NZ_CP0867841..168026

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 168026 bp
Accession: NZ_CP086784        Location: 1..168026         Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-68       Replicon: plasmid P1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LOE39_RS19250 (LOE39_19245) 547..1101 - 555 WP_224558005.1 hypothetical protein -
LOE39_RS19255 (LOE39_19250) 2739..2846 - 108 Protein_1 transposase -
LOE39_RS19260 (LOE39_19255) 3061..4585 - 1525 Protein_2 IS66 family transposase ISAzs18 Transposase
LOE39_RS19265 (LOE39_19260) 4664..5011 - 348 WP_224558021.1 IS66 family transposase ISAzs18 Transposase
LOE39_RS19270 (LOE39_19265) 5008..5286 - 279 WP_229939064.1 IS66 family transposase ISSme3 Transposase
LOE39_RS19275 (LOE39_19270) 6046..6261 - 216 WP_229940644.1 hypothetical protein -
LOE39_RS19280 (LOE39_19275) 6581..6802 - 222 WP_224557965.1 hypothetical protein -
LOE39_RS19285 (LOE39_19280) 6805..8436 - 1632 WP_224557964.1 IS66 family transposase ISRel24 Transposase
LOE39_RS19290 (LOE39_19285) 8497..8847 - 351 WP_224557963.1 IS66 family transposase ISRel24 Transposase
LOE39_RS19295 (LOE39_19290) 8847..9248 - 402 WP_224557962.1 IS66 family transposase ISRel24 Transposase
LOE39_RS19300 (LOE39_19295) 9968..13198 - 3231 WP_224557960.1 type II CRISPR RNA-guided endonuclease Cas9 -
LOE39_RS19305 (LOE39_19300) 13751..13912 + 162 WP_224557958.1 IS256 family transposase ISPa1328 Transposase
LOE39_RS19310 (LOE39_19305) 14000..14764 - 765 WP_224558013.1 IS21 family transposase ISFK1 Transposase
LOE39_RS19315 (LOE39_19310) 14779..16317 - 1539 WP_229939051.1 IS21 family transposase ISFK1 Transposase
LOE39_RS19320 (LOE39_19315) 16571..17785 - 1215 WP_224558000.1 IS256 family transposase ISPa1328 Transposase
LOE39_RS19325 (LOE39_19320) 17730..18557 - 828 WP_224557999.1 AAA family ATPase -
LOE39_RS19330 (LOE39_19325) 18540..19498 + 959 Protein_16 IS481 family transposase -
LOE39_RS19335 (LOE39_19330) 20187..20345 + 159 WP_224557998.1 IS110 family transposase ISMdi12 Transposase
LOE39_RS19340 (LOE39_19335) 20428..21674 + 1247 Protein_18 IS3 family transposase ISGxy1 Transposase
LOE39_RS19345 (LOE39_19340) 21614..23140 - 1527 WP_224558022.1 IS66 family transposase ISAzs18 Transposase
LOE39_RS19350 (LOE39_19345) 23219..23565 - 347 Protein_20 IS66 family transposase ISBcen14 Transposase
LOE39_RS19355 (LOE39_19350) 23562..23840 - 279 WP_229939064.1 IS66 family transposase ISSme3 Transposase
LOE39_RS19360 (LOE39_19355) 24126..24719 - 594 WP_224556993.1 SMC-Scp complex subunit ScpB -
LOE39_RS19365 (LOE39_19360) 24722..25606 - 885 WP_224556992.1 DUF1403 family protein -
LOE39_RS19370 25870..26133 - 264 WP_229940645.1 hypothetical protein -
LOE39_RS19375 (LOE39_19365) 26133..26237 - 105 WP_229939115.1 hypothetical protein -
LOE39_RS19380 (LOE39_19370) 26658..27047 + 390 WP_224556990.1 helix-turn-helix domain-containing protein -
LOE39_RS19385 (LOE39_19375) 28822..28995 + 174 WP_229939113.1 DDE-type integrase/transposase/recombinase -
LOE39_RS19390 (LOE39_19380) 29281..29993 - 713 Protein_28 IS6 family transposase -
LOE39_RS19395 (LOE39_19385) 29887..30390 - 504 WP_224556988.1 type II toxin-antitoxin system VapC family toxin -
LOE39_RS19400 (LOE39_19390) 30417..30632 - 216 WP_224556986.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
LOE39_RS19405 (LOE39_19395) 30733..31347 - 615 WP_224556984.1 SMC-Scp complex subunit ScpB -
