MGE detailed information
MGE type: Prophage MGE length: 74620 bp
Accession: NZ_CP084898 Location: 2762234..2836853 Organism: Escherichia coli strain gw25 Replicon: chromosome
Accession: NZ_CP084898 Location: 2762234..2836853 Organism: Escherichia coli strain gw25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LHV65_RS13510 (2757870) | 2757870..2759531 | + | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| LHV65_RS13515 (2759680) | 2759680..2760021 | + | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| LHV65_RS13520 (2760083) | 2760083..2760373 | - | 291 | WP_001117838.1 | RnfH family protein | - |
| LHV65_RS13525 (2760363) | 2760363..2760800 | - | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| LHV65_RS13530 (2760971) | 2760971..2761453 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| LHV65_RS13540 (2762234) | 2762234..2763475 | + | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| LHV65_RS13545 (2763719) | 2763719..2764675 | - | 957 | WP_000510827.1 | protein YfjH | - |
| LHV65_RS13550 (2764719) | 2764719..2764931 | + | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| LHV65_RS13555 (2765060) | 2765060..2766469 | + | 1410 | WP_000481742.1 | YfjI family protein | - |
| LHV65_RS13560 (2766622) | 2766622..2767248 | + | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| LHV65_RS13565 (2767426) | 2767426..2769615 | - | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| LHV65_RS13570 (2769612) | 2769612..2771228 | - | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| LHV65_RS13575 (2771588) | 2771588..2771851 | - | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| LHV65_RS13580 (2771993) | 2771993..2773066 | + | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| LHV65_RS13585 (2773059) | 2773059..2773430 | + | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| LHV65_RS13590 (2773785) | 2773785..2774648 | + | 864 | WP_000787597.1 | GTPase family protein | - |
| LHV65_RS13595 (2774740) | 2774740..2775561 | + | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| LHV65_RS13600 (2775778) | 2775778..2776479 | + | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| LHV65_RS13605 (2776520) | 2776520..2776756 | + | 237 | WP_001144029.1 | protein YpjK | - |
| LHV65_RS13610 (2776756) | 2776756..2777199 | + | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| LHV65_RS13615 (2777223) | 2777223..2777690 | + | 468 | WP_000702495.1 | protein YfjT | - |
| LHV65_RS13620 (2778077) | 2778077..2778229 | - | 153 | Protein_2664 | arsenate reductase | - |
| LHV65_RS13625 (2778242) | 2778242..2779251 | - | 1010 | Protein_2665 | arsenic transporter | - |
| LHV65_RS13630 (2779393) | 2779393..2781096 | + | 1704 | WP_000896263.1 | protein YfjW | - |
| LHV65_RS13635 (2781668) | 2781668..2781891 | + | 224 | Protein_2667 | DUF905 domain-containing protein | - |
| LHV65_RS13640 (2781994) | 2781994..2782452 | + | 459 | WP_000211841.1 | antirestriction protein | - |
| LHV65_RS13645 (2782461) | 2782461..2782943 | + | 483 | WP_001407480.1 | RadC family protein | - |
| LHV65_RS13650 (2782952) | 2782952..2783152 | + | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| LHV65_RS13655 (2783190) | 2783190..2783507 | + | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LHV65_RS13660 (2783528) | 2783528..2783857 | + | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| LHV65_RS13665 (2784221) | 2784221..2788801 | - | 4581 | WP_010723187.1 | hypothetical protein | VF |
| LHV65_RS13670 (2788866) | 2788866..2788985 | - | 120 | WP_001120794.1 | hypothetical protein | - |
| LHV65_RS13675 (2789209) | 2789209..2789367 | - | 159 | Protein_2675 | recombinase family protein | - |
| LHV65_RS13680 (2789713) | 2789713..2791086 | - | 1374 | Protein_2676 | DUF5507 domain-containing protein | - |
| LHV65_RS13690 (2792472) | 2792472..2794724 | + | 2253 | Protein_2677 | alpha-amylase family glycosyl hydrolase | - |
| LHV65_RS13695 (2795060) | 2795060..2796037 | + | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| LHV65_RS13700 (2796057) | 2796057..2797325 | + | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| LHV65_RS13705 (2797348) | 2797348..2798796 | + | 1449 | WP_000772831.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| LHV65_RS13710 (2798810) | 2798810..2800090 | + | 1281 | WP_001087611.1 | hypothetical protein | VF |
| LHV65_RS13715 (2800328) | 2800328..2801728 | + | 1401 | WP_001295173.1 | GABA permease | - |
