MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 105694 bp
Accession: NZ_CP085161 Location: 1..105694 Organism: Pseudosulfitobacter sp. DSM 107133 Replicon: plasmid pDSM107133_g
Accession: NZ_CP085161 Location: 1..105694 Organism: Pseudosulfitobacter sp. DSM 107133 Replicon: plasmid pDSM107133_g
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSM107133_RS23960 (DSM107133_04817) | 1..1212 | + | 1212 | WP_064225041.1 | Sporulation initiation inhibitor protein Soj | VF |
| DSM107133_RS23965 (DSM107133_04818) | 1316..2311 | + | 996 | WP_064225040.1 | plasmid partitioning protein RepB | - |
| DSM107133_RS23970 (DSM107133_04819) | 2472..3752 | + | 1281 | WP_064225039.1 | plasmid replication protein RepC | - |
| DSM107133_RS23975 (DSM107133_04820) | 3808..4065 | + | 258 | WP_064225038.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DSM107133_RS23980 (DSM107133_04821) | 4062..4397 | + | 336 | WP_064225037.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSM107133_RS23985 (DSM107133_04822) | 4404..5519 | - | 1116 | WP_065331088.1 | tyrosine-type recombinase/integrase | - |
| DSM107133_RS23990 (DSM107133_04823) | 5685..7331 | + | 1647 | WP_114295578.1 | Mu transposase C-terminal domain-containing protein | - |
| DSM107133_RS23995 (DSM107133_04824) | 7324..8202 | + | 879 | WP_114295321.1 | TniB family NTP-binding protein | - |
| DSM107133_RS24000 (DSM107133_04825) | 8274..9218 | + | 945 | WP_240310681.1 | TniQ family protein | - |
| DSM107133_RS24005 (DSM107133_04826) | 9424..10308 | + | 885 | WP_064225035.1 | DUF1403 family protein | - |
| DSM107133_RS24010 (DSM107133_04827) | 10311..10925 | + | 615 | WP_064225034.1 | SMC-Scp complex subunit ScpB | - |
| DSM107133_RS24015 (DSM107133_04828) | 11285..13519 | + | 2235 | WP_064225033.1 | AAA family ATPase | - |
| DSM107133_RS24020 (DSM107133_04829) | 13516..14223 | + | 708 | WP_240310675.1 | AAA family ATPase | - |
| DSM107133_RS24025 (DSM107133_04830) | 14223..14870 | + | 648 | WP_240310674.1 | hypothetical protein | - |
| DSM107133_RS24030 (DSM107133_04831) | 14884..15975 | - | 1092 | WP_082894843.1 | beta family protein | - |
| DSM107133_RS24035 (DSM107133_04832) | 15944..17272 | - | 1329 | WP_064225031.1 | XRE family transcriptional regulator | - |
| DSM107133_RS24040 (DSM107133_04833) | 17735..18073 | + | 339 | WP_064225030.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| DSM107133_RS24045 (DSM107133_04834) | 18066..19367 | + | 1302 | WP_064225029.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| DSM107133_RS24050 (DSM107133_04835) | 19446..20406 | - | 961 | Protein_18 | IS481 family transposase ISRel12 | Transposase |
| DSM107133_RS24055 (DSM107133_04836) | 20693..21874 | + | 1182 | WP_064225028.1 | DNA repair exonuclease | - |
| DSM107133_RS24060 (DSM107133_04837) | 21871..25287 | + | 3417 | WP_064225027.1 | AAA family ATPase | - |
| DSM107133_RS24065 (DSM107133_04838) | 25384..26235 | - | 852 | WP_082852112.1 | TniQ family protein | - |
| DSM107133_RS24070 (DSM107133_04839) | 26232..27113 | - | 882 | WP_067267035.1 | TniB family NTP-binding protein | - |
