MGE detailed information
MGE type: Genomic_island MGE length: 26806 bp
Accession: NZ_CP081742 Location: 4409839..4436644 Organism: Escherichia coli strain CX15 Replicon: chromosome
Accession: NZ_CP081742 Location: 4409839..4436644 Organism: Escherichia coli strain CX15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O52_RS21590 (4406281) | 4406281..4407000 | + | 720 | WP_001102105.1 | (Fe-S)-binding protein | - |
| J6O52_RS21595 (4407011) | 4407011..4408438 | + | 1428 | WP_001547749.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| J6O52_RS21600 (4408431) | 4408431..4409126 | + | 696 | WP_000370411.1 | lactate utilization protein C | - |
| J6O52_RS21605 (4409176) | 4409176..4409589 | - | 414 | Protein_4235 | gluconate permease | - |
| J6O52_RS21610 (4409839) | 4409839..4410819 | + | 981 | WP_001547750.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O52_RS21615 (4410968) | 4410968..4411660 | + | 693 | Protein_4237 | Tyrosine-protein kinase etk | VF |
| J6O52_RS21620 (4411780) | 4411780..4413078 | - | 1299 | WP_016239723.1 | bifunctional acid phosphatase/4-phytase | - |
| J6O52_RS21625 (4413158) | 4413158..4413250 | - | 93 | WP_000270305.1 | cytochrome bd-II oxidase subunit CbdX | - |
| J6O52_RS21630 (4413263) | 4413263..4414399 | - | 1137 | WP_000460803.1 | cytochrome d ubiquinol oxidase subunit II | - |
| J6O52_RS21635 (4414411) | 4414411..4415370 | - | 960 | Protein_4241 | cytochrome ubiquinol oxidase subunit I | - |
| J6O52_RS21645 (4415908) | 4415908..4416519 | - | 612 | WP_001547754.1 | inovirus Gp2 family protein | - |
| J6O52_RS21650 (4416924) | 4416924..4417130 | - | 207 | WP_001547758.1 | AlpA family phage regulatory protein | - |
| J6O52_RS21655 (4417580) | 4417580..4418506 | + | 927 | WP_001547760.1 | hypothetical protein | - |
| J6O52_RS21660 (4418613) | 4418613..4419476 | + | 864 | WP_016239725.1 | GTPase family protein | - |
| J6O52_RS21665 (4419568) | 4419568..4420389 | + | 822 | WP_223610821.1 | DUF932 domain-containing protein | - |
| J6O52_RS21670 (4420606) | 4420606..4421307 | + | 702 | WP_016239437.1 | WYL domain-containing protein | - |
| J6O52_RS21675 (4421348) | 4421348..4421584 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O52_RS21680 (4421584) | 4421584..4422027 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| J6O52_RS21685 (4422050) | 4422050..4422517 | + | 468 | WP_001385283.1 | protein YkfB | - |
| J6O52_RS21690 (4422594) | 4422594..4422833 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O52_RS21695 (4422931) | 4422931..4423389 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| J6O52_RS21700 (4423405) | 4423405..4423881 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O52_RS21705 (4423890) | 4423890..4424111 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O52_RS21710 (4424130) | 4424130..4424456 | + | 327 | WP_001548930.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O52_RS21715 (4424546) | 4424546..4424923 | + | 378 | WP_000854726.1 | TA system toxin CbtA family protein | Toxin Detail |
| J6O52_RS21720 (4424920) | 4424920..4425408 | + | 489 | WP_001547769.1 | DUF5983 family protein | - |
| J6O52_RS21725 (4425420) | 4425420..4425617 | + | 198 | WP_000839269.1 | DUF957 domain-containing protein | - |
| J6O52_RS21730 (4425702) | 4425702..4426544 | + | 843 | WP_001547770.1 | DUF4942 domain-containing protein | - |
| J6O52_RS21735 (4427293) | 4427293..4428831 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| J6O52_RS21740 (4429197) | 4429197..4430531 | + | 1335 | WP_099483623.1 | cadaverine/lysine antiporter | - |
| J6O52_RS21745 (4430611) | 4430611..4432758 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| J6O52_RS21750 (4432817) | 4432817..4434274 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| J6O52_RS21755 (4434511) | 4434511..4436028 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| J6O52_RS21760 (4436147) | 4436147..4436320 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| J6O52_RS21765 (4436348) | 4436348..4436644 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| J6O52_RS21770 (4436871) | 4436871..4437143 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| J6O52_RS21775 (4437155) | 4437155..4437385 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| J6O52_RS21780 (4437566) | 4437566..4439197 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| J6O52_RS21785 (4439194) | 4439194..4439913 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|