MGE detailed information
MGE type: Prophage MGE length: 72647 bp
Accession: NZ_CP080223 Location: 2042337..2114983 Organism: Escherichia coli O141:H4 strain P13-6 Replicon: chromosome
Accession: NZ_CP080223 Location: 2042337..2114983 Organism: Escherichia coli O141:H4 strain P13-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW89_RS09970 () | 2039385..2040356 | - | 972 | WP_000564725.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| KZW89_RS09975 () | 2040353..2041096 | - | 744 | WP_000019590.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| KZW89_RS09980 () | 2041137..2041532 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| KZW89_RS09985 () | 2041585..2042355 | - | 771 | WP_044151905.1 | DUF72 domain-containing protein | - |
| KZW89_RS09990 () | 2042337..2043650 | - | 1314 | WP_000361999.1 | hypothetical protein ; Integrase | Integrase |
| KZW89_RS09995 () | 2043706..2043942 | - | 237 | WP_000528717.1 | excisionase family protein | - |
| KZW89_RS10000 () | 2043951..2044097 | - | 147 | WP_001030139.1 | hypothetical protein | - |
| KZW89_RS10005 () | 2044101..2044343 | - | 243 | WP_096850885.1 | DUF4222 domain-containing protein | - |
| KZW89_RS10010 () | 2044375..2044746 | - | 372 | WP_032082693.1 | DUF5406 family protein | - |
| KZW89_RS10015 () | 2044787..2045614 | - | 828 | WP_021558721.1 | SPFH domain-containing protein | - |
| KZW89_RS28785 () | 2045611..2045799 | - | 189 | WP_001242070.1 | hypothetical protein | - |
| KZW89_RS10020 () | 2045976..2046557 | - | 582 | WP_021558722.1 | hypothetical protein | - |
| KZW89_RS10025 () | 2046554..2046742 | - | 189 | WP_000391589.1 | hypothetical protein | - |
| KZW89_RS10030 () | 2046939..2047145 | - | 207 | WP_000141090.1 | hypothetical protein | - |
| KZW89_RS10035 () | 2047301..2047762 | - | 462 | WP_021558724.1 | helix-turn-helix transcriptional regulator | - |
| KZW89_RS10040 () | 2047908..2048597 | - | 690 | WP_000800136.1 | LexA family transcriptional regulator | - |
| KZW89_RS10045 () | 2048731..2049030 | + | 300 | WP_064732963.1 | YdaS family helix-turn-helix protein | - |
| KZW89_RS10050 () | 2049107..2049961 | + | 855 | WP_096850886.1 | ORF6N domain-containing protein | - |
| KZW89_RS10055 () | 2049958..2050170 | + | 213 | WP_000983808.1 | Lar family restriction alleviation protein | - |
| KZW89_RS10060 () | 2050188..2050850 | + | 663 | WP_047085107.1 | ash family protein | - |
| KZW89_RS10065 () | 2050843..2051076 | + | 234 | WP_021558728.1 | hypothetical protein | - |
| KZW89_RS10070 () | 2051110..2052135 | + | 1026 | Protein_1973 | DnaB helicase C-terminal domain-containing protein | - |
| KZW89_RS10075 () | 2052132..2052389 | + | 258 | WP_001064805.1 | hypothetical protein | - |
| KZW89_RS10080 () | 2052389..2052769 | + | 381 | WP_015967628.1 | antiterminator Q family protein | - |
| KZW89_RS28790 () | 2052864..2053220 | + | 357 | WP_236496043.1 | hypothetical protein | - |
| KZW89_RS10085 () | 2053207..2054094 | + | 888 | Protein_1977 | GIY-YIG nuclease family protein | - |
| KZW89_RS10090 () | 2054311..2054508 | + | 198 | WP_001373022.1 | hypothetical protein | - |
| KZW89_RS10095 () | 2054659..2055705 | + | 1047 | WP_000024316.1 | site-specific DNA-methyltransferase | - |
| KZW89_RS10110 () | 2056599..2057024 | + | 426 | WP_000466934.1 | tellurite/colicin resistance protein | - |
| KZW89_RS10115 () | 2057021..2057173 | + | 153 | WP_000833644.1 | DUF3927 family protein | - |
| KZW89_RS10120 () | 2057261..2057653 | + | 393 | WP_001294582.1 | putative holin | - |
| KZW89_RS10125 () | 2057643..2057918 | + | 276 | WP_000950581.1 | phage holin family protein | - |
| KZW89_RS10130 () | 2057921..2058298 | + | 378 | WP_000014557.1 | M15 family metallopeptidase | - |
