MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 100217 bp
Accession: NZ_CP085076 Location: 1..100217 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: plasmid pNDM_2_P21_SE1_04.20
Accession: NZ_CP085076 Location: 1..100217 Organism: Escherichia coli strain P21_SE1_04.20 Replicon: plasmid pNDM_2_P21_SE1_04.20
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH372_RS24830 (LH372_24830) | 1..861 | + | 861 | WP_021546926.1 | replication protein RepA | - |
| LH372_RS24835 (LH372_24835) | 1261..2466 | + | 1206 | WP_000817632.1 | hypothetical protein | VF |
| LH372_RS24840 (LH372_24840) | 2463..3428 | + | 966 | WP_000725192.1 | ParB family protein | - |
| LH372_RS24845 (LH372_24845) | 3693..3917 | + | 225 | WP_094653748.1 | IS6 family transposase IS15 | Transposase |
| LH372_RS24850 (LH372_24850) | 3929..4633 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LH372_RS24855 (LH372_24855) | 4687..5199 | + | 513 | Protein_5 | BREX system P-loop protein BrxC | - |
| LH372_RS24860 (LH372_24860) | 5216..6979 | + | 1764 | WP_021546938.1 | DUF262 domain-containing protein | - |
| LH372_RS24865 (LH372_24865) | 6995..10624 | + | 3630 | WP_021546937.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| LH372_RS24870 (LH372_24870) | 10624..13281 | + | 2658 | WP_004011547.1 | BREX-1 system phosphatase PglZ type A | - |
| LH372_RS24875 (LH372_24875) | 13343..15388 | + | 2046 | WP_048659818.1 | protease Lon-related BREX system protein BrxL | - |
| LH372_RS24880 (LH372_24880) | 15496..15774 | - | 279 | Protein_10 | IS3 family transposase ISEc15 | Transposase |
| LH372_RS24885 (LH372_24885) | 16064..17068 | - | 1005 | WP_021546935.1 | IS110 family transposase IS4321R | Transposase |
| LH372_RS24890 (LH372_24890) | 17373..18070 | + | 698 | WP_224656898.1 | IS1 family transposase IS1X4 | Transposase |
| LH372_RS24895 (LH372_24895) | 18195..18629 | - | 435 | Protein_13 | GNAT family N-acetyltransferase | - |
| LH372_RS24900 (LH372_24900) | 18649..18894 | + | 246 | Protein_14 | IS3 family transposase ISEhe3 | Transposase |
| LH372_RS24905 (LH372_24905) | 18964..19668 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LH372_RS24910 (LH372_24910) | 19733..22903 | - | 3171 | Protein_16 | BREX system P-loop protein BrxC | - |
| LH372_RS24915 (LH372_24915) | 22922..23506 | - | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| LH372_RS24920 (LH372_24920) | 23503..24102 | - | 600 | WP_001021938.1 | DUF1819 family protein | - |
| LH372_RS24925 (LH372_24925) | 24112..25038 | - | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| LH372_RS24930 (LH372_24930) | 25107..25424 | - | 318 | WP_032156934.1 | hypothetical protein | - |
| LH372_RS24935 (LH372_24935) | 25648..25827 | + | 180 | WP_012600012.1 | hypothetical protein | - |
| LH372_RS24940 (LH372_24940) | 25859..26470 | - | 612 | Protein_22 | IS3 family transposase ISRaq1 | Transposase |
| LH372_RS24945 (LH372_24945) | 27217..27486 | + | 270 | WP_021546940.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| LH372_RS24950 (LH372_24950) | 27486..27764 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| LH372_RS24955 (LH372_24955) | 27810..28022 | + | 213 | Protein_25 | 3'-5' exonuclease | - |
| LH372_RS24960 (LH372_24960) | 28117..28353 | + | 237 | WP_223417154.1 | IS66 family transposase ISEc8 | Transposase |
| LH372_RS24965 (LH372_24965) | 28606..30156 | - | 1551 | Protein_27 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LH372_RS24970 (LH372_24970) | 30211..30915 | - | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| LH372_RS24975 (LH372_24975) | 31261..32070 | + | 810 | WP_000161640.1 | hypothetical protein | - |
| LH372_RS24980 (LH372_24980) | 32167..32769 | - | 603 | WP_001752951.1 | IS91 family transposase ISMno24 | Transposase |
| LH372_RS24985 (LH372_24985) | 32910..34340 | - | 1431 | WP_001460374.1 | hypothetical protein | - |
