MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP083481 Location: 2539794..2556338 Organism: Escherichia coli strain elppa9 Replicon: chromosome
Accession: NZ_CP083481 Location: 2539794..2556338 Organism: Escherichia coli strain elppa9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U12_RS12410 (2536325) | 2536325..2537050 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| K9U12_RS12415 (2537087) | 2537087..2537626 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| K9U12_RS12420 (2537691) | 2537691..2538239 | - | 549 | WP_000695557.1 | type 1 fimbrial major subunit FimA | - |
| K9U12_RS12425 (2538720) | 2538720..2539316 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| K9U12_RS12430 (2539794) | 2539794..2540396 | - | 603 | WP_000790583.1 | type 1 fimbria switch DNA invertase FimB | - |
| K9U12_RS12435 (2541852) | 2541852..2542568 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| K9U12_RS12440 (2542588) | 2542588..2543694 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| K9U12_RS12445 (2543759) | 2543759..2544739 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| K9U12_RS12450 (2544849) | 2544849..2545054 | + | 206 | Protein_2436 | HNH endonuclease | - |
| K9U12_RS12455 (2545322) | 2545322..2546562 | - | 1241 | Protein_2437 | helicase YjhR | - |
| K9U12_RS12460 (2546678) | 2546678..2546809 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| K9U12_RS12465 (2547300) | 2547300..2547557 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| K9U12_RS12470 (2547569) | 2547569..2548114 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| K9U12_RS12475 (2548170) | 2548170..2548916 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| K9U12_RS12480 (2549085) | 2549085..2549303 | + | 219 | Protein_2442 | hypothetical protein | - |
| K9U12_RS12485 (2549341) | 2549341..2549457 | + | 117 | Protein_2443 | VOC family protein | - |
| K9U12_RS12490 (2549702) | 2549702..2550823 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| K9U12_RS12495 (2550820) | 2550820..2551098 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| K9U12_RS12500 (2551110) | 2551110..2552423 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| K9U12_RS12505 (2552436) | 2552436..2553242 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| K9U12_RS12510 (2553373) | 2553373..2553804 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| K9U12_RS12515 (2553816) | 2553816..2554448 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| K9U12_RS12520 (2554465) | 2554465..2555247 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| K9U12_RS12525 (2555550) | 2555550..2556338 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| K9U12_RS12530 (2556343) | 2556343..2557248 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| K9U12_RS12535 (2557259) | 2557259..2559226 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| K9U12_RS12540 (2559333) | 2559333..2560682 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|