| KZW89_RS28795 () | 2058325..2058450 | + | 126 | WP_001372763.1 | hypothetical protein | - |
| KZW89_RS10140 () | 2058431..2058700 | - | 270 | WP_000159741.1 | hypothetical protein | - |
| KZW89_RS28800 () | 2058736..2058864 | + | 129 | WP_000093649.1 | hypothetical protein | - |
| KZW89_RS10145 () | 2059025..2059321 | + | 297 | WP_120150403.1 | hypothetical protein | - |
| KZW89_RS10150 () | 2059342..2059692 | + | 351 | WP_120150401.1 | HNH endonuclease signature motif containing protein | - |
| KZW89_RS10155 () | 2059839..2060321 | + | 483 | WP_024262801.1 | phage terminase small subunit P27 family | - |
| KZW89_RS10160 () | 2060321..2062078 | + | 1758 | WP_001140894.1 | terminase large subunit | - |
| KZW89_RS10165 () | 2062090..2062272 | + | 183 | WP_000478597.1 | hypothetical protein | - |
| KZW89_RS10170 () | 2062272..2063513 | + | 1242 | WP_000466013.1 | phage portal protein | - |
| KZW89_RS10175 () | 2063491..2063817 | + | 327 | Protein_1994 | HK97 family phage prohead protease | - |
| KZW89_RS10180 () | 2063817..2064032 | + | 216 | Protein_1995 | phage major capsid protein | - |
| KZW89_RS10185 () | 2064078..2064401 | + | 324 | WP_000924705.1 | head-tail connector protein | - |
| KZW89_RS10190 () | 2064398..2064814 | + | 417 | WP_000702448.1 | phage head closure protein | - |
| KZW89_RS10195 () | 2064780..2065304 | + | 525 | WP_053272705.1 | hypothetical protein | - |
| KZW89_RS10200 () | 2065301..2065864 | + | 564 | WP_064226643.1 | hypothetical protein | - |
| KZW89_RS10205 () | 2065874..2066035 | + | 162 | WP_047085173.1 | DUF2635 domain-containing protein | - |
| KZW89_RS10210 () | 2066032..2067528 | + | 1497 | WP_064226644.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| KZW89_RS10215 () | 2067528..2067884 | + | 357 | WP_001062340.1 | phage tail tube protein | - |
| KZW89_RS10220 () | 2067884..2068219 | + | 336 | WP_074398224.1 | phage tail assembly protein | - |
| KZW89_RS10225 () | 2068304..2068468 | + | 165 | Protein_2004 | hypothetical protein | - |
| KZW89_RS10230 () | 2068525..2069835 | + | 1311 | WP_219789411.1 | tail fiber protein | - |
| KZW89_RS10235 () | 2069835..2070398 | + | 564 | WP_120150339.1 | DUF4376 domain-containing protein | - |
| KZW89_RS28805 () | 2070719..2070814 | - | 96 | Protein_2007 | hypothetical protein | - |
| KZW89_RS10240 () | 2070811..2071377 | - | 567 | WP_000891621.1 | hydrolase | - |
| KZW89_RS10245 () | 2071687..2073459 | + | 1773 | WP_001258678.1 | aspartate--tRNA ligase | - |
| KZW89_RS10250 () | 2073577..2074029 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| KZW89_RS10255 () | 2074058..2074798 | + | 741 | WP_000907248.1 | hypothetical protein | VF |
| KZW89_RS10260 () | 2074833..2075354 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| KZW89_RS10265 () | 2075356..2075958 | - | 603 | WP_001024932.1 | YebB family permuted papain-like enzyme | - |
| KZW89_RS10270 () | 2076029..2076094 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| KZW89_RS10275 () | 2076233..2076844 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| KZW89_RS10280 () | 2076853..2077863 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| KZW89_RS10285 () | 2078010..2078795 | - | 786 | WP_000571480.1 | hypothetical protein | VF |
| KZW89_RS10290 () | 2078792..2079547 | - | 756 | WP_000203010.1 | hypothetical protein | VF |
| KZW89_RS10295 () | 2079626..2080558 | + | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| KZW89_RS10300 () | 2080574..2081896 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| KZW89_RS10305 () | 2082016..2082987 | + | 972 | WP_000448381.1 | hypothetical protein | VF |
