MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 62117 bp
Accession: NZ_CP086776 Location: 1..62117 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-69 Replicon: plasmid P1
Accession: NZ_CP086776 Location: 1..62117 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-69 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE40_RS19125 (LOE40_19110) | 1..559 | - | 559 | WP_230040053.1 | pyrroloquinoline-quinone synthase PqqC | - |
| LOE40_RS19130 (LOE40_19115) | 556..1443 | - | 888 | WP_224556905.1 | pyrroloquinoline quinone biosynthesis protein PqqB | - |
| LOE40_RS19135 (LOE40_19120) | 1457..1564 | - | 108 | WP_224556908.1 | pyrroloquinoline quinone precursor peptide PqqA | - |
| LOE40_RS19140 (LOE40_19125) | 1735..2130 | + | 396 | WP_224556911.1 | cytochrome c family protein | - |
| LOE40_RS19145 (LOE40_19130) | 2144..2665 | + | 522 | WP_224556913.1 | carbon monoxide dehydrogenase subunit G | - |
| LOE40_RS19150 (LOE40_19135) | 2967..3854 | - | 888 | WP_224556916.1 | LysR family transcriptional regulator | - |
| LOE40_RS19155 (LOE40_19140) | 3955..4566 | + | 612 | WP_224556921.1 | glutathione transferase GstA | - |
| LOE40_RS19160 (LOE40_19145) | 4563..4943 | + | 381 | WP_224556923.1 | nuclear transport factor 2 family protein | - |
| LOE40_RS19165 (LOE40_19150) | 4947..5165 | + | 219 | WP_224556926.1 | 4-oxalocrotonate tautomerase family protein | - |
| LOE40_RS19170 (LOE40_19155) | 5546..7027 | - | 1482 | WP_224556929.1 | sodium:solute symporter family protein | - |
| LOE40_RS19175 (LOE40_19160) | 7024..7209 | - | 186 | WP_224556932.1 | hypothetical protein | - |
| LOE40_RS19180 (LOE40_19165) | 7326..7949 | - | 624 | WP_224556935.1 | isochorismatase family protein | - |
| LOE40_RS19185 (LOE40_19170) | 7971..9002 | - | 1032 | WP_224556938.1 | leucyl aminopeptidase | - |
| LOE40_RS19190 (LOE40_19175) | 9030..9812 | - | 783 | WP_224556941.1 | alpha/beta hydrolase | - |
| LOE40_RS19195 (LOE40_19180) | 9824..10525 | - | 702 | WP_224557001.1 | maleate isomerase | - |
| LOE40_RS19200 (LOE40_19185) | 10686..11354 | - | 669 | WP_224556944.1 | HTH-type transcriptional repressor | VF |
| LOE40_RS19205 (LOE40_19190) | 11362..11826 | - | 465 | WP_224556946.1 | MarR family transcriptional regulator | - |
| LOE40_RS19210 (LOE40_19195) | 12122..12634 | + | 513 | WP_224556948.1 | (2Fe-2S)-binding protein | - |
| LOE40_RS19215 (LOE40_19200) | 12631..16044 | + | 3414 | WP_224556949.1 | molybdopterin-dependent oxidoreductase | - |
| LOE40_RS19220 (LOE40_19205) | 16238..17371 | + | 1134 | WP_224557003.1 | FAD-dependent monooxygenase | - |
| LOE40_RS19225 (LOE40_19210) | 17359..17495 | - | 137 | Protein_20 | IS481 family transposase | - |
| LOE40_RS19230 (LOE40_19215) | 17547..19214 | - | 1668 | WP_224556950.1 | sulfatase-like hydrolase/transferase | - |
| LOE40_RS19235 (LOE40_19220) | 19277..19633 | - | 357 | WP_224556951.1 | hypothetical protein | - |
| LOE40_RS19240 (LOE40_19225) | 19875..20366 | - | 492 | WP_224557005.1 | 3-keto-5-aminohexanoate cleavage protein | - |
| LOE40_RS19245 (LOE40_19230) | 20532..21476 | + | 945 | Protein_24 | IS110 family transposase ISWpi13 | Transposase |
| LOE40_RS19250 (LOE40_19235) | 21477..22388 | + | 912 | Protein_25 | IS3 family transposase ISXau3 | Transposase |
| LOE40_RS19255 (LOE40_19240) | 23020..23271 | + | 252 | WP_224556953.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| LOE40_RS19260 (LOE40_19245) | 23268..23534 | + | 267 | WP_224556955.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LOE40_RS19265 | 23595..24413 | - | 819 | WP_229940646.1 | hypothetical protein | - |
| LOE40_RS19270 (LOE40_19255) | 24504..25207 | + | 704 | Protein_29 | IS6 family transposase ISRH1 | Transposase |
| LOE40_RS19275 (LOE40_19260) | 25425..26306 | - | 882 | WP_224556958.1 | zinc-binding dehydrogenase | - |
| LOE40_RS19280 (LOE40_19265) | 28136..29191 | - | 1056 | WP_224556960.1 | plasmid replication protein RepC | - |
