MGE detailed information
MGE type: Genomic_island MGE length: 62580 bp
Accession: NZ_CP086624 Location: 61259..123838 Organism: Escherichia coli strain RIVM_C037791 Replicon: chromosome
Accession: NZ_CP086624 Location: 61259..123838 Organism: Escherichia coli strain RIVM_C037791 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN354_RS00240 (59359) | 59359..61056 | - | 1698 | WP_001176835.1 | HilA family transcriptional regulator EilA | - |
| LN354_RS00245 (61259) | 61259..62608 | - | 1350 | WP_000608464.1 | Cell invasion protein SipD | VF |
| LN354_RS00250 (62652) | 62652..63782 | - | 1131 | WP_000183751.1 | hypothetical protein | - |
| LN354_RS00255 (63795) | 63795..65576 | - | 1782 | WP_001551889.1 | YopB/SseC family type III secretion system translocon subunit | - |
| LN354_RS00260 (65632) | 65632..65814 | - | 183 | WP_001551887.1 | hypothetical protein | - |
| LN354_RS00265 (65824) | 65824..66321 | - | 498 | WP_000443168.1 | Chaperone protein SicA | VF |
| LN354_RS00270 (66623) | 66623..66916 | - | 294 | WP_001306625.1 | protein YicS | - |
| LN354_RS00275 (67126) | 67126..67944 | + | 819 | WP_000779408.1 | Lipoprotein 28 | VF |
| LN354_RS00280 (67948) | 67948..68871 | - | 924 | WP_000535949.1 | carboxylate/amino acid/amine transporter | - |
| LN354_RS00285 (68982) | 68982..70166 | - | 1185 | WP_001172876.1 | sugar efflux transporter | - |
| LN354_RS00290 (70571) | 70571..70776 | - | 206 | Protein_57 | RhuM family protein | - |
| LN354_RS00295 (70960) | 70960..71802 | - | 843 | WP_001274548.1 | DUF4942 domain-containing protein | - |
| LN354_RS00300 (71887) | 71887..72084 | - | 198 | WP_000772035.1 | DUF957 domain-containing protein | - |
| LN354_RS00305 (72096) | 72096..72587 | - | 492 | WP_000976825.1 | DUF5983 family protein | - |
| LN354_RS00310 (72584) | 72584..72958 | - | 375 | WP_000854775.1 | TA system toxin CbtA family protein | Toxin Detail |
| LN354_RS00315 (73048) | 73048..73416 | - | 369 | WP_001285645.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LN354_RS00320 (73427) | 73427..73579 | - | 153 | WP_000488333.1 | hypothetical protein | - |
| LN354_RS00325 (73579) | 73579..73800 | - | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| LN354_RS00330 (73869) | 73869..74345 | - | 477 | WP_001318130.1 | RadC family protein | - |
| LN354_RS00335 (74361) | 74361..74846 | - | 486 | WP_000213721.1 | antirestriction protein | - |
| LN354_RS00340 (74938) | 74938..75756 | - | 819 | WP_001175173.1 | DUF932 domain-containing protein | - |
| LN354_RS00345 (75846) | 75846..76079 | - | 234 | WP_001278284.1 | DUF905 family protein | - |
| LN354_RS00350 (76085) | 76085..76762 | - | 678 | WP_001097567.1 | hypothetical protein | - |
| LN354_RS00355 (76913) | 76913..77593 | - | 681 | WP_001282911.1 | WYL domain-containing protein | - |
| LN354_RS00360 (77796) | 77796..78680 | - | 885 | WP_000010385.1 | YfjP family GTPase | - |
| LN354_RS00365 (78674) | 78674..78868 | + | 195 | WP_001304548.1 | hypothetical protein | - |
| LN354_RS00370 (78889) | 78889..79926 | - | 1038 | WP_226452266.1 | hypothetical protein | - |
| LN354_RS00375 (81560) | 81560..82291 | + | 732 | WP_001075477.1 | inovirus Gp2 family protein | - |
| LN354_RS00380 (82511) | 82511..82669 | - | 159 | WP_000902356.1 | hypothetical protein | - |
| LN354_RS00385 (82675) | 82675..83247 | + | 573 | WP_001536434.1 | hypothetical protein | - |
| LN354_RS00390 (83316) | 83316..83546 | + | 231 | WP_000958491.1 | AlpA family transcriptional regulator | - |
| LN354_RS00395 (83819) | 83819..84367 | + | 549 | WP_001167448.1 | hypothetical protein | - |
| LN354_RS00400 (84369) | 84369..84845 | - | 477 | WP_000258199.1 | ProQ/FinO family protein | - |
| LN354_RS00405 (85170) | 85170..85397 | + | 228 | WP_155522400.1 | hypothetical protein | - |
