MGE detailed information
MGE type: Genomic_island MGE length: 25499 bp
Accession: NZ_CP080056 Location: 4315985..4341483 Organism: Escherichia coli strain 18SZHZ655Rt Replicon: chromosome
Accession: NZ_CP080056 Location: 4315985..4341483 Organism: Escherichia coli strain 18SZHZ655Rt Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZO13_RS20620 (4312655) | 4312655..4314112 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| KZO13_RS20625 (4314349) | 4314349..4315866 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| KZO13_RS20630 (4315985) | 4315985..4316158 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| KZO13_RS20635 (4316186) | 4316186..4316482 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| KZO13_RS20640 (4316709) | 4316709..4316981 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| KZO13_RS20645 (4317194) | 4317194..4321123 | - | 3930 | WP_024172618.1 | hypothetical protein | VF |
| KZO13_RS20650 (4321940) | 4321940..4322384 | + | 445 | Protein_4047 | LysR substrate-binding domain-containing protein | - |
| KZO13_RS20655 (4322636) | 4322636..4323436 | - | 801 | WP_249768444.1 | AraC family transcriptional regulator | - |
| KZO13_RS20660 (4324359) | 4324359..4328204 | - | 3846 | WP_024172617.1 | hypothetical protein | VF |
| KZO13_RS20665 (4328556) | 4328556..4329083 | + | 528 | WP_001402790.1 | hypothetical protein | VF |
| KZO13_RS20670 (4329148) | 4329148..4329465 | + | 318 | WP_249768446.1 | hypothetical protein | VF |
| KZO13_RS20675 (4329569) | 4329569..4330777 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| KZO13_RS20680 (4330774) | 4330774..4332843 | + | 2070 | WP_249768448.1 | hypothetical protein | VF |
| KZO13_RS20685 (4332836) | 4332836..4333537 | + | 702 | WP_024170839.1 | hypothetical protein | VF |
| KZO13_RS20690 (4333557) | 4333557..4334555 | + | 999 | WP_001402787.1 | hypothetical protein | - |
| KZO13_RS20695 (4334650) | 4334650..4335090 | + | 441 | WP_001402786.1 | fimbrial protein | - |
| KZO13_RS20700 (4335083) | 4335083..4335601 | + | 519 | WP_003582778.1 | fimbrial family protein | - |
| KZO13_RS20705 (4335680) | 4335680..4336410 | + | 731 | Protein_4058 | IS3 family transposase ISKpn1 | Transposase |
| KZO13_RS20710 (4336540) | 4336540..4338603 | - | 2064 | WP_229975247.1 | peptidase domain-containing ABC transporter | - |
| KZO13_RS20715 (4338695) | 4338695..4339915 | - | 1221 | WP_001402780.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| KZO13_RS20720 (4339954) | 4339954..4340526 | - | 573 | WP_000661408.1 | hypothetical protein | - |
| KZO13_RS20725 (4340929) | 4340929..4341680 | + | 752 | Protein_4062 | IS3 family transposase | - |
| KZO13_RS20730 (4341809) | 4341809..4343440 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| KZO13_RS20735 (4343437) | 4343437..4344156 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| KZO13_RS20740 (4344727) | 4344727..4346067 | + | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|