MGE detailed information
MGE type: Genomic_island MGE length: 11598 bp
Accession: NZ_CP080400 Location: 2320238..2331835 Organism: Dickeya fangzhongdai strain Onc5 Replicon: chromosome
Accession: NZ_CP080400 Location: 2320238..2331835 Organism: Dickeya fangzhongdai strain Onc5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K0H75_RS10185 (K0H75_10160) | 2317265..2317495 | - | 231 | WP_038658972.1 | DNA polymerase III subunit theta | - |
| K0H75_RS10190 (K0H75_10165) | 2317656..2318036 | + | 381 | WP_082170933.1 | copper homeostasis periplasmic binding protein CopC | - |
| K0H75_RS10195 (K0H75_10170) | 2318040..2318948 | + | 909 | WP_038918964.1 | copper homeostasis membrane protein CopD | - |
| K0H75_RS10200 (K0H75_10175) | 2319231..2319740 | + | 510 | WP_038658962.1 | non-heme ferritin | - |
| K0H75_RS10205 (K0H75_10180) | 2320238..2320939 | + | 702 | WP_038918966.1 | DNA/RNA non-specific endonuclease | - |
| K0H75_RS10210 (K0H75_10185) | 2321434..2322573 | - | 1140 | WP_038918967.1 | hypothetical protein | VF |
| K0H75_RS10215 (K0H75_10190) | 2322566..2323663 | - | 1098 | WP_038918968.1 | HDOD domain-containing protein | - |
| K0H75_RS10220 (K0H75_10195) | 2323654..2324769 | - | 1116 | WP_038920959.1 | ATP-binding protein | - |
| K0H75_RS10225 (K0H75_10200) | 2324762..2325886 | - | 1125 | WP_038918970.1 | FIST N-terminal domain-containing protein | - |
| K0H75_RS10230 (K0H75_10205) | 2326147..2327520 | - | 1374 | WP_049842555.1 | pectate lyase | - |
| K0H75_RS10235 (K0H75_10210) | 2327897..2328646 | - | 750 | WP_127353491.1 | hypothetical protein | - |
| K0H75_RS10240 (K0H75_10215) | 2328984..2329391 | + | 408 | WP_038918971.1 | hypothetical protein | - |
| - | 2329696..2329778 | + | 83 | - | - | Antitoxin Detail |
| - | 2329698..2329778 | - | 81 | - | - | Toxin Detail |
| K0H75_RS10245 (K0H75_10220) | 2329948..2330286 | - | 339 | WP_038918972.1 | YebY family protein | - |
| K0H75_RS10250 (K0H75_10225) | 2330827..2331243 | + | 417 | WP_231348874.1 | hypothetical protein | - |
| K0H75_RS10255 (K0H75_10230) | 2331587..2331835 | + | 249 | WP_038918974.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| K0H75_RS10260 (K0H75_10235) | 2331950..2333692 | - | 1743 | WP_038918975.1 | ABC transporter permease subunit | - |
| K0H75_RS10265 (K0H75_10240) | 2333689..2335203 | - | 1515 | WP_123130534.1 | ABC transporter substrate-binding protein | - |
| K0H75_RS10270 (K0H75_10245) | 2335230..2336045 | - | 816 | WP_038918977.1 | dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|