LOE39_RS19410 (LOE39_19400) 31350..32234 - 885 WP_224556983.1 DUF1403 family protein -
LOE39_RS19415 (LOE39_19405) 32951..33541 - 591 WP_229939111.1 NAD(P)H-dependent oxidoreductase -
LOE39_RS19420 (LOE39_19410) 34019..36478 - 2460 WP_224556981.1 hypothetical protein -
LOE39_RS19425 (LOE39_19415) 36482..37318 - 837 WP_224556979.1 5-dehydro-4-deoxy-D-glucuronate isomerase -
LOE39_RS19430 (LOE39_19420) 37561..38577 + 1017 WP_224556977.1 LacI family DNA-binding transcriptional regulator -
LOE39_RS19435 (LOE39_19425) 38582..39322 - 741 WP_224556975.1 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase VF
LOE39_RS19440 (LOE39_19430) 39336..40643 - 1308 WP_229939144.1 TRAP transporter large permease -
LOE39_RS19445 (LOE39_19435) 40666..41166 - 501 WP_224556969.1 TRAP transporter small permease -
LOE39_RS19450 (LOE39_19440) 41474..42541 + 1068 WP_224556967.1 TRAP transporter substrate-binding protein -
LOE39_RS19455 (LOE39_19445) 42573..43670 + 1098 WP_229939103.1 glycoside hydrolase family 88 protein -
LOE39_RS19460 (LOE39_19450) 43758..43916 + 159 Protein_42 short-chain dehydrogenase -
LOE39_RS19465 (LOE39_19455) 44399..45598 + 1200 WP_037930394.1 Cell division protein PomZ VF
LOE39_RS19470 (LOE39_19460) 45598..46569 + 972 WP_224556962.1 plasmid partitioning protein RepB -
LOE39_RS19475 (LOE39_19465) 46808..47863 + 1056 WP_224556960.1 plasmid replication protein RepC -
LOE39_RS19480 (LOE39_19470) 49693..50574 + 882 WP_224556958.1 zinc-binding dehydrogenase -
LOE39_RS19485 (LOE39_19475) 50792..51495 - 704 Protein_47 IS6 family transposase ISRH1 Transposase
LOE39_RS19490 (LOE39_19480) 51586..52404 + 819 WP_229940646.1 hypothetical protein -
LOE39_RS19495 (LOE39_19485) 52465..52731 - 267 WP_224556955.1 Txe/YoeB family addiction module toxin Toxin Detail
LOE39_RS19500 (LOE39_19490) 52728..52979 - 252 WP_224556953.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin Detail
LOE39_RS19505 (LOE39_19495) 53611..54522 - 912 Protein_51 IS3 family transposase ISXau3 Transposase
LOE39_RS19510 (LOE39_19500) 54523..55467 - 945 Protein_52 IS110 family transposase ISWpi13 Transposase
LOE39_RS19515 (LOE39_19505) 55633..56124 + 492 WP_224557005.1 3-keto-5-aminohexanoate cleavage protein -
LOE39_RS19520 (LOE39_19510) 56366..56722 + 357 WP_224556951.1 hypothetical protein -
LOE39_RS19525 (LOE39_19515) 56785..58452 + 1668 WP_224556950.1 sulfatase-like hydrolase/transferase -
LOE39_RS19530 (LOE39_19520) 58504..58640 + 137 Protein_56 IS481 family transposase -
LOE39_RS19535 (LOE39_19525) 58628..59761 - 1134 WP_224557003.1 FAD-dependent monooxygenase -
LOE39_RS19540 (LOE39_19530) 59955..63368 - 3414 WP_224556949.1 molybdopterin-dependent oxidoreductase -
LOE39_RS19545 (LOE39_19535) 63365..63877 - 513 WP_224556948.1 (2Fe-2S)-binding protein -
LOE39_RS19550 (LOE39_19540) 64173..64637 + 465 WP_224556946.1 MarR family transcriptional regulator -
LOE39_RS19555 (LOE39_19545) 64645..65313 + 669 WP_224556944.1 HTH-type transcriptional repressor VF
LOE39_RS19560 (LOE39_19550) 65474..66175 + 702 WP_224557001.1 maleate isomerase -
LOE39_RS19565 (LOE39_19555) 66187..66969 + 783 WP_224556941.1 alpha/beta hydrolase -
LOE39_RS19570 (LOE39_19560) 66997..68028 + 1032 WP_224556938.1 leucyl aminopeptidase -
LOE39_RS19575 (LOE39_19565) 68050..68673 + 624 WP_224556935.1 isochorismatase family protein -
LOE39_RS19580 (LOE39_19570) 68790..68975 + 186 WP_224556932.1 hypothetical protein -
