MGE detailed information
MGE type: Genomic_island MGE length: 22659 bp
Accession: NZ_CP084026 Location: 451955..474613 Organism: Escherichia coli strain 035053C1pKPC2_Vir_090515B1 Replicon: chromosome
Accession: NZ_CP084026 Location: 451955..474613 Organism: Escherichia coli strain 035053C1pKPC2_Vir_090515B1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LC440_RS02250 (447405) | 447405..448265 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| LC440_RS02255 (448308) | 448308..449399 | - | 1092 | WP_000816992.1 | fimbrial protein | - |
| LC440_RS02260 (449410) | 449410..451926 | - | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| LC440_RS02265 (451955) | 451955..452650 | - | 696 | WP_000044775.1 | hypothetical protein | VF |
| LC440_RS02270 (452730) | 452730..453314 | - | 585 | WP_001045432.1 | fimbrial protein | - |
| LC440_RS02275 (453715) | 453715..454470 | - | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| LC440_RS02280 (454471) | 454471..455262 | - | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| LC440_RS02285 (455252) | 455252..456055 | - | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| LC440_RS02290 (456094) | 456094..456570 | - | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| LC440_RS02295 (456737) | 456737..457597 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| LC440_RS02300 (457610) | 457610..458764 | - | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| LC440_RS02305 (459115) | 459115..459672 | - | 558 | Protein_450 | amidohydrolase family protein | - |
| LC440_RS02310 (459668) | 459668..460039 | - | 372 | Protein_451 | PTS sugar transporter subunit IIC | - |
| LC440_RS02315 (460050) | 460050..460523 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LC440_RS02320 (460546) | 460546..461826 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LC440_RS02325 (462075) | 462075..462884 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| LC440_RS02330 (462939) | 462939..463403 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LC440_RS02335 (463403) | 463403..463738 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LC440_RS02340 (463887) | 463887..465458 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| LC440_RS02345 (465833) | 465833..467167 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LC440_RS02350 (467183) | 467183..467953 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LC440_RS02355 (467983) | 467983..468873 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LC440_RS02360 (468970) | 468970..470115 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| LC440_RS02370 (471138) | 471138..472325 | - | 1188 | WP_000484600.1 | YhaC family protein | - |
| LC440_RS02375 (472347) | 472347..472886 | - | 540 | WP_000675733.1 | protein YhaB | - |
| LC440_RS02380 (473142) | 473142..473360 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| LC440_RS02385 (473675) | 473675..474613 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LC440_RS02390 (474712) | 474712..475701 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LC440_RS02395 (475723) | 475723..477054 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| LC440_RS02400 (477080) | 477080..478288 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|