MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94446 bp
Accession: NZ_CP086384 Location: 1..94446 Organism: Deinococcus radiophilus strain ATCC 27603 Replicon: plasmid pRadio3
Accession: NZ_CP086384 Location: 1..94446 Organism: Deinococcus radiophilus strain ATCC 27603 Replicon: plasmid pRadio3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMT64_RS13435 (LMT64_13430) | 2030..3418 | - | 1389 | WP_126352295.1 | ATP-binding protein | - |
| LMT64_RS13440 (LMT64_13435) | 3415..4536 | - | 1122 | WP_126352294.1 | HigA family addiction module antitoxin | - |
| LMT64_RS13445 (LMT64_13440) | 4526..4828 | - | 303 | WP_126352293.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LMT64_RS13450 (LMT64_13445) | 4969..6846 | - | 1878 | WP_126352292.1 | DUF262 domain-containing protein | - |
| LMT64_RS13455 (LMT64_13450) | 6843..8000 | - | 1158 | WP_229253594.1 | restriction endonuclease subunit S | - |
| LMT64_RS13460 (LMT64_13455) | 7997..10423 | - | 2427 | WP_126352290.1 | class I SAM-dependent DNA methyltransferase | - |
| LMT64_RS13465 (LMT64_13460) | 10580..15079 | - | 4500 | WP_229253595.1 | DUF3883 domain-containing protein | - |
| LMT64_RS13470 (LMT64_13465) | 15170..16228 | - | 1059 | WP_170166000.1 | zinc ribbon domain-containing protein | - |
| LMT64_RS13475 (LMT64_13470) | 16376..16609 | + | 234 | WP_126352287.1 | hypothetical protein | - |
| LMT64_RS13480 (LMT64_13475) | 17044..17436 | - | 393 | WP_126352286.1 | hypothetical protein | - |
| LMT64_RS13485 (LMT64_13480) | 17518..18894 | + | 1377 | WP_126352285.1 | hypothetical protein | - |
| LMT64_RS13490 (LMT64_13485) | 18872..19336 | - | 465 | WP_229253596.1 | hypothetical protein | - |
| LMT64_RS13495 (LMT64_13490) | 19308..20234 | - | 927 | WP_229253597.1 | replication initiator protein A | - |
| LMT64_RS13500 (LMT64_13495) | 20619..20807 | - | 189 | WP_126352283.1 | DUF6283 family protein | - |
| LMT64_RS13505 (LMT64_13500) | 20822..21193 | + | 372 | WP_126352282.1 | hypothetical protein | - |
| LMT64_RS13510 (LMT64_13505) | 21266..21724 | - | 459 | WP_229253598.1 | hypothetical protein | - |
| LMT64_RS13515 (LMT64_13510) | 21895..23187 | - | 1293 | WP_211334188.1 | RNA-guided endonuclease IscB | - |
| LMT64_RS13520 (LMT64_13515) | 23389..23631 | - | 243 | WP_229253599.1 | hypothetical protein | - |
| LMT64_RS13525 (LMT64_13520) | 23662..24099 | - | 438 | WP_126352281.1 | hypothetical protein | - |
| LMT64_RS13530 (LMT64_13525) | 24199..24624 | - | 426 | WP_013615908.1 | hypothetical protein | - |
| LMT64_RS13535 (LMT64_13530) | 24656..25654 | - | 999 | WP_013615907.1 | hypothetical protein | - |
| LMT64_RS13540 (LMT64_13535) | 25642..25992 | - | 351 | WP_013615906.1 | hypothetical protein | - |
| LMT64_RS13545 (LMT64_13540) | 26020..26493 | - | 474 | WP_013615905.1 | hypothetical protein | - |
| LMT64_RS13555 (LMT64_13550) | 27453..27698 | + | 246 | WP_013615903.1 | DUF2171 domain-containing protein | - |
| LMT64_RS13560 (LMT64_13555) | 27764..28096 | + | 333 | WP_041223109.1 | YnfA family protein | - |
