MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 86876 bp
Accession: NZ_CP076517 Location: 1189365..1276240 Organism: Streptococcus suis strain 39565 Replicon: chromosome
Accession: NZ_CP076517 Location: 1189365..1276240 Organism: Streptococcus suis strain 39565 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KPA27_RS05975 (KPA27_05975) | 1184822..1185370 | + | 549 | WP_044673431.1 | phosphopantothenoylcysteine decarboxylase | - |
| KPA27_RS05980 (KPA27_05980) | 1185357..1185926 | + | 570 | WP_015646942.1 | ECF transporter S component | - |
| KPA27_RS05985 (KPA27_05985) | 1186017..1187735 | + | 1719 | WP_024389902.1 | phospho-sugar mutase | - |
| KPA27_RS05990 (KPA27_05990) | 1187973..1188428 | - | 456 | WP_029749749.1 | GNAT family N-acetyltransferase | - |
| KPA27_RS05995 (KPA27_05995) | 1188442..1188867 | - | 426 | WP_024400879.1 | GNAT family N-acetyltransferase | - |
| KPA27_RS06000 (KPA27_06000) | 1189365..1191119 | - | 1755 | WP_044673435.1 | hypothetical protein ; Integrase | Integrase |
| KPA27_RS06005 (KPA27_06005) | 1191624..1192028 | - | 405 | WP_000878635.1 | sigma-70 family RNA polymerase sigma factor | - |
| KPA27_RS06010 (KPA27_06010) | 1192296..1193012 | - | 717 | WP_001226539.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| KPA27_RS06015 (KPA27_06015) | 1193014..1194291 | - | 1278 | WP_000344171.1 | lanthionine synthetase C family protein | - |
| KPA27_RS06020 (KPA27_06020) | 1194284..1196080 | - | 1797 | WP_031912841.1 | ABC transporter ATP-binding protein | - |
| KPA27_RS06025 (KPA27_06025) | 1196073..1199048 | - | 2976 | WP_014636302.1 | lantibiotic dehydratase | - |
| KPA27_RS06030 (KPA27_06030) | 1199289..1199456 | - | 168 | WP_001058290.1 | gallidermin/nisin family lantibiotic | - |
| KPA27_RS06035 (KPA27_06035) | 1199804..1200490 | - | 687 | WP_001033677.1 | hypothetical protein | - |
| KPA27_RS06040 (KPA27_06040) | 1200468..1201205 | - | 738 | WP_000181737.1 | lantibiotic ABC transporter permease | - |
| KPA27_RS06045 (KPA27_06045) | 1201198..1201899 | - | 702 | WP_000452012.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| KPA27_RS06050 (KPA27_06050) | 1202089..1203432 | - | 1344 | WP_000977993.1 | HAMP domain-containing sensor histidine kinase | - |
| KPA27_RS06055 (KPA27_06055) | 1203410..1204108 | - | 699 | WP_000276750.1 | Sensory transduction protein regX3 | VF |
| KPA27_RS06060 (KPA27_06060) | 1204149..1205522 | - | 1374 | Protein_1151 | S8 family serine peptidase | - |
| KPA27_RS06070 (KPA27_06070) | 1205619..1207502 | - | 1884 | WP_014636299.1 | SAG1250 family conjugative relaxase | - |
| KPA27_RS06075 (KPA27_06075) | 1207489..1207854 | - | 366 | WP_000431640.1 | MobC family plasmid mobilization relaxosome protein | - |
| KPA27_RS06080 (KPA27_06080) | 1207857..1208219 | - | 363 | WP_000140674.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| KPA27_RS06085 (KPA27_06085) | 1208557..1211100 | - | 2544 | WP_000601012.1 | AAA family ATPase | - |
| KPA27_RS06090 (KPA27_06090) | 1211101..1211868 | - | 768 | WP_001235242.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| KPA27_RS06095 (KPA27_06095) | 1211868..1212344 | - | 477 | WP_000578719.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| KPA27_RS06100 (KPA27_06100) | 1212414..1212704 | - | 291 | WP_000667951.1 | hypothetical protein | - |
| KPA27_RS06105 (KPA27_06105) | 1212754..1213143 | - | 390 | WP_044475264.1 | DUF5945 family protein | - |
| KPA27_RS06110 (KPA27_06110) | 1213140..1213367 | - | 228 | WP_000110922.1 | DUF5965 family protein | - |
| KPA27_RS06115 (KPA27_06115) | 1213395..1214495 | - | 1101 | WP_014636297.1 | toprim domain-containing protein | - |
| KPA27_RS06120 (KPA27_06120) | 1214535..1215173 | - | 639 | WP_014636296.1 | hypothetical protein | - |
| KPA27_RS06125 (KPA27_06125) | 1215268..1215558 | - | 291 | WP_000893083.1 | DUF5966 family protein | - |
| KPA27_RS06130 (KPA27_06130) | 1215572..1215871 | - | 300 | WP_014636295.1 | DUF5962 family protein | - |
| KPA27_RS06135 (KPA27_06135) | 1215942..1216901 | - | 960 | Protein_1165 | hypothetical protein | - |
| KPA27_RS06140 (KPA27_06140) | 1216868..1218751 | - | 1884 | WP_043028856.1 | IS607 family transposase ISTsi1 | Transposase |
