MGE detailed information
MGE type: Prophage MGE length: 61384 bp
Accession: NZ_CP085798 Location: 2207469..2268852 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Latias Replicon: chromosome
Accession: NZ_CP085798 Location: 2207469..2268852 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Latias Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF55_RS10910 () | 2203198..2203656 | + | 459 | WP_000156284.1 | DUF986 family protein | - |
| LJF55_RS10915 () | 2204066..2204632 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| LJF55_RS10920 () | 2204629..2205438 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LJF55_RS10925 () | 2205504..2207249 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LJF55_RS10930 () | 2207469..2207678 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LJF55_RS10935 () | 2207691..2207834 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LJF55_RS10940 () | 2208483..2208770 | - | 288 | WP_001000660.1 | YebO family protein | - |
| LJF55_RS10945 () | 2208841..2208984 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LJF55_RS10950 () | 2209142..2209381 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| LJF55_RS10955 () | 2209593..2210384 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| LJF55_RS10960 () | 2210560..2211933 | + | 1374 | WP_000416139.1 | MFS transporter | - |
| LJF55_RS10965 () | 2211981..2212862 | - | 882 | WP_050949494.1 | protease HtpX | - |
| LJF55_RS10970 () | 2213056..2215104 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LJF55_RS10975 () | 2215124..2215810 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LJF55_RS10980 () | 2215908..2216405 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LJF55_RS10985 () | 2216534..2217817 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| LJF55_RS10990 () | 2217786..2220419 | + | 2634 | WP_001529852.1 | hypothetical protein | VF |
| LJF55_RS10995 () | 2220497..2221936 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF55_RS11000 () | 2222054..2222290 | + | 237 | WP_024131108.1 | YebV family protein | - |
| LJF55_RS11005 () | 2222401..2222592 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF55_RS11010 () | 2222611..2223261 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| LJF55_RS11015 () | 2223485..2223649 | - | 165 | WP_001134856.1 | membrane protein | - |
| LJF55_RS11020 () | 2223934..2224656 | - | 723 | WP_000182071.1 | hypothetical protein | VF |
| LJF55_RS11025 () | 2225340..2225735 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LJF55_RS11030 () | 2226065..2226541 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| LJF55_RS11035 () | 2226914..2227333 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| LJF55_RS11040 () | 2227706..2227975 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| LJF55_RS11045 () | 2228141..2228281 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| LJF55_RS11050 () | 2228427..2229634 | - | 1208 | Protein_2157 | IS256 family transposase ISEc39 | Transposase |
| LJF55_RS11055 () | 2229704..2230170 | + | 467 | Protein_2158 | tyrosine-type recombinase/integrase | - |
| LJF55_RS11060 () | 2231420..2232334 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| LJF55_RS11065 () | 2232467..2232625 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF55_RS11070 () | 2232635..2233249 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| LJF55_RS11075 () | 2233576..2233808 | - | 233 | Protein_2162 | helix-turn-helix domain-containing protein | - |
| LJF55_RS11080 () | 2234417..2234518 | - | 102 | Protein_2163 | arsenic transporter | - |
| LJF55_RS11085 () | 2234509..2234689 | + | 181 | Protein_2164 | IS3 family transposase | - |
| LJF55_RS11090 () | 2235079..2235279 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| LJF55_RS11095 () | 2235376..2235887 | - | 512 | Protein_2166 | tail fiber assembly protein | - |
| LJF55_RS22985 () | 2235900..2236187 | - | 288 | Protein_2167 | macro domain-containing protein | - |
| LJF55_RS11100 () | 2236197..2237428 | - | 1232 | Protein_2168 | tail fiber protein | - |
| LJF55_RS11105 () | 2237427..2237994 | - | 568 | Protein_2169 | phage terminase large subunit family protein | - |
