MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP086622 Location: 4164641..4175399 Organism: Escherichia coli strain RIVM_C037884 Replicon: chromosome
Accession: NZ_CP086622 Location: 4164641..4175399 Organism: Escherichia coli strain RIVM_C037884 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN352_RS20345 (4159987) | 4159987..4160769 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LN352_RS20350 (4161085) | 4161085..4164294 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| LN352_RS20355 (4164641) | 4164641..4165111 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| LN352_RS20360 (4165108) | 4165108..4165210 | + | 103 | Protein_3995 | helix-turn-helix domain-containing protein | - |
| LN352_RS20365 (4165302) | 4165302..4165460 | + | 159 | Protein_3996 | integrase | - |
| LN352_RS20375 (4165665) | 4165665..4166918 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LN352_RS20380 (4166930) | 4166930..4168033 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LN352_RS20385 (4168321) | 4168321..4169376 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LN352_RS20390 (4169415) | 4169415..4169816 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (4170534) | 4170534..4170614 | - | 81 | NuclAT_10 | - | - |
| - (4170534) | 4170534..4170614 | - | 81 | NuclAT_10 | - | - |
| - (4170534) | 4170534..4170614 | - | 81 | NuclAT_10 | - | - |
| - (4170534) | 4170534..4170614 | - | 81 | NuclAT_10 | - | - |
| LN352_RS20395 (4169874) | 4169874..4171118 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LN352_RS20400 (4171210) | 4171210..4171668 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LN352_RS20405 (4171929) | 4171929..4173386 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LN352_RS20410 (4173443) | 4173443..4173795 | - | 353 | Protein_4004 | peptide chain release factor H | - |
| LN352_RS20415 (4173791) | 4173791..4173997 | - | 207 | Protein_4005 | RtcB family protein | - |
| LN352_RS20420 (4174243) | 4174243..4174695 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| LN352_RS20425 (4174705) | 4174705..4175103 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LN352_RS20430 (4175106) | 4175106..4175399 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LN352_RS20435 (4175451) | 4175451..4176506 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| LN352_RS20440 (4176577) | 4176577..4177362 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| LN352_RS20445 (4177334) | 4177334..4179046 | + | 1713 | Protein_4011 | flagellar biosynthesis protein FlhA | - |
| LN352_RS20450 (4179151) | 4179151..4179429 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LN352_RS20455 (4179422) | 4179422..4179778 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|