MGE detailed information
MGE type: Genomic_island MGE length: 25712 bp
Accession: NZ_CP082775 Location: 469002..494713 Organism: Escherichia coli O25:H4 strain CU568-3 Replicon: chromosome
Accession: NZ_CP082775 Location: 469002..494713 Organism: Escherichia coli O25:H4 strain CU568-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B89_RS02145 (465850) | 465850..466569 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| K8B89_RS02150 (466566) | 466566..468197 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| K8B89_RS02155 (468378) | 468378..468608 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| K8B89_RS02160 (468620) | 468620..468892 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| K8B89_RS02165 (469002) | 469002..471539 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| K8B89_RS02170 (471572) | 471572..472264 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| K8B89_RS02175 (472329) | 472329..472853 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| K8B89_RS02180 (473253) | 473253..477065 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| K8B89_RS02185 (477963) | 477963..478793 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| K8B89_RS02190 (479942) | 479942..483871 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| K8B89_RS02195 (484085) | 484085..484357 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| K8B89_RS02200 (484585) | 484585..484881 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| K8B89_RS02205 (484909) | 484909..485082 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| K8B89_RS02210 (485201) | 485201..486718 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| K8B89_RS02215 (486955) | 486955..488412 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| K8B89_RS02220 (488471) | 488471..490618 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| K8B89_RS02225 (490698) | 490698..492032 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| K8B89_RS02230 (492492) | 492492..493189 | + | 698 | WP_223216367.1 | IS1 family transposase | - |
| K8B89_RS02235 (493124) | 493124..494713 | - | 1590 | WP_234278524.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| K8B89_RS02240 (494973) | 494973..495132 | - | 160 | Protein_420 | integrase | - |
| K8B89_RS02250 (495512) | 495512..496087 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| K8B89_RS02255 (496124) | 496124..497821 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| K8B89_RS02260 (497797) | 497797..498135 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| K8B89_RS02265 (498251) | 498251..499552 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|