| LMT64_RS13565 (LMT64_13560) | 28098..28529 | - | 432 | WP_013615901.1 | hypothetical protein | - |
| LMT64_RS13570 (LMT64_13565) | 28516..28917 | - | 402 | WP_013615900.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LMT64_RS13575 (LMT64_13570) | 28914..29582 | - | 669 | WP_013615899.1 | SCO family protein | - |
| LMT64_RS13580 (LMT64_13575) | 29579..30484 | - | 906 | WP_013615898.1 | cation diffusion facilitator family transporter | - |
| LMT64_RS13585 (LMT64_13580) | 30477..30743 | - | 267 | WP_013615897.1 | glutaredoxin family protein | - |
| LMT64_RS13590 (LMT64_13585) | 30759..31358 | - | 600 | WP_013615896.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| LMT64_RS13595 (LMT64_13590) | 31360..33546 | - | 2187 | WP_013615895.1 | Zinc/cadmium/lead-transporting P-type ATPase | VF |
| LMT64_RS13600 (LMT64_13595) | 33594..34244 | + | 651 | WP_229253601.1 | thioredoxin domain-containing protein | - |
| LMT64_RS13605 (LMT64_13600) | 34407..34826 | - | 420 | WP_229253602.1 | IS5 family transposase ISAzs16 | Transposase |
| LMT64_RS13610 (LMT64_13605) | 34894..35193 | + | 300 | WP_083801594.1 | IS3 family transposase ISDds1 | Transposase |
| LMT64_RS13615 (LMT64_13610) | 35497..35847 | - | 351 | Protein_37 | IS701 family transposase ISDge5 | Transposase |
| LMT64_RS13625 (LMT64_13620) | 37410..37649 | - | 240 | WP_229253603.1 | winged helix-turn-helix domain-containing protein | - |
| LMT64_RS13630 (LMT64_13625) | 37725..38708 | - | 984 | WP_126353712.1 | IS4 family transposase ISDra1 | Transposase |
| LMT64_RS13635 (LMT64_13630) | 39167..39931 | - | 765 | Protein_41 | IS701 family transposase ISDge5 | Transposase |
| LMT64_RS13640 (LMT64_13635) | 40038..40394 | + | 357 | WP_041223069.1 | competence protein CoiA family protein | - |
| LMT64_RS13645 (LMT64_13640) | 40391..41368 | + | 978 | WP_126353438.1 | hypothetical protein | - |
| LMT64_RS13650 (LMT64_13645) | 41394..42029 | - | 636 | WP_013615892.1 | RES family NAD+ phosphorylase | - |
| LMT64_RS13655 (LMT64_13650) | 42026..42421 | - | 396 | WP_229253604.1 | DUF2384 domain-containing protein | - |
| LMT64_RS13660 (LMT64_13655) | 42590..42868 | - | 279 | WP_126353442.1 | hypothetical protein | - |
| LMT64_RS13665 (LMT64_13660) | 42865..43407 | - | 543 | WP_211334205.1 | hypothetical protein | - |
| LMT64_RS13670 (LMT64_13665) | 43882..44439 | + | 558 | WP_126353444.1 | hypothetical protein | - |
| LMT64_RS13675 (LMT64_13670) | 44432..45568 | + | 1137 | WP_126353446.1 | hypothetical protein | - |
| LMT64_RS13680 (LMT64_13675) | 45613..46617 | - | 1005 | WP_126353448.1 | hypothetical protein | - |
| LMT64_RS13685 (LMT64_13680) | 46708..47427 | - | 720 | WP_126353450.1 | hypothetical protein | - |
| LMT64_RS13690 (LMT64_13685) | 47417..49957 | - | 2541 | WP_126353452.1 | class I SAM-dependent DNA methyltransferase | - |
| LMT64_RS13695 (LMT64_13690) | 50536..50904 | - | 369 | WP_169310663.1 | IS630 family transposase ISTth6 | Transposase |