| LN354_RS00410 (85916) | 85916..86539 | + | 624 | WP_001536432.1 | hypothetical protein | - |
| LN354_RS00415 (86636) | 86636..86869 | + | 234 | WP_000124171.1 | hypothetical protein | - |
| LN354_RS00420 (86922) | 86922..87113 | - | 192 | WP_001424022.1 | DUF4222 domain-containing protein | - |
| LN354_RS00425 (87620) | 87620..88066 | + | 447 | WP_001407729.1 | hypothetical protein | VF |
| LN354_RS00430 (88574) | 88574..88855 | + | 282 | WP_000989356.1 | PerC family transcriptional regulator | - |
| LN354_RS00435 (88861) | 88861..89053 | + | 193 | Protein_86 | integrase | - |
| LN354_RS00440 (89237) | 89237..89941 | + | 705 | WP_000022949.1 | hypothetical protein | - |
| LN354_RS00445 (89942) | 89942..90484 | + | 543 | WP_000875105.1 | ImmA/IrrE family metallo-endopeptidase | - |
| LN354_RS00450 (90545) | 90545..91516 | + | 972 | WP_001526463.1 | beta family protein | - |
| LN354_RS00455 (91502) | 91502..92167 | - | 666 | WP_225090932.1 | sce7726 family protein | - |
| LN354_RS00460 (92622) | 92622..92873 | - | 252 | WP_187560010.1 | hypothetical protein | - |
| LN354_RS00465 (93400) | 93400..96813 | + | 3414 | WP_060624813.1 | DEAD/DEAH box helicase family protein | - |
| LN354_RS00470 (96877) | 96877..98511 | + | 1635 | WP_000627733.1 | class I SAM-dependent DNA methyltransferase | - |
| LN354_RS00475 (98508) | 98508..99698 | + | 1191 | WP_001277856.1 | restriction endonuclease subunit S | - |
| LN354_RS00480 (99695) | 99695..101386 | + | 1692 | WP_000707066.1 | AAA family ATPase | - |
| LN354_RS00485 (101376) | 101376..102062 | + | 687 | WP_075827262.1 | HNH endonuclease | - |
| LN354_RS00495 (102972) | 102972..103769 | + | 798 | WP_032495517.1 | Beta-lactamase OXA-10 | ARG |
| LN354_RS00500 (104071) | 104071..104583 | - | 513 | Protein_99 | substrate binding domain-containing protein | - |
| LN354_RS00510 (106155) | 106155..106859 | - | 705 | WP_060624742.1 | DUF4365 domain-containing protein | - |
| LN354_RS00515 (107175) | 107175..107354 | - | 180 | Protein_102 | integrase | - |
| LN354_RS00520 (107584) | 107584..108330 | + | 747 | WP_001536427.1 | invasion outer membrane protein Tia | - |
| LN354_RS00525 (108683) | 108683..109300 | + | 618 | WP_000383016.1 | membrane protein | - |
| LN354_RS00530 (109311) | 109311..111026 | + | 1716 | WP_001379612.1 | hypothetical protein | - |
| LN354_RS00535 (110998) | 110998..112731 | + | 1734 | WP_000434627.1 | dynamin family protein | - |
| LN354_RS00540 (113110) | 113110..114783 | + | 1674 | WP_060624739.1 | sulfatase-like hydrolase/transferase | - |
| LN354_RS00545 (114925) | 114925..115968 | - | 1044 | WP_000999866.1 | hypothetical protein | - |
| LN354_RS00550 (116404) | 116404..117594 | - | 1191 | WP_001536423.1 | Prophage integrase IntS ; Integrase | Integrase |
| LN354_RS00560 (118280) | 118280..119662 | + | 1383 | WP_001551865.1 | glycoside-pentoside-hexuronide family transporter | - |
| LN354_RS00565 (119672) | 119672..121990 | + | 2319 | WP_001551861.1 | alpha-xylosidase | - |
| LN354_RS00570 (122285) | 122285..123838 | + | 1554 | WP_059332344.1 | PRD domain-containing protein | - |
| LN354_RS00575 (123865) | 123865..124335 | + | 471 | WP_001521621.1 | fructose PTS transporter subunit IIA | - |
| LN354_RS00580 (124353) | 124353..124667 | + | 315 | WP_001028074.1 | fructose PTS transporter subunit IIB | - |
| LN354_RS00585 (124692) | 124692..125783 | + | 1092 | WP_000662199.1 | PTS fructose transporter subunit IIC | - |
| LN354_RS00590 (125795) | 125795..126646 | + | 852 | WP_000457123.1 | class II fructose-bisphosphate aldolase family protein | - |
| LN354_RS00595 (126727) | 126727..127587 | + | 861 | WP_001551859.1 | ketose-bisphosphate aldolase | - |
| LN354_RS00600 (127635) | 127635..128567 | + | 933 | WP_001551858.1 | ROK family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|