MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 130391 bp
Accession: NZ_CP083829 Location: 1..130391 Organism: Enterobacter kobei strain 11778-yvys Replicon: plasmid p11778_1
Accession: NZ_CP083829 Location: 1..130391 Organism: Enterobacter kobei strain 11778-yvys Replicon: plasmid p11778_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCD42_RS22070 (1) | 1..1014 | + | 1014 | WP_208557578.1 | plasmid replication initiator RepA | - |
| LCD42_RS22075 (1862) | 1862..2092 | + | 231 | WP_208557579.1 | DUF2767 family protein | - |
| LCD42_RS22080 (2113) | 2113..2880 | - | 768 | WP_244249133.1 | TraX family protein | - |
| LCD42_RS22085 (3331) | 3331..3633 | - | 303 | WP_045332749.1 | hypothetical protein | - |
| LCD42_RS22090 (4031) | 4031..4477 | + | 447 | WP_208557625.1 | PAP fimbrial minor pilin protein | VF |
| LCD42_RS22095 (4529) | 4529..6623 | + | 2095 | Protein_5 | Outer membrane usher protein PapC | VF |
| LCD42_RS22100 (7090) | 7090..7284 | + | 195 | WP_208557580.1 | hypothetical protein | - |
| LCD42_RS22105 (7328) | 7328..7558 | - | 231 | WP_208557581.1 | hypothetical protein | - |
| LCD42_RS22110 (7572) | 7572..7774 | - | 203 | Protein_8 | hemolysin expression modulator Hha | - |
| LCD42_RS22115 (7881) | 7881..8363 | - | 483 | WP_208557582.1 | DNA-binding protein | - |
| LCD42_RS22120 (8397) | 8397..8972 | - | 576 | WP_208557583.1 | hypothetical protein | - |
| LCD42_RS22125 (8972) | 8972..9229 | - | 258 | WP_208557584.1 | hypothetical protein | - |
| LCD42_RS22130 (9604) | 9604..9789 | - | 186 | WP_208557585.1 | hypothetical protein | - |
| LCD42_RS22135 (10926) | 10926..12074 | - | 1149 | WP_208557587.1 | fimbrial protein | - |
| LCD42_RS22140 (12140) | 12140..14581 | - | 2442 | WP_244249134.1 | Outer membrane usher protein HtrE | VF |
| LCD42_RS22145 (14788) | 14788..15489 | - | 702 | WP_208557589.1 | putative fimbrial chaperone YadV | VF |
| LCD42_RS22150 (15551) | 15551..16096 | - | 546 | WP_208557590.1 | Type-1 fimbrial protein, A chain | VF |
| LCD42_RS22155 (16200) | 16200..16580 | - | 381 | WP_208557591.1 | winged helix-turn-helix domain-containing protein | - |
| LCD42_RS22160 (17240) | 17240..18088 | + | 849 | WP_208557592.1 | winged helix-turn-helix domain-containing protein | - |
| LCD42_RS22165 (18781) | 18781..20304 | - | 1524 | WP_208557593.1 | cyclic diguanylate phosphodiesterase | - |
| LCD42_RS22170 (20551) | 20551..21525 | + | 975 | WP_208557594.1 | sensor domain-containing diguanylate cyclase | - |
| LCD42_RS22175 (21789) | 21789..22589 | + | 801 | WP_247171302.1 | DUF4145 domain-containing protein | - |
| LCD42_RS22180 (22828) | 22828..23487 | - | 660 | WP_208557595.1 | HD domain-containing protein | - |
| LCD42_RS22185 (23580) | 23580..24017 | - | 438 | WP_208557596.1 | cupin domain-containing protein | - |
| LCD42_RS22190 (24044) | 24044..24496 | - | 453 | WP_100122914.1 | carboxymuconolactone decarboxylase family protein | - |
| LCD42_RS22195 (24608) | 24608..26020 | + | 1413 | WP_208557597.1 | PLP-dependent aminotransferase family protein | - |
| LCD42_RS22200 (26454) | 26454..27176 | + | 723 | WP_208557598.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| LCD42_RS22205 (27241) | 27241..27837 | - | 597 | WP_208557599.1 | TetR/AcrR family transcriptional regulator | - |
| LCD42_RS22210 (28019) | 28019..28660 | + | 642 | WP_208557600.1 | HD domain-containing protein | - |
