758 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE38_RS20910 (LOE38_20895) | 18921..19421 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE38_RS20915 (LOE38_20900) | 19741..20907 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE38_RS20920 (LOE38_20905) | 20904..22907 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE38_RS20925 (LOE38_20910) | 22904..23698 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE38_RS20930 (LOE38_20915) | 23708..25306 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE38_RS20935 (LOE38_20920) | 25386..26000 | - | 615 | Protein_26 | IS21 family transposase ISPve1 | Transposase |
| LOE38_RS20940 (LOE38_20925) | 25997..27442 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE38_RS20945 (LOE38_20930) | 27603..27881 | - | 279 | Protein_28 | transposase | - |
| LOE38_RS20950 (LOE38_20935) | 28170..28937 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE38_RS20955 (LOE38_20940) | 28973..29689 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE38_RS20960 (LOE38_20945) | 30668..31597 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE38_RS20965 (LOE38_20950) | 32136..32342 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE38_RS20970 (LOE38_20955) | 32895..33452 | + | 558 | WP_224557513.1 | transposase | - |
| LOE38_RS20975 (LOE38_20960) | 33439..35772 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE38_RS20980 (LOE38_20965) | 35781..37781 | + | 2001 | WP_224557516.1 | Chromosome-partitioning protein ParB | VF |
| LOE38_RS20985 (LOE38_20970) | 37899..38681 | - | 783 | Protein_36 | LysR family transcriptional regulator | - |
| LOE38_RS20990 (LOE38_20975) | 38665..39315 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE38_RS20995 (LOE38_20980) | 39363..40721 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE38_RS21000 (LOE38_20985) | 40733..42196 | - | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE38_RS21005 (LOE38_20990) | 42491..42913 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE38_RS21010 (LOE38_20995) | 43112..43312 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE38_RS21015 (LOE38_21000) | 43453..45960 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE38_RS21020 (LOE38_21005) | 45980..46399 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE38_RS21025 (LOE38_21010) | 46523..47395 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE38_RS21030 (LOE38_21015) | 47418..48182 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE38_RS21035 (LOE38_21020) | 48283..49023 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE38_RS21040 (LOE38_21025) | 49020..49511 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE38_RS21045 (LOE38_21030) | 49508..49708 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE38_RS21050 (LOE38_21035) | 49850..50815 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE38_RS21055 (LOE38_21040) | 50805..51560 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE38_RS21060 (LOE38_21045) | 51657..52235 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE38_RS21065 (LOE38_21050) | 52339..52767 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE38_RS21070 (LOE38_21055) | 52975..53541 | + | 567 | WP_028095363.1 | SCO family protein | - |
| LOE38_RS21075 (LOE38_21060) | 53547..53969 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE38_RS21080 (LOE38_21065) | 53966..54625 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE38_RS21085 (LOE38_21070) | 54649..55116 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE38_RS21090 (LOE38_21075) | 55116..55742 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE38_RS21095 (LOE38_21080) | 55739..57112 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE38_RS21100 (LOE38_21085) | 57116..57571 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE38_RS21105 (LOE38_21090) | 57584..58366 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE38_RS21110 (LOE38_21095) | 58395..58853 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE38_RS21115 (LOE38_21100) | 58820..60433 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE38_RS21120 (LOE38_21105) | 60424..60591 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE38_RS21125 (LOE38_21110) | 60652..62553 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE38_RS21130 (LOE38_21115) | 62550..63551 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE38_RS21135 (LOE38_21120) | 63771..64283 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE38_RS21140 (LOE38_21125) | 64466..64732 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE38_RS21145 (LOE38_21130) | 64767..67121 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE38_RS21150 (LOE38_21135) | 67304..67588 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE38_RS21155 (LOE38_21140) | 67636..68298 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE38_RS21160 (LOE38_21145) | 68590..69042 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE38_RS21165 (LOE38_21150) | 69104..69598 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE38_RS21170 (LOE38_21155) | 69598..70527 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE38_RS21175 (LOE38_21160) | 70545..71990 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE38_RS21180 (LOE38_21165) | 72152..72601 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE38_RS21185 (LOE38_21170) | 72596..73048 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE38_RS21190 (LOE38_21175) | 73375..74373 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE38_RS21195 (LOE38_21180) | 74370..75551 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE38_RS21200 (LOE38_21185) | 75879..76877 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE38_RS21205 (LOE38_21190) | 77038..78672 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE38_RS21210 (LOE38_21195) | 78689..79555 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE38_RS21215 (LOE38_21200) | 80579..81190 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE38_RS21220 (LOE38_21205) | 81238..82122 | - | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE38_RS21225 (LOE38_21210) | 82249..83388 | + | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE38_RS21230 (LOE38_21215) | 83490..83981 | + | 492 | Protein_85 | recombinase family protein | - |
| LOE38_RS21235 (LOE38_21220) | 84060..84455 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE38_RS21240 (LOE38_21225) | 84445..84672 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE38_RS21245 (LOE38_21230) | 84881..86074 | + | 1194 | WP_009503867.1 | Iron-sulfur cluster carrier protein | VF |
| LOE38_RS21250 (LOE38_21235) | 86058..86990 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE38_RS21255 (LOE38_21240) | 87204..88415 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE38_RS21260 (LOE38_21245) | 88584..90345 | + | 1762 | Protein_91 | ParB N-terminal domain-containing protein | - |
| LOE38_RS21265 (LOE38_21250) | 90502..91869 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE38_RS21270 (LOE38_21255) | 91866..92525 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE38_RS21275 (LOE38_21260) | 92671..92988 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE38_RS21280 (LOE38_21265) | 92945..94330 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE38_RS21285 (LOE38_21270) | 94511..94891 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE38_RS21290 (LOE38_21275) | 94927..95397 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE38_RS21295 (LOE38_21280) | 95409..97616 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE38_RS21300 (LOE38_21285) | 97597..98577 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE38_RS21305 (LOE38_21290) | 98583..100490 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE38_RS21310 (LOE38_21295) | 100487..101188 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE38_RS21315 (LOE38_21300) | 101324..101485 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE38_RS21320 (LOE38_21305) | 101514..101807 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE38_RS21325 (LOE38_21310) | 102160..102630 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE38_RS21330 (LOE38_21315) | 102671..103609 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE38_RS21335 (LOE38_21320) | 103633..103905 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE38_RS21340 (LOE38_21325) | 103993..104382 | + | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE38_RS21345 (LOE38_21330) | 104597..105628 | + | 1032 | WP_224558028.1 | IS110 family transposase ISRhru3 | Transposase |
| LOE38_RS21350 (LOE38_21335) | 106096..108078 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE38_RS21355 (LOE38_21340) | 108151..108843 | + | 693 | WP_224557484.1 | regulator | - |
| LOE38_RS21360 (LOE38_21345) | 108843..109496 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE38_RS21365 (LOE38_21350) | 109620..109946 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE38_RS21370 (LOE38_21355) | 109943..110460 | + | 518 | Protein_113 | type II toxin-antitoxin system YhaV family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|