| LHV65_RS13720 (2801749) | 2801749..2802411 | + | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| LHV65_RS13725 (2802412) | 2802412..2802861 | - | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| LHV65_RS13730 (2802945) | 2802945..2803103 | - | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| LHV65_RS13735 (2803286) | 2803286..2803585 | + | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LHV65_RS13740 (2803595) | 2803595..2804119 | + | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| LHV65_RS13745 (2804166) | 2804166..2804570 | - | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| LHV65_RS13750 (2805239) | 2805239..2805688 | + | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| LHV65_RS13755 (2805725) | 2805725..2806069 | - | 345 | WP_000281320.1 | DUF2002 family protein | - |
| LHV65_RS13760 (2806221) | 2806221..2806550 | + | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| LHV65_RS13765 (2806798) | 2806798..2807043 | + | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| LHV65_RS13770 (2807040) | 2807040..2807450 | + | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| LHV65_RS13775 (2807423) | 2807423..2809567 | + | 2145 | WP_000246534.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| LHV65_RS13780 (2809577) | 2809577..2810536 | + | 960 | WP_000777969.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| LHV65_RS13785 (2810890) | 2810890..2812092 | + | 1203 | WP_000985494.1 | hypothetical protein | VF |
| LHV65_RS13790 (2812085) | 2812085..2813149 | + | 1065 | WP_000774988.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| LHV65_RS13795 (2813207) | 2813207..2814199 | + | 993 | WP_001216525.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| LHV65_RS13800 (2814391) | 2814391..2815568 | + | 1178 | Protein_2699 | MFS transporter | - |
| LHV65_RS13805 (2815692) | 2815692..2816429 | + | 738 | WP_000445651.1 | L-valine exporter subunit YgaZ | - |
| LHV65_RS13810 (2816419) | 2816419..2816754 | + | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| LHV65_RS13815 (2816845) | 2816845..2817375 | + | 531 | WP_000378442.1 | hypothetical protein | VF |
| LHV65_RS13820 (2817502) | 2817502..2818674 | + | 1173 | WP_001326681.1 | hypothetical protein | VF |
| LHV65_RS13825 (2818691) | 2818691..2820229 | + | 1539 | WP_001295176.1 | hypothetical protein | VF |
| LHV65_RS13830 (2820293) | 2820293..2820808 | - | 516 | WP_001130211.1 | hypothetical protein | VF |
| LHV65_RS13835 (2820958) | 2820958..2822514 | - | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| LHV65_RS13840 (2822587) | 2822587..2823015 | - | 429 | WP_001287454.1 | YqaA family protein | - |
| LHV65_RS13845 (2823012) | 2823012..2823578 | - | 567 | WP_000273290.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| LHV65_RS13875 (2825036) | 2825036..2825221 | - | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| LHV65_RS13880 (2825456) | 2825456..2828086 | - | 2631 | WP_000047184.1 | alanine--tRNA ligase | - |
| LHV65_RS13885 (2828214) | 2828214..2828714 | - | 501 | WP_000140508.1 | recombination regulator RecX | - |
| LHV65_RS13890 (2828783) | 2828783..2829844 | - | 1062 | WP_000963143.1 | recombinase RecA | - |
| LHV65_RS13895 (2829924) | 2829924..2830421 | - | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| LHV65_RS13900 (2830566) | 2830566..2831651 | - | 1086 | WP_001295177.1 | lytic murein transglycosylase B | - |
| LHV65_RS13905 (2831907) | 2831907..2832470 | + | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| LHV65_RS13910 (2832467) | 2832467..2833426 | + | 960 | WP_000148878.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| LHV65_RS13915 (2833437) | 2833437..2833808 | + | 372 | WP_000216194.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| LHV65_RS13920 (2833812) | 2833812..2834591 | + | 780 | WP_001077358.1 | sorbitol-6-phosphate dehydrogenase | - |
| LHV65_RS13925 (2834696) | 2834696..2835055 | + | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| LHV65_RS13930 (2835122) | 2835122..2835895 | + | 774 | WP_000804550.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| LHV65_RS13935 (2835888) | 2835888..2836853 | + | 966 | WP_001287420.1 | hypothetical protein | VF |
| LHV65_RS13940 (2836850) | 2836850..2838364 | - | 1515 | WP_000010749.1 | nitric oxide reductase transcriptional regulator NorR | - |
| LHV65_RS13945 (2838551) | 2838551..2839990 | + | 1440 | WP_000029634.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| LHV65_RS13950 (2839987) | 2839987..2841120 | + | 1134 | WP_000064752.1 | NADH:flavorubredoxin reductase NorW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|