| DSM107133_RS24075 (DSM107133_04840) | 27126..28739 | - | 1614 | WP_107817728.1 | DDE-type integrase/transposase/recombinase | - |
| DSM107133_RS24080 (DSM107133_04841) | 28896..29504 | + | 609 | Protein_24 | IS3 family transposase ISMch1 | Transposase |
| DSM107133_RS24085 (DSM107133_04843) | 29651..30777 | + | 1127 | WP_240310525.1 | IS3 family transposase ISMch1 | Transposase |
| DSM107133_RS24090 (DSM107133_04844) | 30837..31175 | - | 339 | WP_067264464.1 | TetR family transcriptional regulator | - |
| DSM107133_RS24095 (DSM107133_04845) | 31343..32185 | + | 843 | WP_067264461.1 | metallophosphoesterase | - |
| DSM107133_RS24100 (DSM107133_04846) | 32231..33544 | + | 1314 | WP_114293606.1 | ABC transporter substrate-binding protein | - |
| DSM107133_RS24105 (DSM107133_04847) | 33607..34542 | + | 936 | WP_082852031.1 | sugar ABC transporter permease | - |
| DSM107133_RS24110 (DSM107133_04848) | 34532..35395 | + | 864 | WP_067263926.1 | carbohydrate ABC transporter permease | - |
| DSM107133_RS24115 (DSM107133_04849) | 35395..36138 | + | 744 | WP_067267189.1 | tyrosine-protein phosphatase | - |
| DSM107133_RS24120 (DSM107133_04850) | 36135..37241 | + | 1107 | WP_067264170.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| DSM107133_RS24125 (DSM107133_04851) | 37260..37643 | - | 384 | WP_067264167.1 | enoyl-CoA hydratase-related protein | - |
| DSM107133_RS24130 (DSM107133_04852) | 37713..38564 | - | 852 | WP_082852112.1 | TniQ family protein | - |
| DSM107133_RS24135 (DSM107133_04853) | 38561..39442 | - | 882 | WP_067267035.1 | TniB family NTP-binding protein | - |
| DSM107133_RS24140 (DSM107133_04854) | 39455..41068 | - | 1614 | WP_107817728.1 | DDE-type integrase/transposase/recombinase | - |
| DSM107133_RS24145 (DSM107133_04855) | 41351..42256 | - | 906 | WP_114295287.1 | hypothetical protein | - |
| DSM107133_RS24150 (DSM107133_04856) | 43387..43725 | + | 339 | WP_064225024.1 | DUF736 family protein | - |
| DSM107133_RS24155 (DSM107133_04858) | 44360..44536 | + | 177 | WP_235602448.1 | hypothetical protein | - |
| DSM107133_RS24160 (DSM107133_04859) | 44947..45669 | + | 723 | WP_233501446.1 | hypothetical protein | - |
| DSM107133_RS24165 (DSM107133_04860) | 45662..47578 | + | 1917 | WP_114295286.1 | T-DNA border endonuclease VirD2 | Relaxase |
| DSM107133_RS24170 (DSM107133_04861) | 47593..49506 | + | 1914 | WP_114295285.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DSM107133_RS24175 (DSM107133_04862) | 49525..50946 | - | 1422 | WP_064225048.1 | DUF2235 domain-containing protein | - |
| DSM107133_RS24180 (DSM107133_04863) | 51055..51777 | - | 723 | WP_064225022.1 | hypothetical protein | - |
| DSM107133_RS24185 (DSM107133_04864) | 51790..52689 | - | 900 | WP_064225021.1 | CBASS oligonucleotide cyclase | - |
| DSM107133_RS24190 (DSM107133_04865) | 52686..53189 | - | 504 | WP_064225020.1 | hypothetical protein | - |
| DSM107133_RS24195 (DSM107133_04866) | 53186..53656 | - | 471 | WP_064225019.1 | hypothetical protein | - |
| DSM107133_RS24200 (DSM107133_04867) | 53656..54561 | - | 906 | WP_064225018.1 | AAA family ATPase | - |