| LH372_RS24990 (LH372_24990) | 34957..36234 | - | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| LH372_RS24995 (LH372_24995) | 36298..38295 | - | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| LH372_RS25000 (LH372_25000) | 38547..38651 | - | 105 | Protein_34 | hypothetical protein | - |
| LH372_RS25005 (LH372_25005) | 38676..38915 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| LH372_RS25010 (LH372_25010) | 38915..39076 | + | 162 | Protein_36 | type II toxin-antitoxin system mRNA interferase RelE | - |
| LH372_RS25015 (LH372_25015) | 39211..39756 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| LH372_RS25020 (LH372_25020) | 39893..40465 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| LH372_RS25025 (LH372_25025) | 40502..41893 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| LH372_RS25030 (LH372_25030) | 41926..42354 | + | 429 | Protein_40 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LH372_RS25035 (LH372_25035) | 42673..43329 | - | 657 | WP_001516695.1 | hypothetical protein | ARG |
| LH372_RS25040 (LH372_25040) | 43724..44739 | + | 1016 | Protein_42 | IS3 family transposase ISEc36 | Transposase |
| LH372_RS25045 (LH372_25045) | 44782..47787 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LH372_RS25050 (LH372_25050) | 47951..48508 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LH372_RS25055 (LH372_25055) | 48691..49551 | + | 861 | WP_000027057.1 | hypothetical protein | ARG |
| LH372_RS25060 (LH372_25060) | 49721..50476 | + | 756 | WP_012372818.1 | hypothetical protein | ARG |
| LH372_RS25065 (LH372_25065) | 50557..51105 | - | 549 | WP_014342204.1 | cation:proton antiporter | - |
| LH372_RS25070 (LH372_25070) | 51168..51518 | + | 351 | Protein_48 | 60 kDa chaperonin | VF |
| LH372_RS25075 (LH372_25075) | 51712..52416 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LH372_RS25080 (LH372_25080) | 52581..52874 | + | 294 | Protein_50 | IS30 family transposase ISAba125 | Transposase |
| LH372_RS25085 (LH372_25085) | 52975..53787 | + | 813 | WP_023408309.1 | hypothetical protein | ARG |
| LH372_RS25090 (LH372_25090) | 53791..54156 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| LH372_RS25095 (LH372_25095) | 54161..54799 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| LH372_RS25100 (LH372_25100) | 54810..55367 | - | 558 | Protein_54 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| LH372_RS25105 (LH372_25105) | 55467..55841 | - | 375 | Protein_55 | protein-disulfide reductase DsbD family protein | - |
| LH372_RS25110 (LH372_25110) | 56154..57695 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| LH372_RS25115 (LH372_25115) | 58100..58939 | - | 840 | WP_000259031.1 | hypothetical protein | ARG |
| LH372_RS25120 (LH372_25120) | 58933..59280 | - | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| LH372_RS25125 (LH372_25125) | 59397..60235 | - | 839 | Protein_59 | hypothetical protein | ARG |
| LH372_RS25130 (LH372_25130) | 60241..60531 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| LH372_RS25135 (LH372_25135) | 60643..61140 | - | 498 | WP_001083725.1 | hypothetical protein | ARG |
| LH372_RS25140 (LH372_25140) | 61285..62151 | + | 867 | Protein_62 | IS91 family transposase ISAzo26 | Transposase |
| LH372_RS25145 (LH372_25145) | 62206..62910 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LH372_RS25150 (LH372_25150) | 62976..64490 | + | 1515 | Protein_64 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LH372_RS25155 (LH372_25155) | 64532..64774 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| LH372_RS25160 (LH372_25160) | 64806..65456 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LH372_RS25165 (LH372_25165) | 65562..66761 | + | 1200 | WP_000804064.1 | Multidrug resistance protein MdtG | ARG |