| LMT64_RS13700 (LMT64_13695) | 51080..51343 | - | 264 | WP_126353526.1 | hypothetical protein | - |
| LMT64_RS14215 | 51667..51795 | - | 129 | WP_267869790.1 | hypothetical protein | - |
| LMT64_RS13705 (LMT64_13700) | 52024..52704 | - | 681 | WP_126353528.1 | hypothetical protein | - |
| LMT64_RS13710 (LMT64_13705) | 52748..52990 | - | 243 | WP_126353530.1 | hypothetical protein | - |
| LMT64_RS13715 (LMT64_13710) | 52981..53442 | - | 462 | WP_229253580.1 | hypothetical protein | - |
| LMT64_RS13720 (LMT64_13715) | 53483..54412 | - | 930 | WP_229253581.1 | hypothetical protein | - |
| LMT64_RS13725 (LMT64_13720) | 54519..54722 | - | 204 | WP_126353534.1 | hypothetical protein | - |
| LMT64_RS13730 (LMT64_13725) | 54719..55315 | - | 597 | WP_229253582.1 | hypothetical protein | - |
| LMT64_RS13735 (LMT64_13730) | 55312..55680 | - | 369 | WP_126353537.1 | hypothetical protein | - |
| LMT64_RS13740 (LMT64_13735) | 55790..56359 | - | 570 | WP_126353539.1 | hypothetical protein | - |
| LMT64_RS13745 (LMT64_13740) | 56359..57312 | - | 954 | WP_229253583.1 | hypothetical protein | - |
| LMT64_RS13750 (LMT64_13745) | 57406..57699 | + | 294 | WP_126353541.1 | antitoxin | Antitoxin Detail |
| LMT64_RS13755 (LMT64_13750) | 57711..58043 | + | 333 | WP_126353547.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LMT64_RS13760 (LMT64_13755) | 58253..58459 | - | 207 | WP_229253584.1 | hypothetical protein | - |
| LMT64_RS13765 (LMT64_13760) | 58472..58759 | + | 288 | WP_126352309.1 | IS3 family transposase ISSsp2 | Transposase |
| LMT64_RS13770 (LMT64_13765) | 58762..59631 | + | 870 | WP_229253585.1 | integrase core domain-containing protein | - |
| LMT64_RS13775 (LMT64_13770) | 59580..59984 | - | 405 | WP_229253586.1 | GNAT family N-acetyltransferase | - |
| LMT64_RS13780 (LMT64_13775) | 59981..60184 | - | 204 | WP_126353344.1 | hypothetical protein | - |
| LMT64_RS13785 (LMT64_13780) | 60398..61039 | - | 642 | WP_229253587.1 | CAP domain-containing protein | - |
| LMT64_RS13790 (LMT64_13785) | 61426..61803 | - | 378 | WP_126353340.1 | hypothetical protein | - |
| LMT64_RS13795 (LMT64_13790) | 61844..62206 | - | 363 | WP_229253588.1 | hypothetical protein | - |
| LMT64_RS13800 (LMT64_13795) | 62369..62608 | - | 240 | WP_126353336.1 | hypothetical protein | - |
| LMT64_RS13805 (LMT64_13800) | 63009..63857 | - | 849 | WP_013616019.1 | IS5 family transposase ISMac15 | Transposase |
| LMT64_RS13810 (LMT64_13805) | 64549..64770 | + | 222 | WP_126353334.1 | hypothetical protein | - |
| LMT64_RS13815 (LMT64_13810) | 64767..65141 | + | 375 | WP_126353332.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| LMT64_RS13820 (LMT64_13815) | 65670..67139 | + | 1470 | WP_126353330.1 | 5'-nucleotidase C-terminal domain-containing protein | - |
| LMT64_RS13825 (LMT64_13820) | 68110..69477 | - | 1368 | WP_126353328.1 | replication initiator protein A | - |
| LMT64_RS13830 (LMT64_13825) | 69798..70724 | - | 927 | WP_126353326.1 | ParB/RepB/Spo0J family partition protein | - |
