MGE detailed information
MGE type: Prophage MGE length: 81958 bp
Accession: NZ_CP081774 Location: 1187569..1269526 Organism: Escherichia coli strain 0H24 Replicon: chromosome
Accession: NZ_CP081774 Location: 1187569..1269526 Organism: Escherichia coli strain 0H24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O11_RS05805 (1186220) | 1186220..1186843 | + | 624 | WP_016243807.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| J6O11_RS05810 (1186847) | 1186847..1187536 | + | 690 | WP_016243806.1 | hypothetical protein | - |
| J6O11_RS05815 (1187569) | 1187569..1188738 | - | 1170 | WP_016243805.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| J6O11_RS05820 (1188699) | 1188699..1188905 | - | 207 | WP_001331174.1 | hypothetical protein | - |
| J6O11_RS05825 (1188965) | 1188965..1189180 | - | 216 | WP_001331173.1 | hypothetical protein | - |
| J6O11_RS05830 (1189177) | 1189177..1189539 | - | 363 | WP_001222408.1 | phage protein | - |
| J6O11_RS05835 (1189530) | 1189530..1190066 | - | 537 | WP_000008202.1 | 5'-deoxynucleotidase | - |
| J6O11_RS05840 (1190194) | 1190194..1191018 | - | 825 | WP_000081294.1 | YfdQ family protein | - |
| J6O11_RS05845 (1191083) | 1191083..1191445 | - | 363 | WP_000135680.1 | protein YfdP | - |
| J6O11_RS05850 (1191460) | 1191460..1191770 | - | 311 | Protein_1144 | hypothetical protein | - |
| J6O11_RS05855 (1192046) | 1192046..1192321 | - | 276 | WP_021563905.1 | hypothetical protein | - |
| J6O11_RS05860 (1192528) | 1192528..1193154 | - | 627 | WP_000450737.1 | LexA family transcriptional regulator | - |
| J6O11_RS05865 (1193252) | 1193252..1193452 | + | 201 | WP_000205494.1 | Cro/CI family transcriptional regulator | - |
| J6O11_RS05870 (1193490) | 1193490..1194047 | + | 558 | WP_000515869.1 | protein YmfL | - |
| J6O11_RS05875 (1194223) | 1194223..1194402 | + | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| J6O11_RS05880 (1194392) | 1194392..1195333 | + | 942 | WP_000104954.1 | helix-turn-helix domain-containing protein | - |
| J6O11_RS05885 (1195330) | 1195330..1195824 | + | 495 | WP_077125183.1 | PerC family transcriptional regulator | - |
| J6O11_RS05890 (1195824) | 1195824..1196477 | + | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| J6O11_RS05895 (1196474) | 1196474..1196800 | + | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| J6O11_RS05900 (1196797) | 1196797..1197186 | + | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| J6O11_RS05905 (1197206) | 1197206..1198015 | + | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| J6O11_RS05910 (1198023) | 1198023..1199012 | + | 990 | WP_061157959.1 | DUF968 domain-containing protein | - |
| J6O11_RS05915 (1199030) | 1199030..1199371 | + | 342 | WP_001205460.1 | antiterminator Q family protein | - |
| J6O11_RS05920 (1199384) | 1199384..1199932 | - | 549 | WP_001131905.1 | hypothetical protein | - |
| J6O11_RS05925 (1199919) | 1199919..1200845 | - | 927 | WP_000868396.1 | hypothetical protein | - |
| J6O11_RS05930 (1201026) | 1201026..1201313 | + | 288 | WP_223276187.1 | hypothetical protein | - |
| J6O11_RS05935 (1201464) | 1201464..1202516 | + | 1053 | WP_016243801.1 | site-specific DNA-methyltransferase | - |
| J6O11_RS05940 (1202584) | 1202584..1202799 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| J6O11_RS05945 (1202799) | 1202799..1203296 | + | 498 | WP_001135250.1 | lysozyme RrrD | - |
| J6O11_RS27330 (1203293) | 1203293..1203760 | + | 468 | WP_016243800.1 | lysis protein | - |
