MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP086620 Location: 4133497..4144255 Organism: Escherichia coli strain RIVM_C039205 Replicon: chromosome
Accession: NZ_CP086620 Location: 4133497..4144255 Organism: Escherichia coli strain RIVM_C039205 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN351_RS20160 (4128843) | 4128843..4129625 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LN351_RS20165 (4129941) | 4129941..4133150 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| LN351_RS20170 (4133497) | 4133497..4133967 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| LN351_RS20175 (4133964) | 4133964..4134066 | + | 103 | Protein_3958 | helix-turn-helix domain-containing protein | - |
| LN351_RS20180 (4134158) | 4134158..4134316 | + | 159 | Protein_3959 | integrase | - |
| LN351_RS20190 (4134521) | 4134521..4135774 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LN351_RS20195 (4135786) | 4135786..4136889 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LN351_RS20200 (4137177) | 4137177..4138232 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LN351_RS20205 (4138271) | 4138271..4138672 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (4139390) | 4139390..4139470 | - | 81 | NuclAT_10 | - | - |
| - (4139390) | 4139390..4139470 | - | 81 | NuclAT_10 | - | - |
| - (4139390) | 4139390..4139470 | - | 81 | NuclAT_10 | - | - |
| - (4139390) | 4139390..4139470 | - | 81 | NuclAT_10 | - | - |
| LN351_RS20210 (4138730) | 4138730..4139974 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LN351_RS20215 (4140066) | 4140066..4140524 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LN351_RS20220 (4140785) | 4140785..4142242 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LN351_RS20225 (4142299) | 4142299..4142651 | - | 353 | Protein_3967 | peptide chain release factor H | - |
| LN351_RS20230 (4142647) | 4142647..4142853 | - | 207 | Protein_3968 | RtcB family protein | - |
| LN351_RS20235 (4143099) | 4143099..4143551 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| LN351_RS20240 (4143561) | 4143561..4143959 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LN351_RS20245 (4143962) | 4143962..4144255 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LN351_RS20250 (4144307) | 4144307..4145362 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| LN351_RS20255 (4145433) | 4145433..4146218 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| LN351_RS20260 (4146190) | 4146190..4147902 | + | 1713 | Protein_3974 | flagellar biosynthesis protein FlhA | - |
| LN351_RS20265 (4148007) | 4148007..4148285 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LN351_RS20270 (4148278) | 4148278..4148634 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|