MGE detailed information
MGE type: Prophage MGE length: 48937 bp
Accession: NZ_CP081698 Location: 3694942..3743878 Organism: Escherichia coli strain CT02 Replicon: chromosome
Accession: NZ_CP081698 Location: 3694942..3743878 Organism: Escherichia coli strain CT02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6N91_RS17815 (3690920) | 3690920..3692071 | + | 1152 | WP_000323729.1 | trypsin-like peptidase domain-containing protein | - |
| J6N91_RS17820 (3692296) | 3692296..3692865 | - | 570 | Protein_3485 | IS5 family transposase | - |
| J6N91_RS17825 (3693987) | 3693987..3694850 | + | 864 | WP_016154552.1 | GTPase family protein | - |
| J6N91_RS17830 (3694942) | 3694942..3695763 | + | 822 | WP_001548153.1 | DUF932 domain-containing protein | - |
| J6N91_RS17835 (3695980) | 3695980..3696681 | + | 702 | WP_021553244.1 | WYL domain-containing protein | - |
| J6N91_RS17840 (3696722) | 3696722..3696958 | + | 237 | WP_001144029.1 | protein YpjK | - |
| J6N91_RS17845 (3696958) | 3696958..3697401 | + | 444 | WP_021553245.1 | lipoprotein YfjS | - |
| J6N91_RS17850 (3697424) | 3697424..3697891 | + | 468 | WP_001385283.1 | protein YkfB | - |
| J6N91_RS17855 (3697968) | 3697968..3698207 | + | 240 | Protein_3492 | DUF905 domain-containing protein | - |
| J6N91_RS17860 (3698305) | 3698305..3698763 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| J6N91_RS17865 (3698779) | 3698779..3699255 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6N91_RS17870 (3699264) | 3699264..3699485 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6N91_RS17875 (3699504) | 3699504..3699821 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6N91_RS17880 (3699842) | 3699842..3700183 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6N91_RS17885 (3701004) | 3701004..3702470 | - | 1467 | WP_181678683.1 | hypothetical protein | - |
| J6N91_RS17890 (3702786) | 3702786..3703175 | - | 390 | WP_223602057.1 | hypothetical protein | - |
| J6N91_RS17895 (3703711) | 3703711..3704484 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| J6N91_RS17900 (3704545) | 3704545..3705099 | - | 555 | WP_000904981.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6N91_RS17905 (3705126) | 3705126..3705665 | + | 540 | WP_223602058.1 | phage tail protein | - |
| J6N91_RS17910 (3705665) | 3705665..3706267 | + | 603 | WP_097494789.1 | tail fiber assembly protein | - |
| J6N91_RS17915 (3706239) | 3706239..3706652 | - | 414 | WP_010723096.1 | tail assembly chaperone | - |
| J6N91_RS17920 (3706654) | 3706654..3707283 | - | 630 | WP_223602059.1 | protein StfP | - |
| J6N91_RS17925 (3707287) | 3707287..3707871 | - | 585 | WP_223602060.1 | YmfQ family protein | - |
| J6N91_RS17930 (3707862) | 3707862..3708920 | - | 1059 | WP_223602061.1 | baseplate J/gp47 family protein | - |
| J6N91_RS17935 (3708907) | 3708907..3709332 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| J6N91_RS17940 (3709332) | 3709332..3709880 | - | 549 | WP_001259087.1 | phage baseplate assembly protein V | - |
| J6N91_RS17945 (3709880) | 3709880..3710959 | - | 1080 | WP_072665287.1 | baseplate protein | - |
| J6N91_RS17950 (3710956) | 3710956..3711777 | - | 822 | Protein_3511 | DNA circularization protein | - |
| J6N91_RS17955 (3711776) | 3711776..3713266 | - | 1491 | Protein_3512 | terminase large subunit | - |
| J6N91_RS17960 (3713263) | 3713263..3713757 | - | 495 | WP_000929173.1 | phage terminase small subunit P27 family | - |
| J6N91_RS17965 (3713884) | 3713884..3714234 | - | 351 | WP_032201150.1 | HNH endonuclease signature motif containing protein | - |
| J6N91_RS17970 (3714337) | 3714337..3714900 | - | 564 | WP_050437385.1 | hypothetical protein | - |
| J6N91_RS17975 (3714975) | 3714975..3715205 | - | 231 | WP_032201148.1 | hypothetical protein | - |
| J6N91_RS17980 (3715183) | 3715183..3715389 | - | 207 | WP_032201146.1 | hypothetical protein | - |
| J6N91_RS17985 (3715346) | 3715346..3715615 | - | 270 | WP_032201145.1 | hypothetical protein | - |
| J6N91_RS17990 (3715623) | 3715623..3715922 | - | 300 | WP_223602140.1 | glycoside hydrolase family 19 protein | - |
| J6N91_RS17995 (3716019) | 3716019..3716480 | - | 462 | Protein_3520 | antitermination protein | - |
| J6N91_RS18000 (3716494) | 3716494..3717483 | - | 990 | WP_115724237.1 | DUF968 domain-containing protein | - |