| LMT64_RS13835 (LMT64_13830) | 70721..71494 | - | 774 | WP_126353324.1 | Chromosome partitioning protein ParA | VF |
| LMT64_RS13840 (LMT64_13835) | 72107..73060 | + | 954 | WP_126353322.1 | DNA/RNA non-specific endonuclease | - |
| LMT64_RS13845 (LMT64_13840) | 73104..73253 | - | 150 | WP_170166060.1 | hypothetical protein | - |
| LMT64_RS13850 (LMT64_13845) | 73277..73864 | - | 588 | WP_229253589.1 | IS3 family transposase ISDsp4 | Transposase |
| LMT64_RS13855 (LMT64_13850) | 73852..74145 | - | 294 | WP_229253590.1 | hypothetical protein | - |
| LMT64_RS13860 (LMT64_13855) | 74148..74435 | - | 288 | WP_126352309.1 | IS3 family transposase ISSsp2 | Transposase |
| LMT64_RS13865 (LMT64_13860) | 74502..75296 | - | 795 | WP_126352308.1 | DUF6454 family protein | - |
| LMT64_RS13870 (LMT64_13865) | 75370..76587 | - | 1218 | WP_229253591.1 | DUF790 family protein | - |
| LMT64_RS13875 (LMT64_13870) | 76574..77944 | - | 1371 | WP_126352315.1 | DEAD/DEAH box helicase | - |
| LMT64_RS13880 (LMT64_13875) | 77983..78222 | - | 240 | WP_126352306.1 | hypothetical protein | - |
| LMT64_RS13885 (LMT64_13880) | 78302..78751 | - | 450 | WP_126352305.1 | hypothetical protein | - |
| LMT64_RS13890 (LMT64_13885) | 78863..80005 | - | 1143 | WP_126352304.1 | HNH endonuclease domain-containing protein | - |
| LMT64_RS13895 (LMT64_13890) | 80023..80277 | - | 255 | WP_126352303.1 | hypothetical protein | - |
| LMT64_RS13900 (LMT64_13895) | 80482..81485 | - | 1004 | Protein_95 | IS4 family transposase ISDge11 | Transposase |
| LMT64_RS13905 (LMT64_13900) | 81889..84246 | - | 2358 | WP_126352302.1 | copper-translocating P-type ATPase | - |
| LMT64_RS13910 (LMT64_13905) | 84302..85399 | - | 1098 | WP_013616039.1 | Signal transduction histidine-protein kinase BaeS | VF |
| LMT64_RS13915 (LMT64_13910) | 85403..86068 | - | 666 | WP_013616038.1 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | VF |
| LMT64_RS13920 (LMT64_13915) | 86092..86766 | - | 675 | WP_013616037.1 | DUF305 domain-containing protein | - |
| LMT64_RS13925 (LMT64_13920) | 86822..87825 | - | 1004 | Protein_100 | IS4 family transposase ISDge11 | Transposase |
| LMT64_RS13930 (LMT64_13925) | 87967..88275 | - | 309 | WP_229253592.1 | hypothetical protein | - |
| LMT64_RS13935 (LMT64_13930) | 88347..88631 | - | 285 | WP_229253605.1 | hypothetical protein | - |
| LMT64_RS13940 (LMT64_13935) | 88527..89467 | + | 941 | Protein_103 | IS4 family transposase ISDra1 | Transposase |
| LMT64_RS13945 (LMT64_13940) | 89510..90016 | - | 507 | WP_126352300.1 | hypothetical protein | - |
| LMT64_RS13950 (LMT64_13945) | 90328..91062 | - | 735 | WP_126352299.1 | competence protein CoiA family protein | - |
| LMT64_RS13955 (LMT64_13950) | 91059..92606 | - | 1548 | WP_170166002.1 | UvrD-helicase domain-containing protein | - |
| LMT64_RS13960 (LMT64_13955) | 92680..93396 | - | 717 | WP_126352297.1 | SprT family zinc-dependent metalloprotease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|