| LCD42_RS22215 (28755) | 28755..29669 | + | 915 | WP_208557601.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| LCD42_RS22220 (29687) | 29687..30018 | - | 332 | Protein_30 | GAF domain-containing protein | - |
| LCD42_RS22225 (30226) | 30226..31188 | + | 963 | WP_208557602.1 | DJ-1/PfpI family protein | - |
| LCD42_RS22230 (31784) | 31784..33463 | + | 1680 | WP_208557603.1 | DNA repair protein | - |
| LCD42_RS22235 (33648) | 33648..34064 | - | 417 | WP_208557604.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LCD42_RS22240 (34061) | 34061..34291 | - | 231 | WP_021312767.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LCD42_RS22245 (34931) | 34931..35287 | + | 357 | WP_095450889.1 | hypothetical protein | - |
| LCD42_RS22250 (35403) | 35403..35963 | + | 561 | WP_095450890.1 | hypothetical protein | - |
| LCD42_RS22850 (36006) | 36006..36140 | + | 135 | WP_255248831.1 | hypothetical protein | - |
| LCD42_RS22255 (36142) | 36142..36918 | + | 777 | WP_208557605.1 | site-specific integrase | - |
| LCD42_RS22260 (37094) | 37094..37365 | + | 272 | Protein_39 | tyrosine-type recombinase/integrase | - |
| LCD42_RS22265 (37609) | 37609..38619 | - | 1011 | WP_063161595.1 | RepB family plasmid replication initiator protein | - |
| LCD42_RS22270 (39359) | 39359..40525 | + | 1167 | WP_045325857.1 | plasmid-partitioning protein SopA | - |
| LCD42_RS22275 (40525) | 40525..41499 | + | 975 | WP_208557606.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LCD42_RS22280 (42231) | 42231..43502 | - | 1272 | WP_208557607.1 | Y-family DNA polymerase | - |
| LCD42_RS22285 (43502) | 43502..43933 | - | 432 | WP_208557608.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LCD42_RS22290 (44165) | 44165..45136 | + | 972 | WP_208557623.1 | plasmid segregation protein ParM | - |
| LCD42_RS22295 (45139) | 45139..45801 | + | 663 | WP_208557609.1 | plasmid partitioning/stability family protein | - |
| LCD42_RS22300 (45805) | 45805..46068 | + | 264 | WP_208557610.1 | hypothetical protein | - |
| LCD42_RS22305 (46097) | 46097..46297 | + | 201 | WP_208557611.1 | hypothetical protein | - |
| LCD42_RS22310 (46388) | 46388..46735 | + | 348 | WP_208557612.1 | hypothetical protein | - |
| LCD42_RS22315 (47258) | 47258..47949 | + | 692 | Protein_50 | DNA methylase | - |
| LCD42_RS22320 (47946) | 47946..48167 | + | 222 | WP_095450899.1 | hypothetical protein | - |
| LCD42_RS22325 (48223) | 48223..48645 | + | 423 | WP_208557613.1 | DUF1380 family protein | - |
| LCD42_RS22330 (49002) | 49002..49430 | + | 429 | WP_208557614.1 | antirestriction protein | - |
| LCD42_RS22335 (49469) | 49469..49666 | + | 198 | WP_023337955.1 | hypothetical protein | - |
| LCD42_RS22340 (49800) | 49800..49964 | + | 165 | WP_208557615.1 | hypothetical protein | - |
| LCD42_RS22345 (50452) | 50452..50724 | + | 273 | WP_208557616.1 | hypothetical protein | - |
| LCD42_RS22350 (50768) | 50768..51133 | + | 366 | WP_208557617.1 | hypothetical protein | - |
| LCD42_RS22355 (51201) | 51201..53213 | + | 2013 | WP_208557618.1 | ParB/RepB/Spo0J family partition protein | - |
| LCD42_RS22360 (53251) | 53251..53673 | + | 423 | WP_208557619.1 | conjugation system SOS inhibitor PsiB | - |
| LCD42_RS22365 (53670) | 53670..54401 | + | 732 | WP_208557620.1 | plasmid SOS inhibition protein A | - |
| LCD42_RS22370 (54398) | 54398..54628 | + | 231 | WP_032641239.1 | hypothetical protein | - |
