MGE detailed information
MGE type: Genomic_island MGE length: 28762 bp
Accession: NZ_CP084529 Location: 2795758..2824519 Organism: Escherichia coli strain Origami2-DE3 Replicon: chromosome
Accession: NZ_CP084529 Location: 2795758..2824519 Organism: Escherichia coli strain Origami2-DE3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFW28_RS13325 (2790796) | 2790796..2791632 | - | 837 | WP_000383237.1 | 5-dehydro-4-deoxy-D-glucuronate isomerase | - |
| LFW28_RS13330 (2791919) | 2791919..2793100 | - | 1182 | WP_000656030.1 | acetyl-CoA C-acetyltransferase | - |
| LFW28_RS13335 (2793355) | 2793355..2794584 | + | 1230 | WP_000065950.1 | amino acid permease | - |
| LFW28_RS13340 (2795044) | 2795044..2795676 | + | 633 | WP_001336169.1 | helix-turn-helix transcriptional regulator | - |
| LFW28_RS13345 (2796010) | 2796010..2796819 | + | 810 | WP_001300710.1 | transcriptional regulator | - |
| LFW28_RS13350 (2796812) | 2796812..2797294 | + | 483 | WP_000568339.1 | protein YqeJ | - |
| LFW28_RS13355 (2797327) | 2797327..2797407 | - | 81 | WP_000655820.1 | hypothetical protein | - |
| LFW28_RS13360 (2797443) | 2797443..2797868 | - | 426 | WP_000350612.1 | protein YqeK | - |
| LFW28_RS13365 (2798062) | 2798062..2798551 | + | 490 | Protein_2623 | hypothetical protein | - |
| LFW28_RS13370 (2798776) | 2798776..2799267 | + | 492 | WP_000102780.1 | Chaperone protein SicA | VF |
| LFW28_RS13375 (2799602) | 2799602..2800978 | + | 1377 | WP_000362702.1 | HilA family transcriptional regulator YgeH | - |
| LFW28_RS13380 (2801146) | 2801146..2801364 | + | 219 | WP_000184091.1 | protein YgeI | - |
| LFW28_RS13385 (2801549) | 2801549..2801923 | + | 375 | WP_001315817.1 | hypothetical protein | VF |
| LFW28_RS13390 (2801968) | 2801968..2802600 | - | 633 | Protein_2628 | Virulence factors putative positive transcription regulator BvgA | VF |
| LFW28_RS13395 (2802822) | 2802822..2803253 | - | 432 | WP_000606430.1 | hypothetical protein | - |
| LFW28_RS13400 (2803256) | 2803256..2803528 | - | 273 | WP_001350544.1 | hypothetical protein | - |
| LFW28_RS13405 (2803470) | 2803470..2803868 | - | 399 | Protein_2631 | type III secretion apparatus protein OrgA/MxiK | - |
| LFW28_RS13410 (2803922) | 2803922..2804122 | - | 201 | Protein_2632 | glutamate decarboxylase | - |
| LFW28_RS13415 (2804484) | 2804484..2807267 | - | 2784 | WP_001244968.1 | M16 family metallopeptidase | - |
| LFW28_RS13420 (2807324) | 2807324..2809696 | - | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
| LFW28_RS13425 (2809734) | 2809734..2811419 | - | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| LFW28_RS13430 (2811622) | 2811622..2811744 | + | 123 | WP_120795387.1 | protein YneP | - |
| LFW28_RS13435 (2811710) | 2811710..2812867 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| LFW28_RS13440 (2812919) | 2812919..2814601 | - | 1683 | WP_001295684.1 | sulfatase | - |
| LFW28_RS13445 (2815003) | 2815003..2815764 | - | 762 | WP_000060495.1 | acid stress response transcriptional regulator YdeO | - |
| LFW28_RS13450 (2815839) | 2815839..2816036 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| LFW28_RS13455 (2816284) | 2816284..2818563 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| LFW28_RS13460 (2818897) | 2818897..2819811 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| LFW28_RS13465 (2819870) | 2819870..2820373 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| LFW28_RS13470 (2820386) | 2820386..2820916 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| LFW28_RS13475 (2820930) | 2820930..2822156 | - | 1227 | Protein_2645 | Outer membrane usher protein FimD | VF |
| LFW28_RS13480 (2822411) | 2822411..2822619 | - | 209 | Protein_2646 | AraC family transcriptional regulator | - |
| LFW28_RS13485 (2822931) | 2822931..2824253 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| LFW28_RS13490 (2824253) | 2824253..2824519 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|