MGE detailed information
MGE type: Genomic_island MGE length: 11562 bp
Accession: NZ_CP085488 Location: 582705..594266 Organism: Escherichia coli strain VCSW8 Replicon: chromosome
Accession: NZ_CP085488 Location: 582705..594266 Organism: Escherichia coli strain VCSW8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJY68_RS02825 (577706) | 577706..578140 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| LJY68_RS02830 (578158) | 578158..579036 | - | 879 | WP_001355782.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| LJY68_RS02835 (579026) | 579026..579805 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| LJY68_RS02840 (579816) | 579816..580289 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LJY68_RS02845 (580312) | 580312..581592 | - | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LJY68_RS02850 (581841) | 581841..582650 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| LJY68_RS02855 (582705) | 582705..583169 | - | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LJY68_RS02860 (583169) | 583169..583504 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LJY68_RS02865 (583653) | 583653..585224 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| LJY68_RS02870 (585599) | 585599..586933 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LJY68_RS02875 (586949) | 586949..587719 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LJY68_RS02880 (587749) | 587749..588639 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LJY68_RS02885 (588736) | 588736..589881 | + | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| LJY68_RS02895 (590791) | 590791..591978 | - | 1188 | WP_038996070.1 | YhaC family protein | - |
| LJY68_RS02900 (592000) | 592000..592539 | - | 540 | WP_000675746.1 | protein YhaB | - |
| LJY68_RS02905 (592795) | 592795..593013 | - | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| LJY68_RS02910 (593328) | 593328..594266 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LJY68_RS02915 (594365) | 594365..595354 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LJY68_RS02920 (595376) | 595376..596707 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| LJY68_RS02925 (596733) | 596733..597941 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|