MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP084894 Location: 3273930..3294861 Organism: Escherichia coli strain g83 Replicon: chromosome
Accession: NZ_CP084894 Location: 3273930..3294861 Organism: Escherichia coli strain g83 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LHV61_RS15960 (3269762) | 3269762..3271093 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| LHV61_RS15965 (3271115) | 3271115..3272104 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LHV61_RS15970 (3272203) | 3272203..3273141 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LHV61_RS15975 (3273456) | 3273456..3273674 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| LHV61_RS15980 (3273930) | 3273930..3274469 | + | 540 | WP_000675733.1 | protein YhaB | - |
| LHV61_RS15985 (3274491) | 3274491..3275678 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| LHV61_RS15995 (3276701) | 3276701..3277846 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| LHV61_RS16000 (3277943) | 3277943..3278833 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LHV61_RS16005 (3278863) | 3278863..3279633 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LHV61_RS16010 (3279649) | 3279649..3280983 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LHV61_RS16015 (3281358) | 3281358..3282929 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| LHV61_RS16020 (3283078) | 3283078..3283413 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LHV61_RS16025 (3283413) | 3283413..3283877 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LHV61_RS16030 (3283932) | 3283932..3284741 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| LHV61_RS16035 (3284990) | 3284990..3286270 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LHV61_RS16040 (3286293) | 3286293..3286766 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LHV61_RS16045 (3286777) | 3286777..3287148 | + | 372 | Protein_3134 | PTS sugar transporter subunit IIC | - |
| LHV61_RS16050 (3287144) | 3287144..3287701 | + | 558 | Protein_3135 | amidohydrolase family protein | - |
| LHV61_RS16055 (3288052) | 3288052..3289206 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| LHV61_RS16060 (3289219) | 3289219..3290079 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| LHV61_RS16065 (3290246) | 3290246..3290722 | + | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| LHV61_RS16070 (3290761) | 3290761..3291564 | + | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| LHV61_RS16075 (3291554) | 3291554..3292345 | + | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| LHV61_RS16080 (3292346) | 3292346..3293101 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| LHV61_RS16085 (3293502) | 3293502..3294086 | + | 585 | WP_001045432.1 | fimbrial protein | - |
| LHV61_RS16090 (3294166) | 3294166..3294861 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| LHV61_RS16095 (3294890) | 3294890..3297406 | + | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| LHV61_RS16100 (3297417) | 3297417..3298508 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| LHV61_RS16105 (3298551) | 3298551..3299411 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|