MGE detailed information
MGE type: Mobilizable plasmid MGE length: 47721 bp
Accession: NZ_CP085149 Location: 1..47721 Organism: Sulfitobacter dubius strain DSM 109990 Replicon: plasmid pDSM109990_e
Accession: NZ_CP085149 Location: 1..47721 Organism: Sulfitobacter dubius strain DSM 109990 Replicon: plasmid pDSM109990_e
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSM109990_RS20055 (DSM109990_04081) | 1..1026 | + | 1026 | WP_243263997.1 | replication initiator protein A | - |
| DSM109990_RS20060 (DSM109990_04082) | 1139..1813 | + | 675 | WP_243263998.1 | ParA family protein | - |
| DSM109990_RS20065 (DSM109990_04083) | 1813..2166 | + | 354 | WP_243263999.1 | hypothetical protein | - |
| DSM109990_RS20070 (DSM109990_04084) | 2204..2545 | + | 342 | WP_243264019.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSM109990_RS20075 (DSM109990_04085) | 2542..2832 | + | 291 | WP_243264000.1 | IS3 family transposase ISAeme20 | Transposase |
| DSM109990_RS20080 (DSM109990_04086) | 3027..3344 | + | 318 | WP_243264001.1 | hypothetical protein | - |
| DSM109990_RS20085 (DSM109990_04087) | 3325..4239 | + | 915 | WP_243264002.1 | hypothetical protein | - |
| DSM109990_RS20090 (DSM109990_04088) | 4239..4700 | + | 462 | WP_243264021.1 | hypothetical protein | - |
| DSM109990_RS20095 (DSM109990_04090) | 4940..6142 | - | 1203 | WP_243264003.1 | 3-oxoadipyl-CoA thiolase | - |
| DSM109990_RS20100 (DSM109990_04091) | 6306..8420 | + | 2115 | WP_243264004.1 | acetate--CoA ligase family protein | - |
| DSM109990_RS20105 (DSM109990_04092) | 8417..9337 | + | 921 | WP_243264005.1 | CoA-transferase | - |
| DSM109990_RS20110 (DSM109990_04093) | 9334..10095 | + | 762 | WP_243264006.1 | hypothetical protein | - |
| DSM109990_RS20115 (DSM109990_04094) | 10198..11352 | - | 1155 | WP_243264007.1 | Acyl-CoA dehydrogenase | VF |
| DSM109990_RS20120 (DSM109990_04095) | 11357..13339 | - | 1983 | WP_243264008.1 | biotin carboxylase N-terminal domain-containing protein | - |
| DSM109990_RS20125 (DSM109990_04096) | 13342..14874 | - | 1533 | WP_243264009.1 | carboxyl transferase domain-containing protein | - |
| DSM109990_RS20130 (DSM109990_04097) | 14871..15194 | - | 324 | WP_243264010.1 | hypothetical protein | - |
| DSM109990_RS20135 (DSM109990_04098) | 15191..16555 | - | 1365 | WP_243264011.1 | acyclic terpene utilization AtuA family protein | - |
| DSM109990_RS20140 (DSM109990_04099) | 16569..18536 | - | 1968 | WP_243264012.1 | TRAP transporter fused permease subunit | - |
| DSM109990_RS20145 (DSM109990_04100) | 18567..19529 | - | 963 | WP_243264013.1 | TAXI family TRAP transporter solute-binding subunit | - |
| DSM109990_RS20150 (DSM109990_04101) | 19740..20885 | - | 1146 | WP_243264014.1 | acyl-CoA dehydrogenase family protein | - |
| DSM109990_RS20155 (DSM109990_04102) | 20900..21364 | - | 465 | WP_243264015.1 | MaoC/PaaZ C-terminal domain-containing protein | - |
| DSM109990_RS20160 (DSM109990_04103) | 21485..22270 | + | 786 | WP_243264016.1 | enoyl-CoA hydratase-related protein | - |
| DSM109990_RS20165 (DSM109990_04104) | 22397..23194 | + | 798 | WP_243264017.1 | IclR family transcriptional regulator | - |
