MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 99465 bp
Accession: NZ_CP086512 Location: 1..99465 Organism: Escherichia coli strain Ec-050-T0 Replicon: plasmid pEc-050-T0_2
Accession: NZ_CP086512 Location: 1..99465 Organism: Escherichia coli strain Ec-050-T0 Replicon: plasmid pEc-050-T0_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN50_RS23925 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| LNN50_RS23930 (1263) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| LNN50_RS23935 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| LNN50_RS23940 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| LNN50_RS23945 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| LNN50_RS23950 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| LNN50_RS23955 (5504) | 5504..5928 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| LNN50_RS23960 (6210) | 6210..8180 | + | 1971 | WP_001496335.1 | Hemin receptor | VF |
| LNN50_RS23965 (8187) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| LNN50_RS23970 (9041) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| LNN50_RS23975 (9717) | 9717..10499 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| LNN50_RS23980 (10496) | 10496..11518 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| LNN50_RS23985 (11604) | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| LNN50_RS23990 (12598) | 12598..12972 | - | 375 | WP_024193849.1 | IS66 family transposase ISKpn24 | Transposase |
| LNN50_RS23995 (12997) | 12997..13701 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LNN50_RS24000 (13823) | 13823..14728 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| LNN50_RS24005 (14725) | 14725..15963 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| LNN50_RS24010 (15963) | 15963..16547 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| LNN50_RS24015 (17040) | 17040..17729 | - | 690 | Protein_18 | IS6 family transposase IS6100 | Transposase |
| LNN50_RS24020 (17777) | 17777..18481 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LNN50_RS24025 (18588) | 18588..19448 | + | 861 | WP_000557452.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| LNN50_RS24030 (19461) | 19461..20003 | + | 543 | WP_002063889.1 | AAA family ATPase | - |
| LNN50_RS24035 (20095) | 20095..21143 | + | 1049 | Protein_22 | IS3 family transposase ISKpn11 | Transposase |
| LNN50_RS24040 (21197) | 21197..21901 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LNN50_RS24045 (22066) | 22066..22359 | + | 294 | Protein_24 | IS30 family transposase | - |
| LNN50_RS24050 (22460) | 22460..23272 | + | 813 | WP_023408309.1 | Metallo-beta-lactamase type 2 | ARG |
| LNN50_RS24055 (23276) | 23276..23641 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| LNN50_RS24060 (23646) | 23646..24284 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| LNN50_RS24065 (24295) | 24295..24852 | - | 558 | Protein_28 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| LNN50_RS24070 (24952) | 24952..25326 | - | 375 | Protein_29 | protein-disulfide reductase DsbD family protein | - |
| LNN50_RS24075 (25639) | 25639..27180 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| LNN50_RS24080 (27585) | 27585..28424 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LNN50_RS24085 (28418) | 28418..28765 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LNN50_RS24090 (28882) | 28882..29720 | - | 839 | Protein_33 | Streptomycin 3''-adenylyltransferase | ARG |
| LNN50_RS24095 (29726) | 29726..30016 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| LNN50_RS24100 (30128) | 30128..30625 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| LNN50_RS24105 (30770) | 30770..31636 | + | 867 | Protein_36 | IS91 family transposase ISAzo26 | Transposase |
| LNN50_RS24110 (31691) | 31691..32395 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LNN50_RS24115 (32461) | 32461..33975 | + | 1515 | Protein_38 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LNN50_RS24120 (34017) | 34017..34259 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| LNN50_RS24125 (34291) | 34291..34941 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LNN50_RS24130 (35047) | 35047..36246 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| LNN50_RS24135 (36278) | 36278..37162 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| LNN50_RS24140 (37300) | 37300..37692 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LNN50_RS24145 (37696) | 37696..38445 | + | 750 | Protein_44 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LNN50_RS24150 (38469) | 38469..39074 | - | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LNN50_RS24155 (39169) | 39169..42066 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LNN50_RS24160 (42203) | 42203..42604 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| LNN50_RS24165 (42537) | 42537..42794 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| LNN50_RS24170 (42887) | 42887..43540 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| LNN50_RS24175 (43638) | 43638..43778 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| LNN50_RS24180 (44479) | 44479..45336 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| LNN50_RS24185 (45329) | 45329..45403 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| LNN50_RS24190 (45638) | 45638..45895 | - | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| LNN50_RS24195 (46300) | 46300..47322 | + | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
| LNN50_RS24200 (47794) | 47794..48147 | + | 354 | WP_000005489.1 | hypothetical protein | - |
| LNN50_RS24205 (48560) | 48560..49138 | - | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
| LNN50_RS24210 (49171) | 49171..49868 | + | 698 | WP_223230354.1 | IS1 family transposase IS1A | Transposase |
| LNN50_RS24215 (49983) | 49983..50339 | + | 357 | WP_000229735.1 | IS66 family transposase ISEc23 | Transposase |
| LNN50_RS24220 (50336) | 50336..50686 | + | 351 | WP_000624725.1 | IS66 family transposase ISEc47 | Transposase |