| DSM107133_RS24205 (DSM107133_04868) | 54743..55804 | + | 1062 | WP_064225017.1 | XRE family transcriptional regulator | - |
| DSM107133_RS24210 | 55842..56297 | + | 456 | WP_229737798.1 | hypothetical protein | - |
| DSM107133_RS24215 (DSM107133_04869) | 56450..57430 | - | 981 | WP_064225015.1 | Type IV secretion system protein VirB11 | VF |
| DSM107133_RS24220 (DSM107133_04870) | 57430..58854 | - | 1425 | WP_064225014.1 | Protein virB10 | VF |
| DSM107133_RS24225 (DSM107133_04871) | 58857..59579 | - | 723 | WP_064225013.1 | Type IV secretion system protein virB9 | VF |
| DSM107133_RS24230 (DSM107133_04872) | 59585..60265 | - | 681 | WP_064225012.1 | Type IV secretion system protein PtlE | VF |
| DSM107133_RS24235 (DSM107133_04873) | 60283..61296 | - | 1014 | WP_064225011.1 | hypothetical protein | VF |
| DSM107133_RS24240 (DSM107133_04874) | 61297..61722 | - | 426 | WP_233501452.1 | hypothetical protein | - |
| DSM107133_RS24245 (DSM107133_04875) | 61731..62498 | - | 768 | WP_064225010.1 | type IV secretion system protein | - |
| DSM107133_RS24250 (DSM107133_04876) | 62495..63607 | - | 1113 | WP_114295284.1 | transglycosylase SLT domain-containing protein | - |
| DSM107133_RS24255 (DSM107133_04877) | 63604..63813 | - | 210 | WP_082894842.1 | hypothetical protein | - |
| DSM107133_RS24260 (DSM107133_04878) | 63810..66239 | - | 2430 | WP_233501450.1 | type IV secretion system protein B4 | - |
| DSM107133_RS24265 (DSM107133_04879) | 66178..66456 | - | 279 | WP_037931006.1 | VirB3 family type IV secretion system protein | - |
| DSM107133_RS24270 (DSM107133_04880) | 66568..66849 | - | 282 | WP_009574106.1 | TrbC/VirB2 family protein | - |
| DSM107133_RS24275 (DSM107133_04881) | 66866..67423 | - | 558 | WP_037931001.1 | lytic transglycosylase domain-containing protein | - |
| DSM107133_RS24280 (DSM107133_04882) | 67503..67817 | - | 315 | WP_037930998.1 | hypothetical protein | - |
| DSM107133_RS24285 (DSM107133_04883) | 67950..68528 | + | 579 | WP_114295283.1 | hypothetical protein | - |
| DSM107133_RS24290 (DSM107133_04884) | 68522..68722 | - | 201 | WP_009804208.1 | hypothetical protein | - |
| DSM107133_RS24295 (DSM107133_04885) | 68788..69009 | - | 222 | WP_037930992.1 | helix-turn-helix transcriptional regulator | - |
| DSM107133_RS24300 (DSM107133_04886) | 69328..70527 | - | 1200 | WP_009804213.1 | 3-oxoadipyl-CoA thiolase | - |
| DSM107133_RS24305 (DSM107133_04887) | 70530..71450 | - | 921 | WP_009804214.1 | FAD-binding protein | - |
| DSM107133_RS24310 (DSM107133_04888) | 71450..72208 | - | 759 | WP_009804215.1 | electron transfer flavoprotein subunit beta/FixA family protein | - |
| DSM107133_RS24315 (DSM107133_04889) | 72285..73040 | - | 756 | WP_009804216.1 | Cyclopentanol dehydrogenase | VF |
| DSM107133_RS24320 (DSM107133_04890) | 73113..74750 | - | 1638 | WP_009804217.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| DSM107133_RS24325 (DSM107133_04891) | 74866..75768 | - | 903 | WP_017468330.1 | Monoterpene epsilon-lactone hydrolase | VF |