| DSM109990_RS20170 (DSM109990_04105) | 23187..24074 | + | 888 | WP_243264018.1 | helix-turn-helix domain-containing protein | - |
| DSM109990_RS20175 (DSM109990_04106) | 24071..24868 | + | 798 | WP_243263984.1 | enoyl-CoA hydratase-related protein | - |
| DSM109990_RS20180 (DSM109990_04107) | 24933..26165 | - | 1233 | WP_243263985.1 | hypothetical protein | - |
| DSM109990_RS20185 (DSM109990_04108) | 26617..27435 | + | 819 | WP_243263986.1 | enoyl-CoA hydratase/isomerase family protein | - |
| DSM109990_RS20190 (DSM109990_04109) | 27468..27668 | - | 201 | Protein_27 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| DSM109990_RS20195 (DSM109990_04110) | 27763..28371 | + | 609 | WP_036742596.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| DSM109990_RS20200 | 28403..28570 | + | 168 | Protein_29 | helix-turn-helix domain-containing protein | - |
| DSM109990_RS20205 (DSM109990_04111) | 28735..29670 | - | 936 | WP_231582226.1 | hypothetical protein | - |
| DSM109990_RS20210 (DSM109990_04112) | 29611..30477 | + | 867 | WP_047998256.1 | LysR family transcriptional regulator | - |
| DSM109990_RS20215 (DSM109990_04113) | 30734..31363 | + | 630 | WP_243263987.1 | IS91 family transposase ISMno24 | Transposase |
| DSM109990_RS20220 (DSM109990_04114) | 31369..31620 | + | 252 | WP_174861619.1 | WGR domain-containing protein | - |
| DSM109990_RS20225 (DSM109990_04115) | 31701..31964 | + | 264 | WP_174861618.1 | BrnT family toxin | Toxin Detail |
| DSM109990_RS20230 (DSM109990_04116) | 31951..32166 | + | 216 | WP_037931637.1 | hypothetical protein | Antitoxin Detail |
| DSM109990_RS20235 (DSM109990_04117) | 32197..32913 | - | 717 | WP_174861617.1 | SprT family zinc-dependent metalloprotease | - |
| DSM109990_RS20240 (DSM109990_04118) | 32910..36119 | - | 3210 | WP_243263988.1 | HsdR family type I site-specific deoxyribonuclease | - |
| DSM109990_RS20245 (DSM109990_04119) | 36116..36955 | - | 840 | WP_243263989.1 | DUF3800 domain-containing protein | - |
| DSM109990_RS20250 (DSM109990_04120) | 36952..38199 | - | 1248 | WP_243264020.1 | restriction endonuclease subunit S | - |
| DSM109990_RS20255 (DSM109990_04121) | 38192..39712 | - | 1521 | WP_243263990.1 | type I restriction-modification system subunit M | - |
| DSM109990_RS20260 (DSM109990_04122) | 39772..40077 | - | 306 | WP_243263991.1 | hypothetical protein | - |
| DSM109990_RS20265 (DSM109990_04123) | 40085..40762 | - | 678 | WP_243263992.1 | restriction endonuclease subunit S | - |
| DSM109990_RS20270 (DSM109990_04124) | 41054..41938 | - | 885 | WP_237273976.1 | zincin-like metallopeptidase domain-containing protein | - |
| DSM109990_RS20275 (DSM109990_04125) | 42428..42766 | + | 339 | WP_065334475.1 | hypothetical protein | - |
| DSM109990_RS20280 (DSM109990_04126) | 42756..44045 | - | 1290 | WP_243263993.1 | Mobilization protein A | Relaxase |
| DSM109990_RS20285 (DSM109990_04127) | 44689..45009 | + | 321 | WP_243263994.1 | mobilization protein | - |
| DSM109990_RS20290 (DSM109990_04128) | 45009..46664 | + | 1656 | WP_243263995.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DSM109990_RS20295 (DSM109990_04129) | 46683..47228 | + | 546 | WP_243263996.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|