| LH372_RS25170 (LH372_25170) | 66793..67677 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| LH372_RS25175 (LH372_25175) | 67815..68207 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LH372_RS25180 (LH372_25180) | 68211..69962 | + | 1752 | Protein_70 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LH372_RS25185 (LH372_25185) | 70308..71285 | - | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| LH372_RS25195 (LH372_25195) | 72342..72635 | - | 294 | WP_063116710.1 | hypothetical protein | - |
| LH372_RS25200 (LH372_25200) | 72908..74626 | - | 1719 | WP_087760816.1 | hybrid sensor histidine kinase/response regulator | - |
| LH372_RS25205 (LH372_25205) | 74623..75111 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| LH372_RS25210 (LH372_25210) | 75104..76087 | - | 984 | WP_039267228.1 | hypothetical protein | - |
| LH372_RS25215 (LH372_25215) | 76091..77005 | - | 915 | WP_000891983.1 | helix-turn-helix domain-containing protein | - |
| LH372_RS25220 (LH372_25220) | 77319..77627 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| LH372_RS25225 (LH372_25225) | 77620..77835 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| LH372_RS25230 (LH372_25230) | 77838..78500 | + | 663 | WP_000958205.1 | hypothetical protein | VF |
| LH372_RS25235 (LH372_25235) | 78511..78810 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| LH372_RS25240 (LH372_25240) | 78820..81570 | + | 2751 | WP_048659795.1 | hypothetical protein | VF |
| LH372_RS25245 (LH372_25245) | 81589..82305 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| LH372_RS25250 (LH372_25250) | 82317..82601 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| LH372_RS25255 (LH372_25255) | 82619..83626 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| LH372_RS25260 (LH372_25260) | 83703..83843 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| LH372_RS25265 (LH372_25265) | 83836..84522 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| LH372_RS25270 (LH372_25270) | 84515..85408 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| LH372_RS25275 (LH372_25275) | 85405..86601 | + | 1197 | WP_000980841.1 | hypothetical protein | VF |
| LH372_RS25280 (LH372_25280) | 86605..87654 | + | 1050 | WP_000342114.1 | hypothetical protein | VF |
| LH372_RS25285 (LH372_25285) | 87641..88042 | + | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| LH372_RS25290 (LH372_25290) | 88133..88450 | + | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LH372_RS25295 (LH372_25295) | 88477..88812 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| LH372_RS25300 (LH372_25300) | 88788..89096 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| LH372_RS25305 (LH372_25305) | 89093..91294 | + | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| LH372_RS25310 (LH372_25310) | 91291..91683 | + | 393 | WP_001079960.1 | H-NS family nucleoid-associated regulatory protein | - |
| LH372_RS25315 (LH372_25315) | 92392..94299 | + | 1908 | WP_033546593.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LH372_RS25320 (LH372_25320) | 94314..95060 | + | 747 | WP_000909125.1 | MobC family replication-relaxation protein | - |
| LH372_RS25325 (LH372_25325) | 95053..95580 | + | 528 | WP_048659789.1 | Cardiolipin synthase B | VF |
| LH372_RS25330 (LH372_25330) | 95612..96043 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| LH372_RS25335 (LH372_25335) | 96175..96351 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| LH372_RS25340 (LH372_25340) | 96523..97488 | - | 966 | WP_023281075.1 | zincin-like metallopeptidase domain-containing protein | - |
| LH372_RS25345 (LH372_25345) | 97940..98050 | + | 111 | Protein_103 | peptidase | - |
| LH372_RS25350 (LH372_25350) | 98167..98355 | + | 189 | WP_048230572.1 | hypothetical protein | - |
| LH372_RS25355 (LH372_25355) | 98365..99564 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|