LOE39_RS19585 (LOE39_19575) 68972..70453 + 1482 WP_224556929.1 sodium:solute symporter family protein -
LOE39_RS19590 (LOE39_19580) 70834..71052 - 219 WP_224556926.1 4-oxalocrotonate tautomerase family protein -
LOE39_RS19595 (LOE39_19585) 71056..71436 - 381 WP_224556923.1 nuclear transport factor 2 family protein -
LOE39_RS19600 (LOE39_19590) 71433..72044 - 612 WP_224556921.1 glutathione transferase GstA -
LOE39_RS19605 (LOE39_19595) 72145..73032 + 888 WP_224556916.1 LysR family transcriptional regulator -
LOE39_RS19610 (LOE39_19600) 73334..73855 - 522 WP_224556913.1 carbon monoxide dehydrogenase subunit G -
LOE39_RS19615 (LOE39_19605) 73869..74264 - 396 WP_224556911.1 cytochrome c family protein -
LOE39_RS19620 (LOE39_19610) 74435..74542 + 108 WP_224556908.1 pyrroloquinoline quinone precursor peptide PqqA -
LOE39_RS19625 (LOE39_19615) 74556..75443 + 888 WP_224556905.1 pyrroloquinoline quinone biosynthesis protein PqqB -
LOE39_RS19630 (LOE39_19620) 75440..76183 + 744 WP_224556903.1 pyrroloquinoline-quinone synthase PqqC -
LOE39_RS19635 (LOE39_19625) 76183..76461 + 279 WP_224556902.1 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD -
LOE39_RS19640 (LOE39_19630) 76445..77530 + 1086 WP_224556900.1 pyrroloquinoline quinone biosynthesis protein PqqE -
LOE39_RS19645 (LOE39_19635) 77546..78232 + 687 WP_224556898.1 vWA domain-containing protein -
LOE39_RS19650 (LOE39_19640) 78229..79005 - 777 WP_224556896.1 ABC transporter permease -
LOE39_RS19655 (LOE39_19645) 79129..81210 + 2082 WP_224556895.1 4Fe-4S binding protein -
LOE39_RS19660 (LOE39_19650) 81207..82079 + 873 WP_224556893.1 FAD:protein FMN transferase -
LOE39_RS19665 (LOE39_19655) 82144..82926 - 783 WP_224556891.1 xanthine dehydrogenase family protein subunit M -
LOE39_RS19670 (LOE39_19660) 82937..85309 - 2373 WP_224556889.1 xanthine dehydrogenase family protein molybdopterin-binding subunit -
LOE39_RS19675 (LOE39_19665) 85331..85816 - 486 WP_224556887.1 (2Fe-2S)-binding protein -
LOE39_RS19680 (LOE39_19670) 85966..86838 - 873 WP_224556997.1 transporter substrate-binding domain-containing protein -
LOE39_RS19685 (LOE39_19675) 86873..87571 - 699 WP_224556885.1 cytochrome c-550 PedF -
LOE39_RS19690 (LOE39_19680) 87713..88891 + 1179 WP_229940639.1 ABC transporter substrate-binding protein -
LOE39_RS19695 (LOE39_19685) 88888..89847 + 960 WP_224556880.1 YVTN family beta-propeller repeat protein -
LOE39_RS19700 (LOE39_19690) 89865..90314 + 450 WP_224556878.1 hypothetical protein -
LOE39_RS19705 (LOE39_19695) 90311..91027 + 717 WP_224556875.1 putative ABC transporter ATP-binding protein YadG VF
LOE39_RS19710 (LOE39_19700) 91024..91815 + 792 WP_224556871.1 ABC transporter permease -
LOE39_RS19715 (LOE39_19705) 91850..92386 + 537 WP_224556869.1 hypothetical protein VF
LOE39_RS19720 (LOE39_19710) 92326..93000 - 675 WP_224556995.1 Taurine import ATP-binding protein TauB VF
LOE39_RS19725 (LOE39_19715) 93006..93983 - 978 WP_224556865.1 ABC transporter substrate-binding protein -
LOE39_RS19730 (LOE39_19720) 94171..95946 + 1776 WP_224556863.1 PQQ-dependent methanol/ethanol family dehydrogenase -
LOE39_RS19735 (LOE39_19725) 96057..96758 + 702 WP_224556861.1 response regulator transcription factor -
LOE39_RS19740 (LOE39_19730) 96945..97991 + 1047 WP_229939099.1 FIST N-terminal domain-containing protein -
LOE39_RS19745 (LOE39_19735) 97988..100210 + 2223 WP_224556857.1 PAS-domain containing protein -