| LCD42_RS22375 (54625) | 54625..54849 | + | 225 | WP_244249135.1 | hypothetical protein | - |
| - (54931) | 54931..55054 | + | 124 | NuclAT_0 | - | - |
| - (54931) | 54931..55054 | + | 124 | NuclAT_0 | - | - |
| - (54931) | 54931..55054 | + | 124 | NuclAT_0 | - | - |
| - (54931) | 54931..55054 | + | 124 | NuclAT_0 | - | - |
| LCD42_RS22380 (55041) | 55041..55193 | + | 153 | Protein_63 | DUF5431 family protein | - |
| LCD42_RS22385 (55138) | 55138..55260 | + | 123 | WP_276522999.1 | Hok/Gef family protein | - |
| LCD42_RS22390 (56123) | 56123..56437 | + | 315 | WP_095450946.1 | hypothetical protein | - |
| LCD42_RS22395 (56547) | 56547..56705 | + | 159 | WP_244249142.1 | hypothetical protein | - |
| LCD42_RS22400 (56783) | 56783..57244 | + | 462 | WP_095450942.1 | DUF1419 domain-containing protein | - |
| LCD42_RS22405 (57332) | 57332..57532 | + | 201 | WP_013087182.1 | hypothetical protein | - |
| LCD42_RS22855 (57573) | 57573..57701 | + | 129 | WP_276522998.1 | hypothetical protein | - |
| LCD42_RS22410 (57714) | 57714..58364 | + | 651 | WP_244249139.1 | N-6 DNA methylase | - |
| LCD42_RS22415 (58406) | 58406..58741 | + | 336 | WP_208557629.1 | hypothetical protein | - |
| LCD42_RS22420 (59432) | 59432..59725 | + | 294 | WP_061549467.1 | hypothetical protein | - |
| LCD42_RS22425 (59742) | 59742..60563 | + | 822 | WP_183274244.1 | DUF932 domain-containing protein | - |
| LCD42_RS22430 (60592) | 60592..61131 | - | 540 | WP_244249140.1 | hypothetical protein | VF |
| LCD42_RS22435 (61705) | 61705..62100 | + | 396 | WP_029403780.1 | conjugal transfer protein | - |
| LCD42_RS22440 (62133) | 62133..62774 | - | 642 | WP_208557630.1 | Arc family DNA-binding protein | - |
| LCD42_RS22445 (62971) | 62971..63324 | + | 354 | WP_032645467.1 | type IV conjugative transfer system pilin TraA | - |
| LCD42_RS22450 (63328) | 63328..63630 | + | 303 | WP_208557651.1 | type IV conjugative transfer system protein TraL | - |
| LCD42_RS22455 (63637) | 63637..64218 | + | 582 | WP_208557631.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| LCD42_RS22460 (64230) | 64230..64970 | + | 741 | WP_023338038.1 | type-F conjugative transfer system secretin TraK | - |
| LCD42_RS22465 (64973) | 64973..66376 | + | 1404 | WP_208557652.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LCD42_RS22470 (66384) | 66384..66632 | + | 249 | WP_208557632.1 | hypothetical protein | - |
| LCD42_RS22475 (66629) | 66629..67051 | + | 423 | WP_208557633.1 | hypothetical protein | - |
| LCD42_RS22480 (67044) | 67044..67511 | + | 468 | WP_208557634.1 | hypothetical protein | - |
| LCD42_RS22485 (67675) | 67675..68070 | + | 396 | WP_208557635.1 | hypothetical protein | - |
| LCD42_RS22490 (68129) | 68129..68683 | + | 555 | WP_208557636.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LCD42_RS22495 (68680) | 68680..68934 | + | 255 | WP_208557637.1 | hypothetical protein | - |
| LCD42_RS22500 (68931) | 68931..71540 | + | 2610 | WP_208557638.1 | type IV secretion system protein TraC | - |
| LCD42_RS22505 (71537) | 71537..71950 | + | 414 | WP_208557639.1 | type-F conjugative transfer system protein TrbI | - |
| LCD42_RS22510 (71947) | 71947..72582 | + | 636 | WP_032641283.1 | type-F conjugative transfer system protein TraW | - |
| LCD42_RS22515 (72579) | 72579..72971 | + | 393 | WP_208557640.1 | hypothetical protein | - |
