MGE detailed information
MGE type: Genomic_island MGE length: 11452 bp
Accession: NZ_CP085063 Location: 3944958..3956409 Organism: Escherichia coli strain P31_YH1_02.21 Replicon: chromosome
Accession: NZ_CP085063 Location: 3944958..3956409 Organism: Escherichia coli strain P31_YH1_02.21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH370_RS19000 (3939959) | 3939959..3940393 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| LH370_RS19005 (3940411) | 3940411..3941289 | - | 879 | WP_001298314.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| LH370_RS19010 (3941279) | 3941279..3942058 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| LH370_RS19015 (3942069) | 3942069..3942542 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LH370_RS19020 (3942565) | 3942565..3943845 | - | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LH370_RS19025 (3944094) | 3944094..3944903 | + | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| LH370_RS19030 (3944958) | 3944958..3945422 | - | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LH370_RS19035 (3945422) | 3945422..3945757 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LH370_RS19040 (3945906) | 3945906..3947477 | - | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| LH370_RS19045 (3947852) | 3947852..3949186 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LH370_RS19050 (3949202) | 3949202..3949972 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LH370_RS19055 (3950002) | 3950002..3950892 | + | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LH370_RS19060 (3950989) | 3950989..3952134 | + | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| LH370_RS19070 (3952934) | 3952934..3954121 | - | 1188 | WP_001521377.1 | YhaC family protein | - |
| LH370_RS19075 (3954143) | 3954143..3954682 | - | 540 | WP_000675749.1 | protein YhaB | - |
| LH370_RS19080 (3954938) | 3954938..3955156 | - | 219 | WP_171866797.1 | transcriptional activator TdcR | - |
| LH370_RS19085 (3955471) | 3955471..3956409 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LH370_RS19090 (3956508) | 3956508..3957497 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LH370_RS19095 (3957519) | 3957519..3958850 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| LH370_RS19100 (3958876) | 3958876..3960084 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|