LOE39_RS19750 (LOE39_19740) 100360..100911 - 552 WP_224556854.1 Protein YrdA VF
LOE39_RS19755 (LOE39_19745) 100999..101757 - 759 WP_224556852.1 enoyl-CoA hydratase -
LOE39_RS19760 (LOE39_19750) 101943..102416 - 474 WP_224556849.1 MarR family winged helix-turn-helix transcriptional regulator -
LOE39_RS19765 (LOE39_19755) 102889..103140 + 252 WP_224556848.1 helix-turn-helix domain-containing protein -
LOE39_RS19770 (LOE39_19760) 103140..104474 + 1335 WP_224556846.1 type II toxin-antitoxin system HipA family toxin -
LOE39_RS19775 (LOE39_19765) 104892..105182 - 291 WP_224556843.1 hypothetical protein -
LOE39_RS19780 (LOE39_19770) 105599..106171 - 573 WP_229939138.1 TetR/AcrR family transcriptional regulator -
LOE39_RS19785 (LOE39_19775) 106310..106807 + 498 WP_224556840.1 (2Fe-2S)-binding protein -
LOE39_RS19790 (LOE39_19780) 106804..107859 + 1056 WP_224556839.1 xanthine dehydrogenase family protein subunit M -
LOE39_RS19795 (LOE39_19785) 107852..110098 + 2247 WP_224556838.1 xanthine dehydrogenase family protein molybdopterin-binding subunit -
LOE39_RS19800 (LOE39_19790) 110739..112739 - 2001 WP_224556837.1 TonB-dependent siderophore receptor -
LOE39_RS19805 (LOE39_19795) 112907..113737 - 831 WP_224556836.1 putative siderophore transport system ATP-binding protein YusV VF
LOE39_RS19810 (LOE39_19800) 113734..114708 - 975 WP_229939136.1 Iron-uptake system permease protein FeuC VF
LOE39_RS19815 (LOE39_19805) 114777..115778 - 1002 WP_229939097.1 putative siderophore transport system permease protein YfiZ VF
LOE39_RS19820 (LOE39_19810) 115775..116746 - 972 WP_224556833.1 ABC transporter substrate-binding protein -
LOE39_RS19825 (LOE39_19815) 116787..117845 - 1059 WP_224556832.1 siderophore-interacting protein -
LOE39_RS19830 (LOE39_19820) 117996..118955 - 960 WP_224556831.1 LysR family transcriptional regulator -
LOE39_RS19835 (LOE39_19825) 119126..119575 + 450 WP_224556829.1 tripartite tricarboxylate transporter TctB family protein -
LOE39_RS19840 (LOE39_19830) 119583..121118 + 1536 WP_224556827.1 tripartite tricarboxylate transporter permease -
LOE39_RS19845 (LOE39_19835) 121137..122099 + 963 WP_224556825.1 tripartite tricarboxylate transporter substrate binding protein -
LOE39_RS19850 (LOE39_19840) 122187..123389 + 1203 WP_224556823.1 CoA transferase -
LOE39_RS19855 (LOE39_19845) 123442..125673 - 2232 WP_051694640.1 TRAP transporter permease -
LOE39_RS19860 (LOE39_19850) 125670..126176 - 507 WP_051694641.1 DUF1850 domain-containing protein -
LOE39_RS19865 (LOE39_19855) 126176..127153 - 978 WP_037930311.1 TAXI family TRAP transporter solute-binding subunit -
LOE39_RS19870 (LOE39_19860) 127296..128111 + 816 WP_229940640.1 N-formylglutamate deformylase -
LOE39_RS19875 (LOE39_19865) 128108..129535 + 1428 WP_224556820.1 formimidoylglutamate deiminase -
LOE39_RS19880 (LOE39_19870) 129547..130296 + 750 WP_224556817.1 IclR family transcriptional regulator -
LOE39_RS19885 (LOE39_19875) 130336..131319 - 984 WP_037930317.1 HTH-type transcriptional regulator CdhR VF
LOE39_RS19890 (LOE39_19880) 131431..132681 + 1251 WP_224556816.1 sarcosine oxidase subunit beta family protein -
LOE39_RS19895 (LOE39_19885) 132692..132988 + 297 WP_028957964.1 sarcosine oxidase subunit delta -
LOE39_RS19900 (LOE39_19890) 132985..135930 + 2946 WP_224556814.1 sarcosine oxidase subunit alpha family protein -
