MGE detailed information
MGE type: Genomic_island MGE length: 47651 bp
Accession: NZ_CP081690 Location: 4440874..4488524 Organism: Escherichia coli strain 0H25 Replicon: chromosome
Accession: NZ_CP081690 Location: 4440874..4488524 Organism: Escherichia coli strain 0H25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O25_RS21765 (4436501) | 4436501..4436839 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| J6O25_RS21770 (4436815) | 4436815..4438512 | + | 1698 | WP_000068974.1 | protein-disulfide reductase DsbD | - |
| J6O25_RS21775 (4438549) | 4438549..4439124 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| J6O25_RS21785 (4439504) | 4439504..4440766 | + | 1263 | WP_001218854.1 | integrase arm-type DNA-binding domain-containing protein | - |
| J6O25_RS21795 (4441720) | 4441720..4442241 | + | 522 | Protein_4270 | hypothetical protein ; Integrase | Integrase |
| J6O25_RS21800 (4442311) | 4442311..4442547 | + | 237 | WP_024195749.1 | hypothetical protein | - |
| J6O25_RS21805 (4442563) | 4442563..4442835 | + | 273 | WP_001547725.1 | hypothetical protein | - |
| J6O25_RS21810 (4442866) | 4442866..4443075 | - | 210 | WP_001547726.1 | hypothetical protein | - |
| J6O25_RS21815 (4443172) | 4443172..4444209 | - | 1038 | WP_001547728.1 | major capsid protein | - |
| J6O25_RS21820 (4444234) | 4444234..4444578 | - | 345 | WP_001547729.1 | hypothetical protein | - |
| J6O25_RS21825 (4444742) | 4444742..4445051 | - | 310 | Protein_4276 | integrase core domain-containing protein | - |
| J6O25_RS21830 (4445068) | 4445068..4446144 | - | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| J6O25_RS21835 (4446426) | 4446426..4446605 | - | 180 | Protein_4278 | DDE-type integrase/transposase/recombinase | - |
| J6O25_RS21840 (4446686) | 4446686..4448194 | - | 1509 | WP_032142258.1 | group II intron reverse transcriptase/maturase | - |
| J6O25_RS21845 (4448867) | 4448867..4449576 | - | 710 | Protein_4280 | IS3 family transposase IS3 | Transposase |
| J6O25_RS21850 (4449673) | 4449673..4450200 | + | 528 | WP_223584368.1 | HNH endonuclease | - |
| J6O25_RS27350 (4450544) | 4450544..4450621 | + | 78 | Protein_4282 | hypothetical protein | - |
| J6O25_RS21860 (4450687) | 4450687..4451727 | + | 1041 | WP_223584496.1 | IS66 family transposase ISEc22 | Transposase |
| J6O25_RS21865 (4451770) | 4451770..4452522 | + | 753 | Protein_4284 | IS30 family transposase IS30D | Transposase |
| J6O25_RS21870 (4452535) | 4452535..4452792 | - | 258 | Protein_4285 | IS3 family transposase ISEc52 | Transposase |
| J6O25_RS21875 (4452863) | 4452863..4453107 | + | 245 | Protein_4286 | IS30 family transposase | - |
| J6O25_RS21880 (4453644) | 4453644..4456937 | - | 3294 | WP_223584370.1 | Outer membrane protein IcsA autotransporter | VF |
| J6O25_RS21885 (4457117) | 4457117..4458097 | + | 981 | WP_001547740.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O25_RS21890 (4458280) | 4458280..4459254 | + | 975 | WP_000130706.1 | porphobilinogen synthase | - |
| J6O25_RS21895 (4459382) | 4459382..4461106 | + | 1725 | WP_001547741.1 | lysophospholipid acyltransferase family protein | - |
| J6O25_RS21900 (4461174) | 4461174..4462025 | - | 852 | WP_001547743.1 | taurine dioxygenase | - |
| J6O25_RS21905 (4462022) | 4462022..4462849 | - | 828 | WP_001547744.1 | taurine ABC transporter permease TauC | - |
| J6O25_RS21910 (4462846) | 4462846..4463613 | - | 768 | WP_000932310.1 | Taurine import ATP-binding protein TauB | VF |
| J6O25_RS21915 (4463624) | 4463624..4464586 | - | 963 | WP_001018397.1 | taurine ABC transporter substrate-binding protein | - |
| J6O25_RS21920 (4465260) | 4465260..4466192 | - | 933 | WP_000081354.1 | homocysteine S-methyltransferase | - |
| J6O25_RS21925 (4466179) | 4466179..4467579 | - | 1401 | WP_001194698.1 | S-methylmethionine permease | - |
| J6O25_RS21930 (4467943) | 4467943..4469052 | + | 1110 | WP_001211967.1 | AI-2E family transporter | - |
| J6O25_RS21935 (4469172) | 4469172..4470956 | + | 1785 | WP_001217015.1 | diguanylate cyclase | - |
| J6O25_RS21940 (4470969) | 4470969..4471373 | - | 405 | WP_000334957.1 | Regulatory protein SoxS | VF |
| J6O25_RS21945 (4471497) | 4471497..4472141 | - | 645 | WP_001547746.1 | HTH-type transcriptional regulator AcrR | VF |
| J6O25_RS21955 (4473228) | 4473228..4473464 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O25_RS21960 (4473464) | 4473464..4473907 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| J6O25_RS21965 (4473930) | 4473930..4474397 | + | 468 | WP_001547765.1 | protein YkfB | - |
| J6O25_RS21970 (4474474) | 4474474..4474713 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O25_RS21975 (4474811) | 4474811..4475269 | + | 459 | WP_001548150.1 | antirestriction protein | - |
| J6O25_RS21980 (4475285) | 4475285..4475761 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O25_RS21985 (4475770) | 4475770..4475991 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O25_RS21990 (4476010) | 4476010..4476336 | + | 327 | WP_001548930.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O25_RS21995 (4476426) | 4476426..4476803 | + | 378 | WP_000854726.1 | TA system toxin CbtA family protein | Toxin Detail |
| J6O25_RS22000 (4476800) | 4476800..4477288 | + | 489 | WP_001547769.1 | DUF5983 family protein | - |
| J6O25_RS22005 (4477300) | 4477300..4477497 | + | 198 | WP_000839269.1 | DUF957 domain-containing protein | - |
| J6O25_RS22010 (4477582) | 4477582..4478424 | + | 843 | WP_001547770.1 | DUF4942 domain-containing protein | - |
| J6O25_RS22015 (4479173) | 4479173..4480711 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| J6O25_RS22020 (4481077) | 4481077..4482411 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| J6O25_RS22025 (4482491) | 4482491..4484638 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| J6O25_RS22030 (4484697) | 4484697..4486154 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| J6O25_RS22035 (4486391) | 4486391..4487908 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| J6O25_RS22040 (4488027) | 4488027..4488200 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| J6O25_RS22045 (4488228) | 4488228..4488524 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| J6O25_RS22050 (4488751) | 4488751..4489023 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| J6O25_RS22055 (4489035) | 4489035..4489265 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| J6O25_RS22060 (4489446) | 4489446..4491077 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| J6O25_RS22065 (4491074) | 4491074..4491793 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|