| DSM107133_RS24330 (DSM107133_04893) | 76056..77083 | + | 1028 | Protein_74 | IS110 family transposase ISMdi12 | Transposase |
| DSM107133_RS24335 | 77408..78171 | + | 764 | Protein_75 | IS5 family transposase ISPko1 | Transposase |
| DSM107133_RS24340 (DSM107133_04895) | 78144..80183 | - | 2040 | WP_037930989.1 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | - |
| DSM107133_RS24345 (DSM107133_04896) | 80192..81646 | - | 1455 | WP_224769585.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| DSM107133_RS24350 (DSM107133_04897) | 81818..82612 | + | 795 | WP_037930983.1 | IclR family transcriptional regulator | - |
| DSM107133_RS24355 (DSM107133_04898) | 82628..83788 | + | 1161 | WP_037930980.1 | acyl-CoA dehydrogenase family protein | - |
| DSM107133_RS24360 (DSM107133_04899) | 83807..84961 | + | 1155 | WP_037930977.1 | Long-chain-alcohol dehydrogenase 1 | VF |
| DSM107133_RS24365 (DSM107133_04900) | 84961..86163 | + | 1203 | WP_037930974.1 | CoA transferase | - |
| DSM107133_RS24370 (DSM107133_04901) | 86216..87097 | + | 882 | WP_227511477.1 | Right origin-binding protein | VF |
| DSM107133_RS24375 | 87171..87629 | + | 459 | WP_007120589.1 | acyl-CoA thioesterase | - |
| DSM107133_RS24380 (DSM107133_04902) | 87779..89950 | + | 2172 | WP_009804227.1 | ParB/RepB/Spo0J family partition protein | - |
| DSM107133_RS24385 (DSM107133_04903) | 90077..90457 | + | 381 | WP_009804228.1 | DUF3768 domain-containing protein | - |
| DSM107133_RS24390 (DSM107133_04904) | 90574..90870 | + | 297 | WP_009804229.1 | hypothetical protein | - |
| DSM107133_RS24395 (DSM107133_04905) | 90951..91334 | + | 384 | WP_009804230.1 | hypothetical protein | - |
| DSM107133_RS24400 (DSM107133_04906) | 91336..91812 | + | 477 | WP_037930962.1 | hypothetical protein | - |
| DSM107133_RS24405 (DSM107133_04907) | 91918..92547 | + | 630 | WP_037931030.1 | hypothetical protein | - |
| DSM107133_RS24410 (DSM107133_04909) | 93063..95354 | + | 2292 | Protein_90 | strawberry notch family protein | - |
| DSM107133_RS24415 | 95484..96488 | - | 1005 | WP_114293633.1 | tyrosine-type recombinase/integrase | - |
| DSM107133_RS24420 (DSM107133_04910) | 96485..97840 | - | 1356 | WP_114293634.1 | tyrosine-type recombinase/integrase | - |
| DSM107133_RS24425 (DSM107133_04911) | 97837..99066 | - | 1230 | WP_114293635.1 | Tyrosine recombinase XerD | VF |
| DSM107133_RS24430 (DSM107133_04912) | 99207..101315 | + | 2109 | Protein_94 | strawberry notch C-terminal domain-containing protein | - |
| DSM107133_RS24435 (DSM107133_04913) | 101312..102358 | + | 1047 | WP_064225045.1 | toprim domain-containing protein | - |
| DSM107133_RS24440 (DSM107133_04914) | 102657..103568 | + | 912 | WP_064225044.1 | DUF2493 domain-containing protein | - |
| DSM107133_RS24445 (DSM107133_04915) | 103577..103870 | - | 294 | WP_064225043.1 | helix-turn-helix domain-containing protein | - |
| DSM107133_RS24450 (DSM107133_04916) | 103867..104208 | - | 342 | WP_064225051.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSM107133_RS24455 (DSM107133_04917) | 104863..105201 | + | 339 | WP_064225042.1 | DUF736 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|