MGE detailed information
MGE type: Prophage MGE length: 27234 bp
Accession: NZ_CP080370 Location: 2819246..2846479 Organism: Escherichia coli strain PK5086 Replicon: chromosome
Accession: NZ_CP080370 Location: 2819246..2846479 Organism: Escherichia coli strain PK5086 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K0H55_RS13675 (2816805) | 2816805..2817677 | - | 873 | WP_032179701.1 | GTPase family protein | - |
| K0H55_RS13680 (2818045) | 2818045..2818740 | - | 696 | WP_032180028.1 | hypothetical protein | - |
| K0H55_RS13685 (2818743) | 2818743..2819249 | - | 507 | WP_032180027.1 | hypothetical protein | - |
| K0H55_RS13690 (2819246) | 2819246..2820076 | - | 831 | WP_001399639.1 | Sialic acid TRAP transporter large permease protein SiaM | VF |
| K0H55_RS13695 (2821398) | 2821398..2821637 | + | 240 | WP_024224214.1 | hypothetical protein | - |
| K0H55_RS13700 (2821677) | 2821677..2824115 | + | 2439 | WP_032180025.1 | type I restriction-modification system subunit M | - |
| K0H55_RS13705 (2824115) | 2824115..2825470 | + | 1356 | WP_223349791.1 | restriction endonuclease subunit S | - |
| K0H55_RS13710 (2825483) | 2825483..2826139 | + | 657 | WP_000312833.1 | toxin-antitoxin system toxin DNA ADP-ribosyl transferase DarT | Toxin Detail |
| K0H55_RS13715 (2826136) | 2826136..2827203 | + | 1068 | WP_000634203.1 | toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG | Antitoxin Detail |
| K0H55_RS13720 (2827222) | 2827222..2830317 | + | 3096 | WP_000108736.1 | HsdR family type I site-specific deoxyribonuclease | - |
| K0H55_RS13725 (2830317) | 2830317..2831033 | + | 717 | WP_001122107.1 | SprT family zinc-dependent metalloprotease | - |
| K0H55_RS13730 (2831378) | 2831378..2831992 | + | 615 | Protein_2698 | IS3 family transposase ISSd1 | Transposase |
| K0H55_RS13735 (2832236) | 2832236..2833534 | - | 1299 | WP_000262203.1 | anaerobic C4-dicarboxylate transporter | - |
| K0H55_RS13740 (2833600) | 2833600..2834319 | - | 720 | WP_000677245.1 | amino acid racemase | - |
| K0H55_RS13745 (2834670) | 2834670..2835608 | + | 939 | WP_000789104.1 | Oligopeptide transport ATP-binding protein OppD | VF |
| K0H55_RS13750 (2835726) | 2835726..2836184 | - | 459 | WP_021513032.1 | IS200-IS605 family transposase IS200C | Transposase |
| K0H55_RS13755 (2836264) | 2836264..2836755 | + | 492 | Protein_2703 | Dipeptide transport system permease protein DppB | VF |
| K0H55_RS13760 (2836913) | 2836913..2838058 | - | 1146 | WP_000976514.1 | putative D,D-dipeptide-binding periplasmic protein DdpA | ARG |
| K0H55_RS13765 (2838382) | 2838382..2839644 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| K0H55_RS13770 (2839910) | 2839910..2841256 | - | 1347 | WP_000483766.1 | IS4 family transposase IS4 | Transposase |
| K0H55_RS24495 (2841735) | 2841735..2841890 | - | 156 | Protein_2707 | tellurite resistance protein | - |
| K0H55_RS13780 (2842032) | 2842032..2842814 | - | 783 | WP_072129716.1 | IS21 family transposase IS100kyp | Transposase |
| K0H55_RS13785 (2842811) | 2842811..2843833 | - | 1023 | Protein_2709 | IS21 family transposase IS100kyp | Transposase |
| K0H55_RS24500 (2844196) | 2844196..2844453 | - | 258 | Protein_2710 | replication endonuclease | - |
| K0H55_RS13790 (2844544) | 2844544..2846082 | - | 1539 | WP_122950705.1 | IS66 family transposase ISEc8 | Transposase |
| K0H55_RS13795 (2846132) | 2846132..2846479 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| K0H55_RS13800 (2846476) | 2846476..2846856 | - | 381 | WP_021566758.1 | transposase | - |
| K0H55_RS13805 (2847069) | 2847069..2847179 | + | 111 | Protein_2714 | transposase domain-containing protein | - |
| K0H55_RS13810 (2847311) | 2847311..2848324 | - | 1014 | WP_000107485.1 | aldose 1-epimerase family protein | - |
| K0H55_RS13815 (2848336) | 2848336..2849652 | - | 1317 | WP_000998346.1 | L-fucose:H+ symporter permease | - |
| K0H55_RS13820 (2849680) | 2849680..2850600 | - | 921 | WP_000350265.1 | ribokinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|