| LCD42_RS22520 (72962) | 72962..73240 | + | 279 | WP_208557641.1 | hypothetical protein | - |
| LCD42_RS22525 (73231) | 73231..74241 | + | 1011 | WP_208557642.1 | hypothetical protein | - |
| LCD42_RS22530 (74345) | 74345..74560 | + | 216 | WP_032641288.1 | hypothetical protein | - |
| LCD42_RS22535 (74616) | 74616..74939 | + | 324 | WP_032641290.1 | hypothetical protein | - |
| LCD42_RS22540 (74936) | 74936..75934 | + | 999 | WP_032641291.1 | conjugal transfer pilus assembly protein TraU | - |
| LCD42_RS22545 (75945) | 75945..76568 | + | 624 | WP_208557643.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LCD42_RS22550 (76565) | 76565..78424 | + | 1860 | WP_110915518.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LCD42_RS22555 (78421) | 78421..79203 | + | 783 | WP_110915517.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LCD42_RS22560 (79323) | 79323..79541 | + | 219 | WP_110915516.1 | hypothetical protein | - |
| LCD42_RS22565 (79531) | 79531..80142 | + | 612 | WP_208557644.1 | F-type conjugal transfer protein TrbB | - |
| LCD42_RS22570 (80160) | 80160..80423 | + | 264 | WP_208557645.1 | hypothetical protein | - |
| LCD42_RS22575 (80420) | 80420..80836 | + | 417 | WP_110915513.1 | hypothetical protein | - |
| LCD42_RS22580 (80829) | 80829..82193 | + | 1365 | WP_208557646.1 | conjugal transfer pilus assembly protein TraH | - |
| LCD42_RS22585 (82193) | 82193..85483 | + | 3291 | WP_208557647.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LCD42_RS22590 (85485) | 85485..86174 | + | 690 | WP_208557648.1 | hypothetical protein | - |
| LCD42_RS22595 (86324) | 86324..87016 | + | 693 | WP_208557649.1 | complement resistance protein TraT | - |
| LCD42_RS22600 (87013) | 87013..87468 | - | 456 | WP_001166628.1 | IS607 family transposase ISChh1 | Transposase |
| LCD42_RS22605 (87540) | 87540..87905 | + | 366 | WP_001294656.1 | mercuric ion transporter MerT | - |
| LCD42_RS22610 (87921) | 87921..88196 | + | 276 | WP_000732275.1 | mercury resistance system periplasmic binding protein MerP | - |
| LCD42_RS22615 (88224) | 88224..88649 | + | 426 | WP_000522996.1 | organomercurial transporter MerC | - |
| LCD42_RS22620 (88688) | 88688..90373 | + | 1686 | WP_000209296.1 | mercury(II) reductase | - |
| LCD42_RS22625 (90391) | 90391..90756 | + | 366 | WP_001277466.1 | mercury resistance co-regulator MerD | - |
| LCD42_RS22630 (90753) | 90753..90989 | + | 237 | WP_001087807.1 | broad-spectrum mercury transporter MerE | - |
| LCD42_RS22635 (91055) | 91055..91267 | + | 213 | WP_000993245.1 | DUF3330 domain-containing protein | - |
| LCD42_RS22640 (91300) | 91300..91365 | + | 66 | Protein_116 | EAL domain-containing protein | - |
| LCD42_RS22645 (91505) | 91505..91771 | - | 267 | Protein_117 | IS6 family transposase IS6100 | Transposase |
| LCD42_RS22650 (91826) | 91826..92590 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| LCD42_RS22655 (92708) | 92708..92776 | - | 69 | Protein_119 | EAL domain-containing protein | - |
| LCD42_RS22660 (93097) | 93097..93597 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| LCD42_RS22665 (93725) | 93725..94288 | - | 564 | Protein_121 | dihydropteroate synthase | - |
| LCD42_RS22670 (94253) | 94253..94963 | + | 711 | WP_023082842.1 | DUF6118 family protein | - |
| LCD42_RS22675 (94983) | 94983..95549 | - | 567 | WP_003830785.1 | TetR/AcrR family transcriptional regulator | - |
