MGE detailed information
MGE type: Genomic_island MGE length: 36356 bp
Accession: NZ_CP081742 Location: 3843360..3879715 Organism: Escherichia coli strain CX15 Replicon: chromosome
Accession: NZ_CP081742 Location: 3843360..3879715 Organism: Escherichia coli strain CX15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O52_RS18725 (3838384) | 3838384..3838809 | + | 426 | Protein_3675 | IS3 family transposase | - |
| J6O52_RS18730 (3839482) | 3839482..3840990 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| J6O52_RS18735 (3841071) | 3841071..3841559 | + | 489 | Protein_3677 | IS3 family transposase | - |
| J6O52_RS18740 (3841457) | 3841457..3842755 | - | 1299 | WP_000342159.1 | IS256 family transposase | - |
| J6O52_RS18745 (3842973) | 3842973..3843137 | - | 165 | Protein_3679 | transposase domain-containing protein | - |
| J6O52_RS18750 (3843082) | 3843082..3843345 | - | 264 | WP_001247776.1 | transposase | - |
| J6O52_RS18755 (3843360) | 3843360..3843623 | + | 264 | WP_001549018.1 | hypothetical protein | - |
| J6O52_RS18760 (3843852) | 3843852..3844133 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| J6O52_RS18765 (3844168) | 3844168..3844737 | + | 570 | WP_000350435.1 | Spore protein SP21 | VF |
| J6O52_RS18770 (3844843) | 3844843..3847725 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| J6O52_RS18775 (3847725) | 3847725..3847916 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| J6O52_RS18780 (3847977) | 3847977..3849704 | + | 1728 | WP_000412528.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| J6O52_RS18785 (3849792) | 3849792..3850250 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| J6O52_RS18790 (3850273) | 3850273..3851187 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| J6O52_RS18795 (3851290) | 3851290..3852177 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| J6O52_RS18800 (3852267) | 3852267..3852878 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| J6O52_RS18805 (3852958) | 3852958..3854103 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| J6O52_RS18810 (3854093) | 3854093..3854533 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| J6O52_RS18815 (3854537) | 3854537..3856252 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| J6O52_RS18820 (3856249) | 3856249..3856746 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| J6O52_RS18825 (3856724) | 3856724..3857689 | + | 966 | WP_000196689.1 | zinc metalloprotease HtpX | - |
| J6O52_RS18830 (3857714) | 3857714..3858865 | + | 1152 | WP_000323729.1 | Putative serine protease HhoB | VF |
| J6O52_RS18835 (3859090) | 3859090..3859659 | - | 570 | Protein_3697 | IS5 family transposase ISPa16 | Transposase |
| J6O52_RS18840 (3860781) | 3860781..3861644 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| J6O52_RS18845 (3861736) | 3861736..3862557 | + | 822 | WP_000197388.1 | DUF932 domain-containing protein | - |
| J6O52_RS18850 (3862774) | 3862774..3863475 | + | 702 | WP_060616110.1 | WYL domain-containing protein | - |
| J6O52_RS18855 (3863516) | 3863516..3863752 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O52_RS18860 (3863752) | 3863752..3864195 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| J6O52_RS18865 (3864218) | 3864218..3864685 | + | 468 | WP_001385283.1 | protein YkfB | - |
| J6O52_RS18870 (3864762) | 3864762..3865001 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O52_RS18875 (3865099) | 3865099..3865557 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| J6O52_RS18880 (3865573) | 3865573..3866049 | + | 477 | WP_001549015.1 | RadC family protein | - |
| J6O52_RS18885 (3866058) | 3866058..3866279 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O52_RS18890 (3866298) | 3866298..3866615 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O52_RS18895 (3866636) | 3866636..3866977 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O52_RS18900 (3867798) | 3867798..3869264 | - | 1467 | WP_000723924.1 | hypothetical protein | - |
| J6O52_RS18905 (3869580) | 3869580..3869969 | - | 390 | WP_223596848.1 | hypothetical protein | - |
| J6O52_RS18910 (3870213) | 3870213..3870299 | - | 87 | Protein_3712 | capsid protein | - |
| J6O52_RS18915 (3870504) | 3870504..3871277 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| J6O52_RS18920 (3871338) | 3871338..3871892 | - | 555 | WP_000905043.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O52_RS18925 (3871919) | 3871919..3872293 | + | 375 | WP_001372123.1 | hypothetical protein | - |
| J6O52_RS18930 (3872293) | 3872293..3872736 | + | 444 | WP_000978831.1 | tail fiber assembly protein | - |
| J6O52_RS18935 (3872708) | 3872708..3873301 | - | 594 | WP_000613358.1 | tail fiber assembly protein | - |
| J6O52_RS18940 (3873301) | 3873301..3874122 | - | 822 | WP_000554686.1 | hypothetical protein | - |
| J6O52_RS18945 (3874126) | 3874126..3874710 | - | 585 | WP_016243480.1 | YmfQ family protein | - |
| J6O52_RS18950 (3874701) | 3874701..3875759 | - | 1059 | WP_016243479.1 | baseplate J/gp47 family protein | - |
| J6O52_RS18955 (3875746) | 3875746..3876171 | - | 426 | WP_042027905.1 | phage GP46 family protein | - |
| J6O52_RS18960 (3876171) | 3876171..3876719 | - | 549 | WP_001542670.1 | phage baseplate assembly protein V | - |
| J6O52_RS18965 (3876719) | 3876719..3877798 | - | 1080 | WP_016243477.1 | phage tail protein | - |
| J6O52_RS18970 (3877795) | 3877795..3879123 | - | 1329 | WP_016243476.1 | DNA circularization N-terminal domain-containing protein | - |
| J6O52_RS18975 (3879185) | 3879185..3879715 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| J6O52_RS18980 (3879807) | 3879807..3881639 | - | 1833 | WP_016243475.1 | phage tail tape measure protein | - |
| J6O52_RS18985 (3881781) | 3881781..3882050 | - | 270 | WP_000661051.1 | phage tail assembly protein | - |
| J6O52_RS18990 (3882050) | 3882050..3882406 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| J6O52_RS18995 (3882406) | 3882406..3883902 | - | 1497 | WP_001759749.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| J6O52_RS19000 (3883886) | 3883886..3884056 | - | 171 | WP_016243474.1 | DUF2635 domain-containing protein | - |
| J6O52_RS19005 (3884065) | 3884065..3884625 | - | 561 | WP_016243473.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|