MGE detailed information
MGE type: Genomic_island MGE length: 22546 bp
Accession: NZ_CP079770 Location: 4038170..4060715 Organism: Escherichia coli strain HL15 Replicon: chromosome
Accession: NZ_CP079770 Location: 4038170..4060715 Organism: Escherichia coli strain HL15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYX58_RS21375 (4033620) | 4033620..4034480 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| KYX58_RS21380 (4034523) | 4034523..4035614 | - | 1092 | WP_259553579.1 | fimbrial protein | - |
| KYX58_RS21385 (4035625) | 4035625..4038141 | - | 2517 | WP_259553581.1 | fimbria/pilus outer membrane usher protein | - |
| KYX58_RS21390 (4038170) | 4038170..4038865 | - | 696 | WP_000044775.1 | putative fimbrial chaperone YraI | VF |
| KYX58_RS21395 (4038945) | 4038945..4039529 | - | 585 | WP_001045432.1 | fimbrial protein | - |
| KYX58_RS21400 (4039930) | 4039930..4040685 | - | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| KYX58_RS21405 (4040686) | 4040686..4041477 | - | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| KYX58_RS21410 (4041467) | 4041467..4042270 | - | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| KYX58_RS21415 (4042309) | 4042309..4042785 | - | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| KYX58_RS21420 (4042952) | 4042952..4043812 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| KYX58_RS21425 (4043825) | 4043825..4044979 | - | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| KYX58_RS21430 (4045330) | 4045330..4045887 | - | 558 | Protein_3898 | amidohydrolase family protein | - |
| KYX58_RS21435 (4045883) | 4045883..4046254 | - | 372 | Protein_3899 | PTS sugar transporter subunit IIC | - |
| KYX58_RS21440 (4046265) | 4046265..4046738 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| KYX58_RS21445 (4046761) | 4046761..4048041 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| KYX58_RS21450 (4048290) | 4048290..4049099 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| KYX58_RS21455 (4049154) | 4049154..4049618 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| KYX58_RS21460 (4049618) | 4049618..4049953 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| KYX58_RS21465 (4050102) | 4050102..4051673 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| KYX58_RS21470 (4052048) | 4052048..4053382 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| KYX58_RS21475 (4053398) | 4053398..4054168 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| KYX58_RS21480 (4054198) | 4054198..4055088 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| KYX58_RS21485 (4055185) | 4055185..4056330 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| KYX58_RS21495 (4057240) | 4057240..4058427 | - | 1188 | WP_259553586.1 | YhaC family protein | - |
| KYX58_RS21500 (4058449) | 4058449..4058988 | - | 540 | WP_000675733.1 | protein YhaB | - |
| KYX58_RS21505 (4059244) | 4059244..4059462 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| KYX58_RS21510 (4059777) | 4059777..4060715 | + | 939 | WP_259553588.1 | transcriptional regulator TdcA | - |
| KYX58_RS21515 (4060814) | 4060814..4061803 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| KYX58_RS21520 (4061825) | 4061825..4063156 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| KYX58_RS21525 (4063182) | 4063182..4064390 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|