| LCD42_RS22680 (95560) | 95560..97071 | - | 1512 | WP_003830786.1 | MFS transporter | - |
| LCD42_RS22685 (97391) | 97391..97879 | - | 489 | WP_031668850.1 | hypothetical protein | - |
| LCD42_RS22690 (98033) | 98033..98497 | - | 465 | Protein_126 | IS6 family transposase IS6100 | Transposase |
| LCD42_RS22695 (98549) | 98549..99253 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCD42_RS22700 (99319) | 99319..99540 | + | 222 | Protein_128 | IS6 family transposase IS15 | Transposase |
| LCD42_RS22705 (99846) | 99846..100403 | + | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| LCD42_RS22710 (100406) | 100406..103378 | + | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| LCD42_RS22715 (103406) | 103406..103492 | + | 87 | Protein_131 | complement resistance protein TraT | - |
| LCD42_RS22720 (103683) | 103683..103994 | + | 312 | WP_208557558.1 | hypothetical protein | - |
| LCD42_RS22725 (104110) | 104110..106677 | + | 2568 | WP_208557559.1 | type IV conjugative transfer system coupling protein TraD | - |
| LCD42_RS22730 (106674) | 106674..112097 | + | 5424 | WP_208557560.1 | Multifunctional conjugation protein TraI | Relaxase |
| LCD42_RS22735 (112126) | 112126..112908 | + | 783 | WP_208557561.1 | DsbA family protein | - |
| LCD42_RS22740 (113045) | 113045..113272 | + | 228 | WP_208557562.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LCD42_RS22745 (113299) | 113299..113634 | + | 336 | WP_208557563.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LCD42_RS22750 (113801) | 113801..114142 | - | 342 | WP_208557564.1 | hypothetical protein | - |
| LCD42_RS22860 (114863) | 114863..114985 | - | 123 | WP_276522996.1 | hypothetical protein | - |
| LCD42_RS22755 (115045) | 115045..115812 | - | 768 | WP_208557565.1 | hypothetical protein | - |
| LCD42_RS22760 (116657) | 116657..118276 | - | 1620 | WP_208557566.1 | Phosphoethanolamine transferase EptA | VF |
| LCD42_RS22765 (118645) | 118645..119640 | - | 996 | WP_208557567.1 | tyrosine-type recombinase/integrase | - |
| LCD42_RS22770 (119890) | 119890..121038 | + | 1149 | WP_208557568.1 | hypothetical protein | - |
| LCD42_RS22775 (121138) | 121138..121638 | - | 501 | WP_208557569.1 | DUF4411 family protein | - |
| LCD42_RS22780 (121635) | 121635..122777 | - | 1143 | WP_208557570.1 | XRE family transcriptional regulator | - |
| LCD42_RS22785 (123286) | 123286..123990 | - | 705 | WP_208557571.1 | toll/interleukin-1 receptor domain-containing protein | - |
| LCD42_RS22790 (124156) | 124156..124311 | - | 156 | Protein_147 | ISNCY family transposase ISLad2 | Transposase |
| LCD42_RS22795 (124535) | 124535..125533 | + | 999 | WP_208557572.1 | nucleotidyltransferase | - |
| LCD42_RS22800 (125537) | 125537..126454 | + | 918 | WP_208557573.1 | S-4TM family putative pore-forming effector | - |
| LCD42_RS22805 (126546) | 126546..127025 | - | 480 | WP_208557574.1 | hypothetical protein | - |
| LCD42_RS22810 (127025) | 127025..127300 | - | 276 | WP_208557575.1 | hypothetical protein | - |
| LCD42_RS22815 (127400) | 127400..128797 | - | 1398 | WP_208557576.1 | ISNCY family transposase ISKpn21 | Transposase |
| LCD42_RS22820 (128997) | 128997..129482 | - | 486 | WP_208557577.1 | GNAT family N-acetyltransferase | - |
| LCD42_RS22825 (129470) | 129470..129736 | - | 267 | WP_032664831.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|