| LNN50_RS24225 (50717) | 50717..50938 | + | 222 | WP_000080227.1 | IS66 family transposase ISEc43 | Transposase |
| LNN50_RS24230 (50890) | 50890..51231 | + | 342 | Protein_61 | IS66 family transposase IS682 | Transposase |
| LNN50_RS24235 (51295) | 51295..51774 | - | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| LNN50_RS24240 (51855) | 51855..53258 | - | 1404 | WP_000514417.1 | YfcC family protein | - |
| LNN50_RS24245 (53306) | 53306..54310 | - | 1005 | WP_086625071.1 | Ornithine carbamoyltransferase | VF |
| LNN50_RS24250 (54395) | 54395..55306 | - | 912 | WP_000440183.1 | carbamate kinase | - |
| LNN50_RS24255 (55317) | 55317..56537 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
| LNN50_RS24260 (57244) | 57244..57858 | + | 615 | Protein_67 | VENN motif pre-toxin domain-containing protein | - |
| LNN50_RS24265 (57858) | 57858..58304 | - | 447 | Protein_68 | plasmid replication initiator RepA | - |
| LNN50_RS24270 (58297) | 58297..58371 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| LNN50_RS24275 (58607) | 58607..58864 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| LNN50_RS24280 (59148) | 59148..59297 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (59341) | 59341..59402 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (59341) | 59341..59402 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (59341) | 59341..59402 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (59341) | 59341..59402 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| LNN50_RS24285 (59541) | 59541..59723 | - | 183 | WP_000968309.1 | hypothetical protein | - |
| LNN50_RS24290 (59824) | 59824..60440 | + | 617 | Protein_73 | IS1-like element IS1A family transposase | - |
| LNN50_RS24295 (60478) | 60478..62049 | - | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
| LNN50_RS24300 (62069) | 62069..62416 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| LNN50_RS24305 (62416) | 62416..63093 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| LNN50_RS24310 (63148) | 63148..63237 | + | 90 | Protein_77 | IS1 family transposase | - |
| LNN50_RS24315 (63538) | 63538..63750 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| LNN50_RS24320 (63884) | 63884..64444 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| LNN50_RS24325 (64499) | 64499..65275 | - | 777 | WP_086625070.1 | conjugal transfer pilus acetylase TraX | - |
| LNN50_RS24330 (65214) | 65214..65384 | - | 171 | WP_086625069.1 | hypothetical protein | - |
| LNN50_RS24335 (65381) | 65381..65803 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| LNN50_RS24340 (65850) | 65850..66275 | - | 426 | WP_001546490.1 | antirestriction protein | - |
| LNN50_RS24345 (66689) | 66689..67459 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| LNN50_RS24350 (67504) | 67504..68022 | - | 519 | WP_223349485.1 | DUF1380 family protein | - |
| LNN50_RS24355 (67952) | 67952..68173 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| LNN50_RS24360 (68174) | 68174..68857 | - | 684 | WP_032181561.1 | DNA methylase | - |
| LNN50_RS24365 (68934) | 68934..69245 | - | 312 | WP_012615291.1 | hypothetical protein | - |
| LNN50_RS24370 (69242) | 69242..70144 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| LNN50_RS24375 (70882) | 70882..71853 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LNN50_RS24380 (71853) | 71853..73019 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| LNN50_RS24385 (73607) | 73607..74362 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| LNN50_RS24390 (75084) | 75084..75890 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| LNN50_RS24395 (75891) | 75891..76196 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LNN50_RS24400 (76198) | 76198..76416 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LNN50_RS24405 (76976) | 76976..77206 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LNN50_RS24410 (77203) | 77203..77619 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LNN50_RS24415 (77694) | 77694..79259 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| LNN50_RS24420 (79244) | 79244..80266 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| LNN50_RS24425 (80520) | 80520..81206 | - | 687 | Protein_100 | IS1 family transposase IS1S | Transposase |
| LNN50_RS24430 (81732) | 81732..83933 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| LNN50_RS24435 (83959) | 83959..85292 | - | 1334 | Protein_102 | L-lysine N6-monooxygenase | VF |
| LNN50_RS24440 (85289) | 85289..87031 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| LNN50_RS24445 (87031) | 87031..87978 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| LNN50_RS24450 (87979) | 87979..89703 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| LNN50_RS24455 (89839) | 89839..91032 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| LNN50_RS24460 (91412) | 91412..91792 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| LNN50_RS24465 (92133) | 92133..92546 | - | 414 | Protein_108 | phosphopyruvate hydratase | - |
| LNN50_RS24470 (92544) | 92544..92801 | + | 258 | Protein_109 | Tn3 family transposase | - |
| LNN50_RS24475 (93035) | 93035..93892 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| LNN50_RS24480 (93889) | 93889..94746 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| LNN50_RS24485 (94743) | 94743..95570 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| LNN50_RS24490 (95570) | 95570..96484 | - | 915 | WP_000949005.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| LNN50_RS24495 (96840) | 96840..97537 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| LNN50_RS24500 (97717) | 97717..98230 | - | 514 | Protein_115 | DUF4113 domain-containing protein | - |
| LNN50_RS24505 (98291) | 98291..98395 | - | 105 | Protein_116 | AAA family ATPase | - |
| LNN50_RS24510 (98397) | 98397..98720 | - | 324 | Protein_117 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|