MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 84583 bp
Accession: NZ_CP082948 Location: 658578..743160 Organism: Streptococcus suis strain SZ1908 Replicon: chromosome
Accession: NZ_CP082948 Location: 658578..743160 Organism: Streptococcus suis strain SZ1908 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8227_RS03260 (K8227_03260) | 653689..654072 | + | 384 | WP_014636276.1 | hypothetical protein | - |
| K8227_RS03265 (K8227_03265) | 654081..654314 | + | 234 | WP_014636277.1 | hypothetical protein | - |
| K8227_RS03270 (K8227_03270) | 654317..654901 | + | 585 | WP_014636278.1 | CPBP family intramembrane metalloprotease | - |
| K8227_RS03275 (K8227_03275) | 654978..655466 | + | 489 | WP_041179161.1 | hypothetical protein | - |
| K8227_RS03280 (K8227_03280) | 655466..657283 | + | 1818 | WP_014636280.1 | type IV secretory system conjugative DNA transfer family protein | - |
| K8227_RS03285 (K8227_03285) | 657301..657543 | + | 243 | WP_001072182.1 | hypothetical protein | - |
| K8227_RS03290 (K8227_03290) | 657562..658416 | + | 855 | WP_014636281.1 | conjugal transfer protein TrbL | - |
| K8227_RS03295 (K8227_03295) | 658478..658831 | + | 354 | WP_014636282.1 | PrgI family protein | - |
| K8227_RS03300 (K8227_03300) | 658788..661139 | + | 2352 | WP_014636283.1 | ATPase AAA | - |
| K8227_RS03305 (K8227_03305) | 661141..663942 | + | 2802 | WP_015445150.1 | phage tail tip lysozyme | - |
| K8227_RS03310 (K8227_03310) | 664079..665089 | + | 1011 | WP_002936451.1 | Abi family protein | - |
| K8227_RS03315 (K8227_03315) | 665203..665487 | + | 285 | Protein_609 | CHAP domain-containing protein | - |
| K8227_RS03320 (K8227_03320) | 665573..665971 | - | 399 | Protein_610 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| K8227_RS03325 (K8227_03325) | 666081..667202 | + | 1122 | WP_015445098.1 | IS110 family transposase ISCARN28 | Transposase |
| K8227_RS03330 (K8227_03330) | 667579..668025 | - | 447 | Protein_612 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| K8227_RS03335 (K8227_03335) | 668022..668612 | - | 591 | WP_000037237.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| K8227_RS03340 (K8227_03340) | 668782..673677 | + | 4896 | WP_014636287.1 | Agglutinin receptor | VF |
| K8227_RS03345 (K8227_03345) | 673678..673869 | + | 192 | WP_014636288.1 | calcium-binding protein | - |
| K8227_RS03350 (K8227_03350) | 673853..674404 | + | 552 | WP_014636289.1 | hypothetical protein | - |
| K8227_RS03355 (K8227_03355) | 674453..680401 | + | 5949 | WP_014636290.1 | SNF2-related protein | - |
| K8227_RS03360 (K8227_03360) | 680382..680757 | + | 376 | Protein_618 | TnpV protein | - |
| K8227_RS03365 (K8227_03365) | 681124..683043 | + | 1920 | WP_014636291.1 | Tetracycline resistance protein TetO | VF |
| K8227_RS03370 (K8227_03370) | 683094..684314 | + | 1221 | WP_009247026.1 | hypothetical protein | ARG |
| K8227_RS03375 (K8227_03375) | 684913..685422 | + | 510 | WP_041179152.1 | hypothetical protein | VF |
| K8227_RS03380 (K8227_03380) | 685517..685942 | + | 426 | WP_000323896.1 | sigma-70 family RNA polymerase sigma factor | - |
| K8227_RS03385 (K8227_03385) | 686026..686499 | + | 474 | WP_000323521.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| K8227_RS03390 (K8227_03390) | 686653..687684 | + | 1032 | WP_001170965.1 | AAA family ATPase | - |
| K8227_RS03395 (K8227_03395) | 687930..688196 | + | 267 | WP_162495498.1 | hypothetical protein | - |
| K8227_RS03400 (K8227_03400) | 688203..689168 | + | 966 | WP_001145977.1 | MobV family relaxase | - |
| K8227_RS03405 (K8227_03405) | 689176..690030 | + | 855 | WP_000743701.1 | ParB/RepB/Spo0J family partition protein | - |
| K8227_RS03410 (K8227_03410) | 690107..690337 | + | 231 | WP_000659121.1 | PC4/YdbC family ssDNA-binding protein | - |
| K8227_RS03415 (K8227_03415) | 690408..690599 | + | 192 | WP_000503424.1 | hypothetical protein | - |
| K8227_RS03420 (K8227_03420) | 690653..692425 | + | 1773 | WP_014636293.1 | IS607 family transposase ISTsi1 | Transposase |
| K8227_RS03425 (K8227_03425) | 692392..693351 | + | 960 | Protein_631 | hypothetical protein | - |
| K8227_RS03430 (K8227_03430) | 693422..693721 | + | 300 | WP_014636295.1 | DUF5962 family protein | - |
| K8227_RS03435 (K8227_03435) | 693735..694025 | + | 291 | WP_000893083.1 | DUF5966 family protein | - |
| K8227_RS03440 (K8227_03440) | 694120..694758 | + | 639 | WP_014636296.1 | hypothetical protein | - |
| K8227_RS03445 (K8227_03445) | 694798..695898 | + | 1101 | WP_014636297.1 | toprim domain-containing protein | - |
| K8227_RS03450 (K8227_03450) | 695926..696153 | + | 228 | WP_000110922.1 | DUF5965 family protein | - |
| K8227_RS03455 (K8227_03455) | 696150..696539 | + | 390 | WP_014636298.1 | DUF5945 family protein | - |
| K8227_RS03460 (K8227_03460) | 696589..696879 | + | 291 | WP_000667951.1 | hypothetical protein | - |
| K8227_RS03465 (K8227_03465) | 696949..697425 | + | 477 | WP_000578719.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| K8227_RS03470 (K8227_03470) | 697425..698192 | + | 768 | WP_001235242.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| K8227_RS03475 (K8227_03475) | 698193..700736 | + | 2544 | WP_000601012.1 | AAA family ATPase | - |
| K8227_RS03480 (K8227_03480) | 701074..701436 | + | 363 | WP_000140674.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| K8227_RS03485 (K8227_03485) | 701439..701804 | + | 366 | WP_000431640.1 | MobC family plasmid mobilization relaxosome protein | - |
| K8227_RS03490 (K8227_03490) | 701791..703674 | + | 1884 | WP_014636299.1 | SAG1250 family conjugative relaxase | - |
| K8227_RS03495 (K8227_03500) | 703771..705144 | + | 1374 | Protein_645 | S8 family serine peptidase | - |
| K8227_RS03500 (K8227_03505) | 705185..705883 | + | 699 | WP_000276750.1 | Sensory transduction protein regX3 | VF |
| K8227_RS03505 (K8227_03510) | 705861..707204 | + | 1344 | WP_000977993.1 | HAMP domain-containing sensor histidine kinase | - |
| K8227_RS03510 (K8227_03515) | 707394..708095 | + | 702 | WP_000452012.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| K8227_RS03515 (K8227_03520) | 708088..708825 | + | 738 | WP_000181737.1 | lantibiotic ABC transporter permease | - |
| K8227_RS03520 (K8227_03525) | 708803..709489 | + | 687 | WP_001033677.1 | hypothetical protein | - |
| K8227_RS03525 (K8227_03530) | 709837..710004 | + | 168 | WP_001058290.1 | gallidermin/nisin family lantibiotic | - |
| K8227_RS03530 (K8227_03535) | 710245..713220 | + | 2976 | WP_014636302.1 | lantibiotic dehydratase | - |
| K8227_RS03535 (K8227_03540) | 713213..715009 | + | 1797 | WP_031912841.1 | ABC transporter ATP-binding protein | - |
| K8227_RS03540 (K8227_03545) | 715002..716279 | + | 1278 | WP_000344171.1 | lanthionine synthetase C family protein | - |
| K8227_RS03545 (K8227_03550) | 716281..716997 | + | 717 | WP_001226539.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| K8227_RS03550 (K8227_03555) | 717265..717669 | + | 405 | WP_000878635.1 | sigma-70 family RNA polymerase sigma factor | - |
| K8227_RS03555 (K8227_03560) | 718174..720105 | + | 1932 | WP_223375665.1 | hypothetical protein ; Integrase | Integrase |
| K8227_RS03565 (K8227_03570) | 720519..721631 | + | 1113 | WP_223375666.1 | UDP-galactopyranose mutase | VF |
| K8227_RS03570 (K8227_03575) | 721731..722276 | - | 546 | WP_012775026.1 | NADPH-dependent FMN reductase | - |
| K8227_RS03575 (K8227_03580) | 722339..722788 | - | 450 | WP_009909619.1 | MarR family transcriptional regulator | - |
| K8227_RS03580 (K8227_03585) | 723082..723929 | + | 848 | WP_087892711.1 | IS630 family transposase | - |
| K8227_RS03585 (K8227_03590) | 723988..724485 | + | 498 | WP_011922751.1 | DUF5590 domain-containing protein | - |
| K8227_RS03590 (K8227_03595) | 724482..725663 | + | 1182 | WP_011922154.1 | pyridoxal phosphate-dependent aminotransferase | - |
| K8227_RS03595 (K8227_03600) | 725678..727024 | + | 1347 | WP_011922752.1 | asparagine--tRNA ligase | - |
| K8227_RS03600 (K8227_03605) | 727296..727523 | + | 228 | WP_002938604.1 | DUF6290 family protein | - |
| K8227_RS03605 (K8227_03610) | 727513..727782 | + | 270 | Protein_666 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| K8227_RS03610 (K8227_03615) | 728188..729507 | + | 1320 | WP_012775027.1 | MATE family efflux transporter | - |
| K8227_RS03615 (K8227_03620) | 729558..729935 | + | 378 | WP_002937263.1 | RidA family protein | - |
| K8227_RS03620 (K8227_03625) | 729957..730844 | + | 888 | WP_011922160.1 | RNase adapter RapZ | - |
| K8227_RS03625 (K8227_03630) | 730841..731815 | + | 975 | WP_002937257.1 | YvcK family protein | - |
| K8227_RS03630 (K8227_03635) | 731812..732729 | + | 918 | WP_002937252.1 | DNA-binding protein WhiA | - |
| K8227_RS03635 (K8227_03640) | 733015..733710 | + | 696 | WP_012775028.1 | Crp/Fnr family transcriptional regulator | - |
| K8227_RS03640 (K8227_03645) | 733968..735200 | + | 1233 | WP_024379073.1 | arginine deiminase | - |
| K8227_RS03645 (K8227_03650) | 735200..735640 | + | 441 | WP_011922163.1 | GNAT family N-acetyltransferase | - |
| K8227_RS03650 (K8227_03655) | 735659..736672 | + | 1014 | WP_011922164.1 | ornithine carbamoyltransferase | - |
| K8227_RS03655 (K8227_03660) | 736790..737737 | + | 948 | WP_002941719.1 | carbamate kinase | - |
| K8227_RS03660 (K8227_03665) | 738080..739582 | + | 1503 | WP_011922166.1 | YfcC family protein | - |
| K8227_RS03665 (K8227_03670) | 739701..741041 | + | 1341 | WP_042507187.1 | dipeptidase | - |
| K8227_RS03670 | 741706..743433 | + | 1728 | Protein_679 | family 16 glycosylhydrolase | - |
| K8227_RS03675 | 744106..745341 | + | 1236 | Protein_680 | family 20 glycosylhydrolase | - |
| K8227_RS03680 (K8227_03680) | 745962..746435 | - | 474 | WP_002941715.1 | arginine repressor | - |
| K8227_RS03685 (K8227_03685) | 746484..747512 | - | 1029 | WP_012775031.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|