| J6O11_RS05960 (1203748) | 1203748..1203900 | + | 153 | WP_001139675.1 | hypothetical protein | - |
| J6O11_RS05965 (1204576) | 1204576..1205070 | + | 495 | WP_000373425.1 | DUF1441 family protein | - |
| J6O11_RS05970 (1205070) | 1205070..1207172 | + | 2103 | WP_023307630.1 | phage terminase large subunit family protein | - |
| J6O11_RS05975 (1207169) | 1207169..1207381 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| J6O11_RS05980 (1207381) | 1207381..1208889 | + | 1509 | WP_016243798.1 | phage portal protein | - |
| J6O11_RS05985 (1208834) | 1208834..1210861 | + | 2028 | WP_016243797.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| J6O11_RS05990 (1210948) | 1210948..1211271 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| J6O11_RS05995 (1211264) | 1211264..1211539 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| J6O11_RS06000 (1211551) | 1211551..1212129 | + | 579 | WP_000677102.1 | phage tail protein | - |
| J6O11_RS06005 (1212126) | 1212126..1212527 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| J6O11_RS06010 (1212538) | 1212538..1213281 | + | 744 | WP_000211129.1 | phage tail protein | - |
| J6O11_RS06015 (1213342) | 1213342..1213728 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| J6O11_RS06020 (1213737) | 1213737..1214066 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| J6O11_RS06025 (1214038) | 1214038..1217103 | + | 3066 | WP_052994248.1 | phage tail tape measure protein | - |
| J6O11_RS06030 (1217103) | 1217103..1217432 | + | 330 | WP_000447253.1 | phage tail protein | - |
| J6O11_RS06035 (1217442) | 1217442..1218140 | + | 699 | WP_104457560.1 | phage minor tail protein L | - |
| J6O11_RS06040 (1218146) | 1218146..1218889 | + | 744 | WP_223584383.1 | C40 family peptidase | - |
| J6O11_RS06045 (1218787) | 1218787..1219434 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| J6O11_RS06050 (1219495) | 1219495..1222992 | + | 3498 | WP_016243793.1 | host specificity protein J | - |
| J6O11_RS06055 (1223063) | 1223063..1223662 | + | 600 | WP_001233071.1 | hypothetical protein | VF |
| J6O11_RS06060 (1223727) | 1223727..1226687 | + | 2961 | WP_000279163.1 | phage tail protein | - |
| J6O11_RS06065 (1226687) | 1226687..1227271 | + | 585 | WP_016243792.1 | tail fiber assembly protein | - |
| J6O11_RS06070 (1227341) | 1227341..1228114 | - | 774 | WP_000355482.1 | hypothetical protein | - |
| J6O11_RS06075 (1228521) | 1228521..1229954 | + | 1434 | WP_001288444.1 | DNA cytosine methyltransferase | - |
| J6O11_RS06080 (1229989) | 1229989..1231203 | - | 1215 | WP_012602456.1 | type II restriction endonuclease | - |
| J6O11_RS06085 (1231633) | 1231633..1231962 | - | 330 | WP_016243791.1 | TA system toxin CbtA family protein | Toxin Detail |
| J6O11_RS06090 (1231983) | 1231983..1232303 | - | 321 | WP_016243790.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| J6O11_RS06095 (1232321) | 1232321..1232542 | - | 222 | WP_016243789.1 | DUF987 domain-containing protein | - |
| J6O11_RS06100 (1232551) | 1232551..1233033 | - | 483 | WP_016243788.1 | DNA repair protein RadC | - |
| J6O11_RS06105 (1233042) | 1233042..1233500 | - | 459 | WP_016243787.1 | antirestriction protein | - |
| J6O11_RS06110 (1233663) | 1233663..1233754 | - | 92 | Protein_1195 | DUF905 domain-containing protein | - |
| J6O11_RS06115 (1233988) | 1233988..1234724 | + | 737 | Protein_1196 | IS3 family transposase IS629 | Transposase |