LOE39_RS19905 (LOE39_19895) 135923..136477 + 555 WP_224556812.1 sarcosine oxidase subunit gamma -
LOE39_RS19910 (LOE39_19900) 136580..137461 + 882 WP_224556810.1 formyltetrahydrofolate deformylase -
LOE39_RS19915 (LOE39_19905) 138057..138980 + 924 WP_224556808.1 zincin-like metallopeptidase domain-containing protein -
LOE39_RS19920 (LOE39_19910) 139085..139474 + 390 WP_224556806.1 DUF3768 domain-containing protein -
LOE39_RS19925 (LOE39_19915) 139678..140709 + 1032 WP_224558028.1 IS110 family transposase ISRhru3 Transposase
LOE39_RS19930 (LOE39_19920) 141173..143155 + 1983 WP_090525078.1 ParB/RepB/Spo0J family partition protein -
LOE39_RS19935 (LOE39_19925) 143229..143789 + 561 WP_224557983.1 regulator -
LOE39_RS19940 (LOE39_19930) 143789..144442 + 654 WP_224557984.1 hypothetical protein -
LOE39_RS19945 (LOE39_19935) 144566..144892 + 327 WP_224557985.1 type II toxin-antitoxin system PrlF family antitoxin -
LOE39_RS19950 (LOE39_19940) 144889..145407 + 519 Protein_140 type II toxin-antitoxin system YhaV family toxin -
LOE39_RS19955 (LOE39_19945) 146330..146554 + 225 WP_108693368.1 transcriptional regulator/antitoxin MazE -
LOE39_RS19960 (LOE39_19950) 146551..146946 + 396 WP_224557987.1 type II toxin-antitoxin system death-on-curing family toxin -
LOE39_RS19965 (LOE39_19955) 147083..147406 + 324 Protein_143 methylase -
LOE39_RS19970 (LOE39_19960) 147508..148616 + 1109 Protein_144 IS110 family transposase ISSfr2 Transposase
LOE39_RS19975 (LOE39_19965) 148908..149810 + 903 Protein_145 methyltransferase -
LOE39_RS19980 (LOE39_19970) 150069..150437 - 369 WP_008327368.1 hypothetical protein -
LOE39_RS19985 (LOE39_19975) 150649..150900 + 252 WP_224557941.1 hypothetical protein -
LOE39_RS19990 (LOE39_19980) 150974..151978 - 1005 WP_224557933.1 alpha/beta hydrolase family protein -
LOE39_RS19995 (LOE39_19985) 151991..153682 - 1692 WP_224557934.1 hypothetical protein -
LOE39_RS20000 (LOE39_19990) 153822..154103 + 282 WP_224557935.1 hypothetical protein -
LOE39_RS20005 (LOE39_19995) 154201..154935 + 735 WP_224557936.1 hypothetical protein -
LOE39_RS20010 (LOE39_20000) 155218..156246 + 1029 WP_224557937.1 IS30 family transposase ISRssp4 Transposase
LOE39_RS20015 (LOE39_20005) 156268..156744 - 477 WP_224557938.1 MarR family transcriptional regulator -
LOE39_RS20020 (LOE39_20010) 157196..158002 - 807 WP_051539349.1 Beta-barrel assembly-enhancing protease VF
LOE39_RS20025 (LOE39_20015) 158049..159824 - 1776 WP_224557939.1 pilus assembly protein TadG-related protein -
LOE39_RS20030 (LOE39_20020) 159814..160236 - 423 WP_224557940.1 pilus assembly protein -
LOE39_RS20035 (LOE39_20025) 160233..161183 - 951 WP_229939089.1 type II secretion system F family protein -
LOE39_RS20040 (LOE39_20030) 161185..162153 - 969 WP_224557982.1 hypothetical protein VF
LOE39_RS20045 (LOE39_20035) 162150..163430 - 1281 WP_229940641.1 Putative conjugal transfer protein VF
LOE39_RS20050 (LOE39_20040) 163684..164925 - 1242 WP_224557981.1 hypothetical protein -
LOE39_RS20055 (LOE39_20045) 164947..165486 - 540 WP_224557980.1 CpaD family pilus assembly protein -
LOE39_RS20060 (LOE39_20050) 165592..166842 - 1251 WP_229940642.1 putative type IV piliation system protein VF
LOE39_RS20065 (LOE39_20055) 166864..167784 - 921 WP_229940643.1 Flp pilus assembly protein CpaB -
LOE39_RS20070 (LOE39_20060) 167830..168018 - 189 WP_224558006.1 Flp family type IVb pilin -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance