MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 39696 bp
Accession: NZ_CP082776 Location: 3650576..3690271 Organism: Escherichia coli O4:H5 strain CU532-9 Replicon: chromosome
Accession: NZ_CP082776 Location: 3650576..3690271 Organism: Escherichia coli O4:H5 strain CU532-9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B92_RS17625 (3646646) | 3646646..3647209 | + | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| K8B92_RS17630 (3647206) | 3647206..3648165 | + | 960 | WP_001535517.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| K8B92_RS17635 (3648176) | 3648176..3648547 | + | 372 | WP_000216207.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| K8B92_RS17640 (3648551) | 3648551..3649330 | + | 780 | WP_001077354.1 | sorbitol-6-phosphate dehydrogenase | - |
| K8B92_RS17645 (3649436) | 3649436..3649795 | + | 360 | WP_001536245.1 | transcriptional regulator GutM | - |
| K8B92_RS17650 (3649862) | 3649862..3650635 | + | 774 | WP_000804544.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| K8B92_RS17655 (3650628) | 3650628..3651593 | + | 966 | WP_001287423.1 | Arabinose 5-phosphate isomerase GutQ | VF |
| K8B92_RS17660 (3651590) | 3651590..3653104 | - | 1515 | WP_000010760.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| K8B92_RS17665 (3653291) | 3653291..3654730 | + | 1440 | WP_000029647.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| K8B92_RS17670 (3654727) | 3654727..3655860 | + | 1134 | WP_000064713.1 | NADH:flavorubredoxin reductase NorW | - |
| K8B92_RS17675 (3656084) | 3656084..3658336 | - | 2253 | WP_001535518.1 | carbamoyltransferase HypF | - |
| K8B92_RS17680 (3658489) | 3658489..3659016 | - | 528 | WP_001078777.1 | electron transport protein HydN | - |
| K8B92_RS17685 (3659401) | 3659401..3659829 | + | 429 | WP_000536066.1 | DUF4259 domain-containing protein | - |
| K8B92_RS17690 (3659921) | 3659921..3660340 | - | 420 | WP_000126304.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| K8B92_RS17695 (3660337) | 3660337..3660648 | - | 312 | WP_000547563.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| K8B92_RS17700 (3660811) | 3660811..3661566 | - | 756 | WP_001314074.1 | hypothetical protein | - |
| K8B92_RS17705 (3661609) | 3661609..3662076 | - | 468 | WP_000132955.1 | hydrogenase maturation peptidase HycI | - |
| K8B92_RS17710 (3662069) | 3662069..3662479 | - | 411 | WP_001291918.1 | formate hydrogenlyase assembly protein HycH | - |
| K8B92_RS17715 (3662476) | 3662476..3663243 | - | 768 | WP_000067399.1 | formate hydrogenlyase subunit HycG | - |
| K8B92_RS17720 (3663243) | 3663243..3663785 | - | 543 | WP_000493800.1 | formate hydrogenlyase subunit HycF | - |
| K8B92_RS17725 (3663795) | 3663795..3665504 | - | 1710 | WP_001288123.1 | formate hydrogenlyase subunit HycE | - |
| K8B92_RS17730 (3665522) | 3665522..3666445 | - | 924 | WP_000115226.1 | formate hydrogenlyase subunit HycD | - |
| K8B92_RS17735 (3666448) | 3666448..3668274 | - | 1827 | WP_001274429.1 | formate hydrogenlyase subunit 3 | - |
| K8B92_RS17740 (3668271) | 3668271..3668882 | - | 612 | WP_001079173.1 | formate hydrogenlyase subunit HycB | - |
| K8B92_RS17745 (3669007) | 3669007..3669468 | - | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| K8B92_RS17750 (3669680) | 3669680..3670030 | + | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| K8B92_RS17755 (3670034) | 3670034..3670906 | + | 873 | WP_000337654.1 | hydrogenase nickel incorporation protein HypB | - |
| K8B92_RS17760 (3670897) | 3670897..3671169 | + | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| K8B92_RS17765 (3671169) | 3671169..3672290 | + | 1122 | WP_001212967.1 | hydrogenase formation protein HypD | - |
| K8B92_RS17770 (3672287) | 3672287..3673297 | + | 1011 | WP_001059916.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| K8B92_RS17775 (3673371) | 3673371..3673847 | + | 477 | Protein_3460 | formate hydrogenlyase transcriptional activator FlhA | - |
| K8B92_RS17785 (3674619) | 3674619..3676226 | + | 1608 | Protein_3462 | Formate hydrogenlyase transcriptional activator FhlA | VF |
| K8B92_RS17790 (3676271) | 3676271..3676699 | + | 429 | WP_000301062.1 | TOBE domain-containing protein | - |
| K8B92_RS17795 (3676738) | 3676738..3677082 | - | 345 | WP_000015482.1 | nitrous oxide-stimulated promoter family protein | - |
| K8B92_RS17800 (3678154) | 3678154..3679962 | - | 1809 | WP_000710784.1 | DUF4209 domain-containing protein | - |
| K8B92_RS17805 (3680224) | 3680224..3680661 | + | 438 | WP_001536247.1 | hypothetical protein | - |
| K8B92_RS17810 (3680630) | 3680630..3681829 | + | 1200 | WP_001536248.1 | relaxase/mobilization nuclease domain-containing protein | - |
| K8B92_RS17815 (3682009) | 3682009..3682281 | + | 273 | WP_000043831.1 | hypothetical protein | - |
| K8B92_RS17820 (3682414) | 3682414..3682839 | - | 426 | WP_000336170.1 | hypothetical protein | - |
| K8B92_RS17825 (3683751) | 3683751..3684266 | + | 516 | WP_000611155.1 | helix-turn-helix domain-containing protein | - |
| K8B92_RS17830 (3684391) | 3684391..3685374 | - | 984 | WP_000020904.1 | hypothetical protein | - |
| K8B92_RS17835 (3685534) | 3685534..3686118 | - | 585 | WP_042051186.1 | hypothetical protein | - |
| K8B92_RS17840 (3686130) | 3686130..3687587 | - | 1458 | WP_000784515.1 | hypothetical protein ; Integrase | Integrase |
| K8B92_RS17845 (3687734) | 3687734..3690301 | + | 2568 | WP_001467843.1 | DNA mismatch repair protein MutS | - |
| K8B92_RS17850 (3690407) | 3690407..3691063 | + | 657 | WP_001141304.1 | protein-serine/threonine phosphatase | - |
| K8B92_RS17855 (3691114) | 3691114..3691881 | - | 768 | WP_001298167.1 | DNA-binding transcriptional repressor YgbI | - |
| K8B92_RS17860 (3692077) | 3692077..3692985 | + | 909 | WP_000847998.1 | NAD(P)-dependent oxidoreductase | - |
| K8B92_RS17865 (3692982) | 3692982..3694244 | + | 1263 | WP_000590416.1 | four-carbon acid sugar kinase family protein | - |
| K8B92_RS17870 (3694241) | 3694241..3694879 | + | 639 | WP_001278992.1 | aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|