MGE detailed information
MGE type: Genomic_island MGE length: 11452 bp
Accession: NZ_CP086334 Location: 3992227..4003678 Organism: Escherichia coli strain EBJ003 Replicon: chromosome
Accession: NZ_CP086334 Location: 3992227..4003678 Organism: Escherichia coli strain EBJ003 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5N12_RS19340 (3987228) | 3987228..3987662 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| C5N12_RS19345 (3987680) | 3987680..3988558 | - | 879 | WP_001298314.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| C5N12_RS19350 (3988548) | 3988548..3989327 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| C5N12_RS19355 (3989338) | 3989338..3989811 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C5N12_RS19360 (3989834) | 3989834..3991114 | - | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| C5N12_RS19365 (3991363) | 3991363..3992172 | + | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| C5N12_RS19370 (3992227) | 3992227..3992691 | - | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| C5N12_RS19375 (3992691) | 3992691..3993026 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| C5N12_RS19380 (3993175) | 3993175..3994746 | - | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| C5N12_RS19385 (3995121) | 3995121..3996455 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| C5N12_RS19390 (3996471) | 3996471..3997241 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| C5N12_RS19395 (3997271) | 3997271..3998161 | + | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| C5N12_RS19400 (3998258) | 3998258..3999403 | + | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| C5N12_RS19410 (4000203) | 4000203..4001390 | - | 1188 | WP_105313487.1 | YhaC family protein | - |
| C5N12_RS19415 (4001412) | 4001412..4001951 | - | 540 | WP_000675749.1 | protein YhaB | - |
| C5N12_RS19420 (4002207) | 4002207..4002425 | - | 219 | WP_171866797.1 | transcriptional activator TdcR | - |
| C5N12_RS19425 (4002740) | 4002740..4003678 | + | 939 | WP_105313488.1 | transcriptional regulator TdcA | - |
| C5N12_RS19430 (4003777) | 4003777..4004766 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| C5N12_RS19435 (4004788) | 4004788..4006119 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| C5N12_RS19440 (4006145) | 4006145..4007353 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|