MGE detailed information
MGE type: Genomic_island MGE length: 20029 bp
Accession: NZ_CP084207 Location: 146604..166632 Organism: Escherichia coli strain EC2648-R1-1 Replicon: chromosome
Accession: NZ_CP084207 Location: 146604..166632 Organism: Escherichia coli strain EC2648-R1-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDB15_RS00665 (142083) | 142083..142586 | - | 504 | WP_072647342.1 | type 1 fimbria minor subunit FimG | - |
| LDB15_RS00670 (142599) | 142599..143129 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| LDB15_RS00675 (143139) | 143139..145775 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| LDB15_RS00680 (145842) | 145842..146567 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| LDB15_RS00685 (146604) | 146604..147143 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| LDB15_RS00690 (147208) | 147208..147756 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| LDB15_RS00695 (148238) | 148238..148792 | - | 555 | WP_000983104.1 | Tyrosine recombinase XerD | VF |
| LDB15_RS00705 (150088) | 150088..150690 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| LDB15_RS00710 (152146) | 152146..152862 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LDB15_RS00715 (152882) | 152882..153988 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| LDB15_RS00720 (154053) | 154053..155033 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| LDB15_RS00725 (155143) | 155143..155348 | + | 206 | Protein_142 | HNH endonuclease | - |
| LDB15_RS00730 (155616) | 155616..156856 | - | 1241 | Protein_143 | helicase YjhR | - |
| LDB15_RS00735 (156972) | 156972..157103 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| LDB15_RS00740 (157594) | 157594..157851 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| LDB15_RS00745 (157863) | 157863..158408 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| LDB15_RS00750 (158464) | 158464..159210 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| LDB15_RS00755 (159379) | 159379..159597 | + | 219 | Protein_148 | hypothetical protein | - |
| LDB15_RS00760 (159635) | 159635..159751 | + | 117 | Protein_149 | VOC family protein | - |
| LDB15_RS00765 (159996) | 159996..161117 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| LDB15_RS00770 (161114) | 161114..161392 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| LDB15_RS00775 (161404) | 161404..162717 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| LDB15_RS00780 (162730) | 162730..163536 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| LDB15_RS00785 (163667) | 163667..164098 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| LDB15_RS00790 (164110) | 164110..164742 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| LDB15_RS00795 (164759) | 164759..165541 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LDB15_RS00800 (165844) | 165844..166632 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| LDB15_RS00805 (166637) | 166637..167542 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| LDB15_RS00810 (167553) | 167553..169520 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| LDB15_RS00815 (169627) | 169627..170976 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|