| J6N91_RS18005 (3717491) | 3717491..3718300 | - | 810 | WP_159188445.1 | KilA-N domain-containing protein | - |
| J6N91_RS18010 (3718320) | 3718320..3718709 | - | 390 | WP_000767114.1 | RusA family crossover junction endodeoxyribonuclease | - |
| J6N91_RS18015 (3718706) | 3718706..3719032 | - | 327 | WP_000210154.1 | LexA family transcriptional regulator | - |
| J6N91_RS18020 (3719029) | 3719029..3719682 | - | 654 | WP_001305610.1 | phage N-6-adenine-methyltransferase | - |
| J6N91_RS18025 (3719682) | 3719682..3720176 | - | 495 | WP_159188446.1 | PerC family transcriptional regulator | - |
| J6N91_RS18030 (3720173) | 3720173..3721114 | - | 942 | WP_000104954.1 | helix-turn-helix domain-containing protein | - |
| J6N91_RS18035 (3721104) | 3721104..3721283 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| J6N91_RS18040 (3721459) | 3721459..3722010 | - | 552 | WP_001752099.1 | protein YmfL | - |
| J6N91_RS18045 (3722033) | 3722033..3722281 | - | 249 | WP_000187185.1 | YdaS family helix-turn-helix protein | - |
| J6N91_RS18050 (3722417) | 3722417..3723103 | + | 687 | WP_000853319.1 | helix-turn-helix transcriptional regulator | - |
| J6N91_RS18055 (3723086) | 3723086..3723976 | - | 891 | WP_000389078.1 | BRCT domain-containing protein | - |
| J6N91_RS18060 (3724179) | 3724179..3724382 | + | 204 | WP_001083098.1 | ClpX C4-type zinc finger protein | - |
| J6N91_RS18065 (3724391) | 3724391..3724666 | + | 276 | WP_116836908.1 | hypothetical protein | - |
| J6N91_RS18070 (3724942) | 3724942..3725252 | + | 311 | Protein_3535 | hypothetical protein | - |
| J6N91_RS18075 (3725267) | 3725267..3725629 | + | 363 | WP_000135682.1 | protein YfdP | - |
| J6N91_RS18080 (3725695) | 3725695..3726519 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| J6N91_RS18085 (3726647) | 3726647..3727183 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| J6N91_RS18090 (3727174) | 3727174..3727536 | + | 363 | WP_001242749.1 | phage protein | - |
| J6N91_RS18095 (3727536) | 3727536..3727841 | + | 306 | WP_000206734.1 | protein YfdT | - |
| J6N91_RS18100 (3727841) | 3727841..3728191 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| J6N91_RS18105 (3728113) | 3728113..3729231 | + | 1119 | WP_001132557.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| J6N91_RS18115 (3729436) | 3729436..3730689 | - | 1254 | WP_000893266.1 | glutamate-5-semialdehyde dehydrogenase | - |
| J6N91_RS18120 (3730701) | 3730701..3731804 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| J6N91_RS18125 (3732092) | 3732092..3733147 | + | 1056 | WP_001408338.1 | phosphoporin PhoE | - |
| J6N91_RS18130 (3733186) | 3733186..3733587 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3734305) | 3734305..3734385 | - | 81 | NuclAT_11 | - | - |
| - (3734305) | 3734305..3734385 | - | 81 | NuclAT_11 | - | - |
| - (3734305) | 3734305..3734385 | - | 81 | NuclAT_11 | - | - |
| - (3734305) | 3734305..3734385 | - | 81 | NuclAT_11 | - | - |
| J6N91_RS18135 (3733645) | 3733645..3734889 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| J6N91_RS18140 (3734981) | 3734981..3735439 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| J6N91_RS18145 (3735700) | 3735700..3737157 | + | 1458 | WP_040091284.1 | cytosol nonspecific dipeptidase | - |
| J6N91_RS18150 (3737214) | 3737214..3737566 | - | 353 | Protein_3550 | peptide chain release factor H | - |
| J6N91_RS18155 (3737562) | 3737562..3737768 | - | 207 | Protein_3551 | RtcB family protein | - |
| J6N91_RS18160 (3738085) | 3738085..3738537 | - | 453 | WP_071780660.1 | GNAT family N-acetyltransferase | - |
| J6N91_RS18165 (3738534) | 3738534..3739589 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| J6N91_RS18170 (3739660) | 3739660..3740445 | - | 786 | WP_000207555.1 | hypothetical protein | VF |
| J6N91_RS18175 (3740417) | 3740417..3742129 | + | 1713 | Protein_3555 | hypothetical protein | VF |
| J6N91_RS18180 (3742447) | 3742447..3742944 | - | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| J6N91_RS18185 (3743120) | 3743120..3743869 | - | 750 | WP_000093940.1 | hypothetical protein | VF |
| J6N91_RS18190 (3744170) | 3744170..3744910 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| J6N91_RS18195 (3744881) | 3744881..3745648 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| J6N91_RS18200 (3745854) | 3745854..3746432 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|