MGE detailed information
MGE type: Genomic_island MGE length: 36336 bp
Accession: NZ_CP081719 Location: 3843362..3879697 Organism: Escherichia coli strain CX05 Replicon: chromosome
Accession: NZ_CP081719 Location: 3843362..3879697 Organism: Escherichia coli strain CX05 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O38_RS18730 (3838386) | 3838386..3838811 | + | 426 | Protein_3676 | IS3 family transposase | - |
| J6O38_RS18735 (3839484) | 3839484..3840992 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| J6O38_RS18740 (3841073) | 3841073..3841561 | + | 489 | Protein_3678 | IS3 family transposase | - |
| J6O38_RS18745 (3841459) | 3841459..3842757 | - | 1299 | WP_000342159.1 | IS256 family transposase | - |
| J6O38_RS18750 (3842975) | 3842975..3843139 | - | 165 | Protein_3680 | transposase domain-containing protein | - |
| J6O38_RS18755 (3843084) | 3843084..3843347 | - | 264 | WP_001247776.1 | transposase | - |
| J6O38_RS18760 (3843362) | 3843362..3843625 | + | 264 | WP_001549018.1 | hypothetical protein | - |
| J6O38_RS18765 (3843854) | 3843854..3844135 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| J6O38_RS18770 (3844170) | 3844170..3844739 | + | 570 | WP_000350435.1 | Spore protein SP21 | VF |
| J6O38_RS18775 (3844845) | 3844845..3847727 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| J6O38_RS18780 (3847727) | 3847727..3847918 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| J6O38_RS18785 (3847979) | 3847979..3849706 | + | 1728 | WP_000412528.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| J6O38_RS18790 (3849794) | 3849794..3850252 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| J6O38_RS18795 (3850275) | 3850275..3851189 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| J6O38_RS18800 (3851292) | 3851292..3852179 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| J6O38_RS18805 (3852269) | 3852269..3852880 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| J6O38_RS18810 (3852960) | 3852960..3854105 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| J6O38_RS18815 (3854095) | 3854095..3854535 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| J6O38_RS18820 (3854539) | 3854539..3856254 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| J6O38_RS18825 (3856251) | 3856251..3856748 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| J6O38_RS18830 (3856726) | 3856726..3857691 | + | 966 | WP_000196689.1 | zinc metalloprotease HtpX | - |
| J6O38_RS18835 (3857716) | 3857716..3858867 | + | 1152 | WP_000323729.1 | Putative serine protease HhoB | VF |
| J6O38_RS18840 (3859092) | 3859092..3859661 | - | 570 | Protein_3698 | IS5 family transposase ISPa16 | Transposase |
| J6O38_RS18845 (3860763) | 3860763..3861626 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| J6O38_RS18850 (3861718) | 3861718..3862539 | + | 822 | WP_000197388.1 | DUF932 domain-containing protein | - |
| J6O38_RS18855 (3862756) | 3862756..3863457 | + | 702 | WP_060616110.1 | WYL domain-containing protein | - |
| J6O38_RS18860 (3863498) | 3863498..3863734 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O38_RS18865 (3863734) | 3863734..3864177 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| J6O38_RS18870 (3864200) | 3864200..3864667 | + | 468 | WP_001385283.1 | protein YkfB | - |
| J6O38_RS18875 (3864744) | 3864744..3864983 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O38_RS18880 (3865081) | 3865081..3865539 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| J6O38_RS18885 (3865555) | 3865555..3866031 | + | 477 | WP_001549015.1 | RadC family protein | - |
| J6O38_RS18890 (3866040) | 3866040..3866261 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O38_RS18895 (3866280) | 3866280..3866597 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O38_RS18900 (3866618) | 3866618..3866959 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O38_RS18905 (3867780) | 3867780..3869246 | - | 1467 | WP_000723924.1 | hypothetical protein | - |
| J6O38_RS18910 (3869562) | 3869562..3869951 | - | 390 | WP_223596848.1 | hypothetical protein | - |
| J6O38_RS18915 (3870195) | 3870195..3870281 | - | 87 | Protein_3713 | capsid protein | - |
| J6O38_RS18920 (3870486) | 3870486..3871259 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| J6O38_RS18925 (3871320) | 3871320..3871874 | - | 555 | WP_000905043.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O38_RS18930 (3871901) | 3871901..3872275 | + | 375 | WP_001372123.1 | hypothetical protein | - |
| J6O38_RS18935 (3872275) | 3872275..3872718 | + | 444 | WP_000978831.1 | tail fiber assembly protein | - |
| J6O38_RS18940 (3872690) | 3872690..3873283 | - | 594 | WP_000613358.1 | tail fiber assembly protein | - |
| J6O38_RS18945 (3873283) | 3873283..3874104 | - | 822 | WP_000554686.1 | hypothetical protein | - |
| J6O38_RS18950 (3874108) | 3874108..3874692 | - | 585 | WP_016243480.1 | YmfQ family protein | - |
| J6O38_RS18955 (3874683) | 3874683..3875741 | - | 1059 | WP_016243479.1 | baseplate J/gp47 family protein | - |
| J6O38_RS18960 (3875728) | 3875728..3876153 | - | 426 | WP_042027905.1 | phage GP46 family protein | - |
| J6O38_RS18965 (3876153) | 3876153..3876701 | - | 549 | WP_001542670.1 | phage baseplate assembly protein V | - |
| J6O38_RS18970 (3876701) | 3876701..3877780 | - | 1080 | WP_016243477.1 | phage tail protein | - |
| J6O38_RS18975 (3877777) | 3877777..3879105 | - | 1329 | WP_016243476.1 | DNA circularization N-terminal domain-containing protein | - |
| J6O38_RS18980 (3879167) | 3879167..3879697 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| J6O38_RS18985 (3879789) | 3879789..3881621 | - | 1833 | WP_016243475.1 | phage tail tape measure protein | - |
| J6O38_RS18990 (3881763) | 3881763..3882032 | - | 270 | WP_000661051.1 | phage tail assembly protein | - |
| J6O38_RS18995 (3882032) | 3882032..3882388 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| J6O38_RS19000 (3882388) | 3882388..3883884 | - | 1497 | WP_001759749.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| J6O38_RS19005 (3883868) | 3883868..3884038 | - | 171 | WP_016243474.1 | DUF2635 domain-containing protein | - |
| J6O38_RS19010 (3884047) | 3884047..3884607 | - | 561 | WP_016243473.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|