| LJF55_RS11110 () | 2237981..2238472 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| LJF55_RS11115 () | 2238527..2238715 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| LJF55_RS11120 () | 2238780..2238947 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF55_RS11125 () | 2239204..2239737 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| LJF55_RS11130 () | 2239791..2239982 | - | 192 | Protein_2174 | glycoside hydrolase family 19 protein | - |
| LJF55_RS11135 () | 2239971..2240432 | + | 462 | Protein_2175 | DNA breaking-rejoining protein | - |
| LJF55_RS11140 () | 2240696..2241618 | + | 923 | Protein_2176 | hypothetical protein ; Integrase | Integrase |
| LJF55_RS11145 () | 2242563..2243363 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| LJF55_RS11150 () | 2243392..2243633 | - | 242 | Protein_2178 | recombinase family protein | - |
| LJF55_RS11155 () | 2243843..2244565 | + | 723 | WP_000161704.1 | hypothetical protein | VF |
| LJF55_RS11160 () | 2244767..2245111 | - | 345 | Protein_2180 | tail fiber assembly protein | - |
| LJF55_RS11165 () | 2245116..2245979 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| LJF55_RS11170 () | 2246019..2248350 | - | 2332 | Protein_2182 | host specificity protein J | - |
| LJF55_RS11175 () | 2248350..2248610 | - | 261 | Protein_2183 | C40 family peptidase | - |
| LJF55_RS11180 () | 2248620..2249315 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| LJF55_RS11185 () | 2249405..2249938 | + | 534 | WP_000877926.1 | hypothetical protein | VF |
| LJF55_RS11190 () | 2250055..2250282 | - | 228 | Protein_2186 | outer membrane beta-barrel protein | - |
| LJF55_RS11195 () | 2250314..2250625 | - | 312 | Protein_2187 | DUF1441 family protein | - |
| LJF55_RS22990 () | 2250833..2251312 | - | 480 | WP_001541990.1 | lysis protein | - |
| LJF55_RS11210 () | 2251330..2251782 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| LJF55_RS11215 () | 2251766..2252095 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| LJF55_RS11220 () | 2252371..2253057 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| LJF55_RS11225 () | 2253418..2253867 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| LJF55_RS11230 () | 2254241..2254768 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| LJF55_RS11235 () | 2254862..2255551 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| LJF55_RS11240 () | 2255548..2255684 | - | 137 | Protein_2195 | YlcG family protein | - |
| LJF55_RS23035 () | 2255681..2255902 | - | 222 | WP_254888507.1 | recombination protein NinG | - |
| LJF55_RS11250 () | 2255905..2256504 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| LJF55_RS11255 () | 2256568..2256786 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| LJF55_RS11260 () | 2257088..2257186 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| LJF55_RS11265 () | 2257505..2259484 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LJF55_RS11270 () | 2259898..2260176 | + | 279 | WP_001575998.1 | excisionase | - |
| LJF55_RS11275 () | 2260151..2261230 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 2261368..2261513 | + | 146 | - | - | Antitoxin Detail |
| - | 2261370..2261473 | - | 104 | - | - | Toxin Detail |
| LJF55_RS11280 () | 2261613..2261966 | - | 354 | WP_000722370.1 | YebY family protein | - |
| LJF55_RS11285 () | 2261983..2262858 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| LJF55_RS11290 () | 2262859..2263233 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJF55_RS11295 () | 2263371..2263601 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF55_RS11300 () | 2263709..2264365 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF55_RS11305 () | 2264389..2265087 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| LJF55_RS11310 () | 2265124..2267175 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LJF55_RS11315 () | 2267388..2268047 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| LJF55_RS11320 () | 2268141..2268494 | - | 354 | WP_001042123.1 | protein YebF | - |
| LJF55_RS11325 () | 2268562..2268852 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJF55_RS11330 () | 2268983..2270161 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF55_RS11335 () | 2270261..2270902 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LJF55_RS11340 () | 2270940..2272751 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|