MGE detailed information
MGE type: Genomic_island MGE length: 38363 bp
Accession: NZ_CP081684 Location: 3876174..3914536 Organism: Escherichia coli strain 0H23 Replicon: chromosome
Accession: NZ_CP081684 Location: 3876174..3914536 Organism: Escherichia coli strain 0H23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O16_RS18915 (3871831) | 3871831..3872256 | + | 426 | Protein_3710 | IS3 family transposase | - |
| J6O16_RS18920 (3872929) | 3872929..3874437 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| J6O16_RS18925 (3874518) | 3874518..3874697 | + | 180 | Protein_3712 | DDE-type integrase/transposase/recombinase | - |
| J6O16_RS18930 (3874979) | 3874979..3876055 | + | 1077 | WP_000227969.1 | IS110 family transposase | - |
| J6O16_RS18935 (3876072) | 3876072..3876380 | + | 309 | Protein_3714 | IS3 family transposase ISLad1 | Transposase |
| J6O16_RS18940 (3876278) | 3876278..3877576 | - | 1299 | WP_000342159.1 | IS256 family transposase ISSoEn2 | Transposase |
| J6O16_RS18945 (3877794) | 3877794..3877958 | - | 165 | Protein_3716 | transposase domain-containing protein | - |
| J6O16_RS18950 (3877903) | 3877903..3878166 | - | 264 | WP_001247776.1 | transposase | - |
| J6O16_RS18955 (3878181) | 3878181..3878444 | + | 264 | WP_001549018.1 | hypothetical protein | - |
| J6O16_RS18960 (3878673) | 3878673..3878954 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| J6O16_RS18965 (3878989) | 3878989..3879558 | + | 570 | WP_000350435.1 | Small heat shock protein IbpA | VF |
| J6O16_RS18970 (3879664) | 3879664..3882546 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| J6O16_RS18975 (3882546) | 3882546..3882737 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| J6O16_RS18980 (3882798) | 3882798..3884525 | + | 1728 | WP_000412528.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| J6O16_RS18985 (3884613) | 3884613..3885071 | + | 459 | WP_001275372.1 | hypothetical protein | VF |
| J6O16_RS18990 (3885094) | 3885094..3886008 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| J6O16_RS18995 (3886111) | 3886111..3886998 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| J6O16_RS19000 (3887088) | 3887088..3887699 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| J6O16_RS19005 (3887779) | 3887779..3888924 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| J6O16_RS19010 (3888914) | 3888914..3889354 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| J6O16_RS19015 (3889358) | 3889358..3891073 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| J6O16_RS19020 (3891070) | 3891070..3891567 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| J6O16_RS19025 (3891545) | 3891545..3892510 | + | 966 | WP_000196689.1 | zinc metalloprotease HtpX | - |
| J6O16_RS19030 (3892535) | 3892535..3893686 | + | 1152 | WP_000323729.1 | hypothetical protein | VF |
| J6O16_RS19035 (3893911) | 3893911..3894480 | - | 570 | Protein_3734 | IS5 family transposase ISPa16 | Transposase |
| J6O16_RS19040 (3895602) | 3895602..3896465 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| J6O16_RS19045 (3896557) | 3896557..3897378 | + | 822 | WP_000197388.1 | DUF932 domain-containing protein | - |
| J6O16_RS19050 (3897595) | 3897595..3898302 | + | 708 | WP_223598055.1 | WYL domain-containing protein | - |
| J6O16_RS19055 (3898338) | 3898338..3898583 | + | 246 | WP_223598057.1 | protein YpjK | - |
| J6O16_RS19060 (3898573) | 3898573..3899016 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| J6O16_RS19065 (3899039) | 3899039..3899506 | + | 468 | WP_001547765.1 | protein YkfB | - |
| J6O16_RS19070 (3899583) | 3899583..3899822 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O16_RS19075 (3899920) | 3899920..3900378 | + | 459 | WP_001548150.1 | antirestriction protein | - |
| J6O16_RS19080 (3900394) | 3900394..3900870 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O16_RS19085 (3900879) | 3900879..3901100 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O16_RS19090 (3901119) | 3901119..3901436 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O16_RS19095 (3901457) | 3901457..3901798 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O16_RS19100 (3902619) | 3902619..3904085 | - | 1467 | WP_000723924.1 | hypothetical protein | - |
| J6O16_RS19105 (3904401) | 3904401..3904820 | - | 420 | WP_001333214.1 | hypothetical protein | - |
| J6O16_RS19110 (3905034) | 3905034..3905120 | - | 87 | Protein_3749 | capsid protein | - |
| J6O16_RS19115 (3905325) | 3905325..3906098 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| J6O16_RS19120 (3906159) | 3906159..3906713 | - | 555 | WP_000905043.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O16_RS19125 (3906740) | 3906740..3907114 | + | 375 | WP_001372123.1 | hypothetical protein | - |
| J6O16_RS19130 (3907114) | 3907114..3907557 | + | 444 | WP_000978831.1 | tail fiber assembly protein | - |
| J6O16_RS19135 (3907529) | 3907529..3908122 | - | 594 | WP_000613358.1 | tail fiber assembly protein | - |
| J6O16_RS19140 (3908122) | 3908122..3908943 | - | 822 | WP_000554686.1 | hypothetical protein | - |
| J6O16_RS19145 (3908947) | 3908947..3909531 | - | 585 | WP_016243480.1 | YmfQ family protein | - |
| J6O16_RS19150 (3909522) | 3909522..3910580 | - | 1059 | WP_016243479.1 | baseplate J/gp47 family protein | - |
| J6O16_RS19155 (3910567) | 3910567..3910992 | - | 426 | WP_042027905.1 | phage GP46 family protein | - |
| J6O16_RS19160 (3910992) | 3910992..3911540 | - | 549 | WP_001542670.1 | phage baseplate assembly protein V | - |
| J6O16_RS19165 (3911540) | 3911540..3912619 | - | 1080 | WP_016243477.1 | phage tail protein | - |
| J6O16_RS19170 (3912616) | 3912616..3913944 | - | 1329 | WP_016243476.1 | DNA circularization N-terminal domain-containing protein | - |
| J6O16_RS19175 (3914006) | 3914006..3914536 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| J6O16_RS19180 (3914628) | 3914628..3916460 | - | 1833 | WP_016243475.1 | phage tail tape measure protein | - |
| J6O16_RS19185 (3916602) | 3916602..3916871 | - | 270 | WP_000661051.1 | phage tail assembly protein | - |
| J6O16_RS19190 (3916871) | 3916871..3917227 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| J6O16_RS19195 (3917227) | 3917227..3918723 | - | 1497 | WP_001759749.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| J6O16_RS19200 (3918707) | 3918707..3918877 | - | 171 | WP_016243474.1 | DUF2635 domain-containing protein | - |
| J6O16_RS19205 (3918886) | 3918886..3919446 | - | 561 | WP_016243473.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|