| LOE40_RS19285 (LOE40_19270) | 29430..30401 | - | 972 | WP_224556962.1 | plasmid partitioning protein RepB | - |
| LOE40_RS19290 (LOE40_19275) | 30401..31600 | - | 1200 | WP_037930394.1 | Cell division protein PomZ | VF |
| LOE40_RS19295 (LOE40_19280) | 32083..32241 | - | 159 | Protein_34 | short-chain dehydrogenase | - |
| LOE40_RS19300 (LOE40_19285) | 32329..33426 | - | 1098 | WP_229939103.1 | glycoside hydrolase family 88 protein | - |
| LOE40_RS19305 (LOE40_19290) | 33458..34525 | - | 1068 | WP_224556967.1 | TRAP transporter substrate-binding protein | - |
| LOE40_RS19310 (LOE40_19295) | 34833..35333 | + | 501 | WP_224556969.1 | TRAP transporter small permease | - |
| LOE40_RS19315 (LOE40_19300) | 35356..36663 | + | 1308 | WP_229939144.1 | TRAP transporter large permease | - |
| LOE40_RS19320 (LOE40_19305) | 36677..37417 | + | 741 | WP_224556975.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| LOE40_RS19325 (LOE40_19310) | 37422..38438 | - | 1017 | WP_224556977.1 | LacI family DNA-binding transcriptional regulator | - |
| LOE40_RS19330 (LOE40_19315) | 38681..39517 | + | 837 | WP_224556979.1 | 5-dehydro-4-deoxy-D-glucuronate isomerase | - |
| LOE40_RS19335 (LOE40_19320) | 39521..41980 | + | 2460 | WP_224556981.1 | hypothetical protein | - |
| LOE40_RS19340 (LOE40_19325) | 42458..43048 | + | 591 | Protein_43 | NAD(P)H-dependent oxidoreductase | - |
| LOE40_RS22835 | 43140..43262 | + | 123 | WP_269140185.1 | hypothetical protein | - |
| LOE40_RS19345 (LOE40_19330) | 43765..44649 | + | 885 | WP_224556983.1 | DUF1403 family protein | - |
| LOE40_RS19350 (LOE40_19335) | 44652..45266 | + | 615 | WP_224556984.1 | SMC-Scp complex subunit ScpB | - |
| LOE40_RS19355 (LOE40_19340) | 45367..45582 | + | 216 | WP_224556986.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LOE40_RS19360 (LOE40_19345) | 45609..46112 | + | 504 | WP_224556988.1 | type II toxin-antitoxin system VapC family toxin | - |
| LOE40_RS19365 (LOE40_19350) | 46006..46718 | + | 713 | Protein_49 | IS6 family transposase | - |
| LOE40_RS19370 (LOE40_19355) | 47004..47177 | - | 174 | WP_229939113.1 | DDE-type integrase/transposase/recombinase | - |
| LOE40_RS19375 (LOE40_19360) | 48952..49341 | - | 390 | WP_224556990.1 | helix-turn-helix domain-containing protein | - |
| LOE40_RS19380 (LOE40_19365) | 49762..49866 | + | 105 | WP_229939115.1 | hypothetical protein | - |
| LOE40_RS19385 | 49976..50278 | - | 303 | WP_224556991.1 | hypothetical protein | - |
| LOE40_RS19390 (LOE40_19370) | 50393..51277 | + | 885 | WP_224556992.1 | DUF1403 family protein | - |
| LOE40_RS19395 (LOE40_19375) | 51280..51873 | + | 594 | WP_224556993.1 | SMC-Scp complex subunit ScpB | - |
| LOE40_RS19400 (LOE40_19380) | 52159..52437 | + | 279 | WP_229939064.1 | IS66 family transposase ISSme3 | Transposase |
| LOE40_RS19405 (LOE40_19385) | 52434..52781 | + | 348 | WP_224558021.1 | IS66 family transposase ISAzs18 | Transposase |
| LOE40_RS19410 (LOE40_19390) | 52860..54385 | + | 1526 | Protein_58 | IS66 family transposase ISAzs18 | Transposase |
| LOE40_RS19415 (LOE40_19395) | 54325..55571 | - | 1247 | Protein_59 | IS3 family transposase ISGxy1 | Transposase |
| LOE40_RS19420 (LOE40_19400) | 55654..55812 | - | 159 | WP_224557998.1 | IS110 family transposase ISMdi12 | Transposase |
| LOE40_RS19425 (LOE40_19405) | 56501..57459 | - | 959 | Protein_61 | IS481 family transposase ISNwi5 | Transposase |
| LOE40_RS19430 (LOE40_19410) | 57442..58269 | + | 828 | WP_224557999.1 | AAA family ATPase | - |
| LOE40_RS19435 (LOE40_19415) | 58214..59428 | + | 1215 | WP_224558000.1 | IS256 family transposase ISPa1328 | Transposase |
| LOE40_RS19440 (LOE40_19420) | 59682..61222 | + | 1541 | Protein_64 | IS21 family transposase ISFK1 | Transposase |
| LOE40_RS19445 (LOE40_19425) | 61237..62001 | + | 765 | WP_224558013.1 | IS21 family transposase ISFK1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|