MGE detailed information
MGE type: Prophage MGE length: 38859 bp
Accession: NZ_CP081858 Location: 2576542..2615400 Organism: Salmonella enterica subsp. enterica serovar Schwarzengrund strain S16 Replicon: chromosome
Accession: NZ_CP081858 Location: 2576542..2615400 Organism: Salmonella enterica subsp. enterica serovar Schwarzengrund strain S16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6B66_RS12695 () | 2572271..2572729 | + | 459 | WP_000156280.1 | DUF986 family protein | - |
| K6B66_RS12700 () | 2573139..2573705 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| K6B66_RS12705 () | 2573702..2574511 | - | 810 | WP_000010916.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| K6B66_RS12710 () | 2574577..2576322 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| K6B66_RS12715 () | 2576542..2576751 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| K6B66_RS12720 () | 2576764..2576907 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| K6B66_RS12725 () | 2577556..2577843 | - | 288 | WP_001000660.1 | YebO family protein | - |
| K6B66_RS12730 () | 2577914..2578057 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| K6B66_RS12735 () | 2578215..2578454 | + | 240 | WP_001236778.1 | invasion protein YobH | - |
| K6B66_RS12740 () | 2578666..2579457 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| K6B66_RS12745 () | 2579633..2581006 | + | 1374 | WP_000416144.1 | MFS transporter | - |
| K6B66_RS12750 () | 2581054..2581935 | - | 882 | WP_000984498.1 | protease HtpX | - |
| K6B66_RS12755 () | 2582128..2584176 | - | 2049 | WP_001091241.1 | carboxy terminal-processing peptidase | - |
| K6B66_RS12760 () | 2584196..2584882 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| K6B66_RS12765 () | 2584980..2585477 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| K6B66_RS12770 () | 2585606..2586889 | + | 1284 | WP_222345040.1 | membrane integrity lipid transport subunit YebS | - |
| K6B66_RS12775 () | 2586858..2589491 | + | 2634 | WP_001530909.1 | hypothetical protein | VF |
| K6B66_RS12780 () | 2589569..2591008 | + | 1440 | WP_001530936.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K6B66_RS12785 () | 2591125..2591361 | + | 237 | WP_024131167.1 | YebV family protein | - |
| K6B66_RS12790 () | 2591472..2591663 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| K6B66_RS12795 () | 2591682..2592332 | - | 651 | WP_000986166.1 | protein-serine/threonine phosphatase | - |
| K6B66_RS12800 () | 2592557..2592721 | - | 165 | WP_001134850.1 | hypothetical protein | - |
| K6B66_RS12805 () | 2593006..2593728 | - | 723 | WP_000182069.1 | Guanine nucleotide exchange factor sopE2 | VF |
| K6B66_RS12810 () | 2594412..2594807 | + | 396 | WP_000422883.1 | DUF1398 domain-containing protein | - |
| K6B66_RS12815 () | 2595135..2595611 | + | 477 | WP_000102094.1 | hypothetical protein | - |
| K6B66_RS12820 () | 2595999..2596418 | - | 420 | WP_000354406.1 | GNAT family N-acetyltransferase | - |
| K6B66_RS12825 () | 2596547..2596747 | - | 201 | WP_000007801.1 | hypothetical protein | - |
| K6B66_RS12830 () | 2596787..2597056 | + | 270 | WP_077906414.1 | hypothetical protein | - |
| K6B66_RS12835 () | 2597222..2597362 | + | 141 | WP_001604859.1 | hypothetical protein | - |
| K6B66_RS12840 () | 2597508..2597860 | - | 353 | Protein_2520 | IS256 family transposase ISEc39 | Transposase |
| K6B66_RS12845 () | 2598012..2598575 | + | 564 | Protein_2521 | fimbrial protein | - |
| K6B66_RS12850 () | 2599366..2600280 | + | 915 | WP_046380654.1 | DMT family transporter | - |
| K6B66_RS12855 () | 2600413..2600571 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| K6B66_RS12860 () | 2600581..2601195 | + | 615 | WP_000848064.1 | disulfide bond formation protein B | - |
| K6B66_RS23725 () | 2601522..2601754 | - | 233 | Protein_2525 | helix-turn-helix domain-containing protein | - |
| K6B66_RS12870 () | 2602343..2602468 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| K6B66_RS23730 () | 2602468..2602648 | + | 181 | Protein_2527 | IS3 family transposase | - |
| K6B66_RS12875 () | 2603038..2603238 | + | 201 | WP_031615635.1 | PagK family vesicle-borne virulence factor | - |
| K6B66_RS23735 () | 2603335..2603682 | - | 348 | Protein_2529 | tail assembly chaperone | - |
| K6B66_RS12880 () | 2603683..2604738 | - | 1056 | Protein_2530 | tail fiber protein | - |
| K6B66_RS12885 () | 2604662..2605229 | - | 568 | Protein_2531 | phage terminase large subunit family protein | - |
| K6B66_RS12890 () | 2605216..2605707 | - | 492 | WP_000348547.1 | DUF1441 family protein | - |
| K6B66_RS12895 () | 2606010..2606177 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| K6B66_RS12900 () | 2606434..2606966 | - | 533 | Protein_2534 | DUF2514 domain-containing protein | - |
| K6B66_RS12905 () | 2606963..2607211 | - | 249 | Protein_2535 | glycoside hydrolase family 19 protein | - |
| K6B66_RS12910 () | 2607203..2608351 | + | 1149 | Protein_2536 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| K6B66_RS12915 () | 2608384..2609463 | + | 1080 | WP_000087641.1 | hypothetical protein ; Integrase | Integrase |
| - | 2609592..2609735 | + | 144 | - | - | Antitoxin Detail |
| - | 2609594..2609697 | - | 104 | - | - | Toxin Detail |
| K6B66_RS12920 () | 2609838..2610191 | - | 354 | WP_000722363.1 | YebY family protein | - |
| K6B66_RS12925 () | 2610208..2611083 | - | 876 | WP_000979695.1 | copper homeostasis membrane protein CopD | - |
| K6B66_RS12930 () | 2611084..2611458 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| K6B66_RS12935 () | 2611596..2611826 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| K6B66_RS12940 () | 2611934..2612590 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| K6B66_RS12945 () | 2612614..2613312 | + | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| K6B66_RS12950 () | 2613349..2615400 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| K6B66_RS12955 () | 2615613..2616272 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| K6B66_RS12960 () | 2616366..2616719 | - | 354 | WP_001042123.1 | protein YebF | - |
| K6B66_RS12965 () | 2616787..2617077 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| K6B66_RS12970 () | 2617208..2618386 | + | 1179 | WP_000173436.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| K6B66_RS12975 () | 2618486..2619127 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|