| J6O11_RS06120 (1235397) | 1235397..1236905 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| J6O11_RS06125 (1236989) | 1236989..1237468 | + | 480 | Protein_1198 | IS3 family transposase ISEc25 | Transposase |
| J6O11_RS06130 (1237699) | 1237699..1238139 | - | 441 | WP_016243785.1 | hypothetical protein | - |
| J6O11_RS06135 (1238485) | 1238485..1240107 | + | 1623 | WP_016243784.1 | hypothetical protein | - |
| J6O11_RS06140 (1240729) | 1240729..1241196 | - | 468 | WP_016243783.1 | protein YfjT | - |
| J6O11_RS06145 (1241220) | 1241220..1241663 | - | 444 | WP_016243782.1 | hypothetical protein | - |
| J6O11_RS06150 (1241653) | 1241653..1241898 | - | 246 | WP_016243781.1 | protein YpjK | - |
| J6O11_RS06155 (1241939) | 1241939..1242640 | - | 702 | WP_016243780.1 | WYL domain-containing protein | - |
| J6O11_RS06160 (1242857) | 1242857..1243678 | - | 822 | WP_016243779.1 | DUF932 domain-containing protein | - |
| J6O11_RS06165 (1243770) | 1243770..1244633 | - | 864 | WP_016243778.1 | GTPase family protein | - |
| J6O11_RS06170 (1245061) | 1245061..1245966 | + | 906 | WP_016243777.1 | WYL domain-containing protein | - |
| J6O11_RS06175 (1245966) | 1245966..1249244 | + | 3279 | WP_016243776.1 | helicase-related protein | - |
| J6O11_RS06180 (1249241) | 1249241..1249942 | + | 702 | WP_115186673.1 | DUF4391 domain-containing protein | - |
| J6O11_RS06185 (1249939) | 1249939..1252641 | + | 2703 | WP_115186674.1 | ATP-binding domain-containing protein | - |
| J6O11_RS06190 (1252716) | 1252716..1253408 | + | 693 | WP_223584384.1 | site-specific DNA-methyltransferase | - |
| J6O11_RS06195 (1253365) | 1253365..1254516 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| J6O11_RS06200 (1254575) | 1254575..1255909 | + | 1335 | WP_250112417.1 | DNA methyltransferase | - |
| J6O11_RS06205 (1255920) | 1255920..1258991 | + | 3072 | WP_115186676.1 | DEAD/DEAH box helicase family protein | - |
| J6O11_RS06210 (1259311) | 1259311..1261962 | + | 2652 | WP_115186677.1 | AAA family ATPase | - |
| J6O11_RS06215 (1261983) | 1261983..1262180 | + | 198 | WP_016243766.1 | ATP-binding protein | - |
| J6O11_RS06220 (1262184) | 1262184..1262864 | + | 681 | WP_016243765.1 | ATP-binding protein | - |
| J6O11_RS06225 (1262952) | 1262952..1263215 | + | 264 | WP_223584385.1 | ATP-binding protein | - |
| J6O11_RS06230 (1263292) | 1263292..1263912 | - | 621 | WP_016243764.1 | inovirus Gp2 family protein | - |
| J6O11_RS06235 (1264141) | 1264141..1265369 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| J6O11_RS06240 (1265491) | 1265491..1266888 | - | 1398 | WP_024191360.1 | YfjI family protein | - |
| J6O11_RS06245 (1267011) | 1267011..1267223 | - | 213 | WP_001549567.1 | AlpA family transcriptional regulator | - |
| J6O11_RS06250 (1267349) | 1267349..1268227 | + | 879 | WP_016243762.1 | hypothetical protein | - |
| J6O11_RS06255 (1268285) | 1268285..1269526 | - | 1242 | WP_016243761.1 | hypothetical protein ; Integrase | Integrase |
| J6O11_RS06265 (1270307) | 1270307..1270789 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| J6O11_RS06270 (1270960) | 1270960..1271397 | + | 438 | WP_001341638.1 | type II toxin-antitoxin system toxin RatA | - |
| J6O11_RS06275 (1271387) | 1271387..1271677 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| J6O11_RS06280 (1271739) | 1271739..1272080 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| J6O11_RS06285 (1272229) | 1272229..1273890 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|