| KZW89_RS10310 () | 2083118..2084560 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| KZW89_RS10315 () | 2084688..2085557 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| KZW89_RS10320 () | 2085895..2087370 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| KZW89_RS10325 () | 2087605..2089416 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| KZW89_RS10330 () | 2089453..2090094 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| KZW89_RS10335 () | 2090150..2091328 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| KZW89_RS10340 () | 2091462..2091752 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| KZW89_RS10345 () | 2091819..2092175 | + | 357 | WP_001295500.1 | protein YebF | - |
| KZW89_RS10350 () | 2092502..2093161 | + | 660 | WP_000024757.1 | tellurite resistance TerB family protein | - |
| KZW89_RS10355 () | 2093370..2095430 | + | 2061 | WP_000936927.1 | oligopeptidase B | - |
| KZW89_RS10360 () | 2095427..2096089 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| KZW89_RS10365 () | 2096113..2096769 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| KZW89_RS10370 () | 2096871..2097101 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| KZW89_RS10375 () | 2097240..2097614 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| KZW89_RS10380 () | 2097618..2098490 | + | 873 | WP_000879289.1 | copper homeostasis membrane protein CopD | - |
| KZW89_RS10385 () | 2098503..2098844 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 2098872..2099143 | - | 272 | - | - | Antitoxin Detail |
| - | 2099002..2099105 | + | 104 | - | - | Toxin Detail |
| KZW89_RS10390 () | 2099240..2099896 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| KZW89_RS10395 () | 2099897..2100088 | - | 192 | WP_000457842.1 | YebW family protein | - |
| KZW89_RS10400 () | 2100193..2100429 | - | 237 | WP_001295499.1 | YebV family protein | - |
| KZW89_RS10405 () | 2100547..2101986 | - | 1440 | WP_001352260.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| KZW89_RS10410 () | 2102066..2104699 | - | 2634 | WP_001397958.1 | hypothetical protein | VF |
| KZW89_RS10415 () | 2104668..2105951 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| KZW89_RS10420 () | 2106081..2106578 | + | 498 | WP_001043877.1 | L-methionine (R)-S-oxide reductase | - |
| KZW89_RS10425 () | 2106675..2107373 | + | 699 | WP_000431381.1 | RNA chaperone ProQ | - |
| KZW89_RS10430 () | 2107393..2109441 | + | 2049 | WP_001055791.1 | carboxy terminal-processing peptidase | - |
| KZW89_RS10435 () | 2109633..2110514 | + | 882 | WP_000984520.1 | protease HtpX | - |
| KZW89_RS10440 () | 2110560..2111933 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| KZW89_RS10445 () | 2112110..2112901 | + | 792 | WP_001262203.1 | DNA-binding transcriptional regulator KdgR | - |
| KZW89_RS10450 () | 2113045..2113284 | - | 240 | WP_001211011.1 | YobH family protein | - |
| KZW89_RS10455 () | 2113443..2113586 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| KZW89_RS10460 () | 2113661..2113948 | + | 288 | WP_001006866.1 | YebO family protein | - |
| KZW89_RS10465 () | 2114618..2114761 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| KZW89_RS10470 () | 2114774..2114983 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| KZW89_RS10475 () | 2115149..2115958 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| KZW89_RS10480 () | 2115955..2116521 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| KZW89_RS10485 () | 2116950..2117408 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| KZW89_RS10490 () | 2117463..2118314 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| KZW89_RS10495 () | 2118327..2119127 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|