| KPA27_RS06145 (KPA27_06145) | 1218805..1218996 | - | 192 | WP_000503424.1 | hypothetical protein | - |
| KPA27_RS06150 (KPA27_06150) | 1219067..1219297 | - | 231 | WP_000659121.1 | PC4/YdbC family ssDNA-binding protein | - |
| KPA27_RS06155 (KPA27_06155) | 1219374..1220228 | - | 855 | WP_000743701.1 | ParB/RepB/Spo0J family partition protein | - |
| KPA27_RS06160 (KPA27_06160) | 1220236..1221201 | - | 966 | WP_001145977.1 | MobV family relaxase | - |
| KPA27_RS06165 (KPA27_06165) | 1221727..1222751 | - | 1025 | Protein_1171 | helicase RepA family protein | - |
| KPA27_RS06170 (KPA27_06170) | 1222905..1223378 | - | 474 | WP_000331637.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| KPA27_RS06175 (KPA27_06175) | 1223462..1223887 | - | 426 | WP_000323895.1 | sigma-70 family RNA polymerase sigma factor | - |
| KPA27_RS06180 (KPA27_06180) | 1223982..1224494 | - | 513 | WP_202847668.1 | sigma-70 family RNA polymerase sigma factor | - |
| KPA27_RS06185 (KPA27_06185) | 1224982..1225152 | - | 171 | WP_004614788.1 | cysteine-rich KTR domain-containing protein | - |
| KPA27_RS06190 (KPA27_06190) | 1225207..1227126 | - | 1920 | WP_216330727.1 | Tetracycline resistance protein TetO | VF |
| KPA27_RS06195 (KPA27_06195) | 1227493..1227867 | - | 375 | WP_001140406.1 | TnpV protein | - |
| KPA27_RS06200 (KPA27_06200) | 1228043..1229299 | + | 1257 | WP_202847666.1 | ISL3 family transposase ISSsu6 | Transposase |
| KPA27_RS06205 (KPA27_06205) | 1229308..1229592 | - | 285 | Protein_1179 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| KPA27_RS06210 (KPA27_06210) | 1229762..1230499 | - | 738 | WP_001038796.1 | rRNA adenine N-6-methyltransferase | ARG |
| KPA27_RS06215 (KPA27_06215) | 1230624..1230707 | - | 84 | WP_099868591.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| KPA27_RS06220 (KPA27_06220) | 1231131..1234526 | - | 3396 | Protein_1182 | N-6 DNA methylase | - |
| KPA27_RS06225 (KPA27_06225) | 1234530..1235586 | - | 1057 | Protein_1183 | IS630 family transposase | - |
| KPA27_RS06230 (KPA27_06230) | 1235625..1236080 | - | 456 | Protein_1184 | hypothetical protein | - |
| KPA27_RS06235 (KPA27_06235) | 1236129..1236680 | - | 552 | WP_172067809.1 | hypothetical protein | - |
| KPA27_RS06240 (KPA27_06240) | 1236664..1236855 | - | 192 | WP_202847665.1 | thrombospondin type 3 repeat-containing protein | - |
| KPA27_RS06245 (KPA27_06245) | 1236856..1241752 | - | 4897 | Protein_1187 | Agglutinin receptor | VF |
| KPA27_RS06250 (KPA27_06250) | 1241925..1242515 | + | 591 | WP_000037243.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| KPA27_RS06255 (KPA27_06255) | 1242512..1243357 | + | 846 | WP_044770475.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| KPA27_RS06260 (KPA27_06260) | 1243443..1243727 | - | 285 | Protein_1190 | CHAP domain-containing protein | - |
| KPA27_RS06265 (KPA27_06265) | 1243841..1244851 | - | 1011 | WP_002936451.1 | Abi family protein | - |
| KPA27_RS06270 (KPA27_06270) | 1244988..1247789 | - | 2802 | Protein_1192 | phage tail tip lysozyme | - |
| KPA27_RS06275 (KPA27_06275) | 1247791..1250142 | - | 2352 | WP_014636283.1 | ATPase AAA | - |
| KPA27_RS06280 (KPA27_06280) | 1250099..1250452 | - | 354 | WP_014636282.1 | PrgI family protein | - |
| KPA27_RS06285 (KPA27_06285) | 1250514..1251368 | - | 855 | WP_014636281.1 | conjugal transfer protein TrbL | - |
| KPA27_RS06290 (KPA27_06290) | 1251387..1251629 | - | 243 | WP_001072182.1 | hypothetical protein | - |
| KPA27_RS06295 (KPA27_06295) | 1251647..1253464 | - | 1818 | WP_014636280.1 | type IV secretory system conjugative DNA transfer family protein | - |
| KPA27_RS06300 (KPA27_06300) | 1253464..1253952 | - | 489 | WP_202847663.1 | hypothetical protein | - |
| KPA27_RS06305 (KPA27_06305) | 1254029..1254613 | - | 585 | WP_014636278.1 | CPBP family intramembrane metalloprotease | - |
| KPA27_RS06310 (KPA27_06310) | 1254616..1254849 | - | 234 | WP_014636277.1 | hypothetical protein | - |
| KPA27_RS06315 (KPA27_06315) | 1254858..1255241 | - | 384 | WP_014636276.1 | hypothetical protein | - |
| KPA27_RS06320 (KPA27_06320) | 1255252..1255680 | - | 429 | WP_014636275.1 | hypothetical protein | - |
| KPA27_RS06325 (KPA27_06325) | 1255664..1257019 | - | 1356 | WP_014636274.1 | DNA (cytosine-5-)-methyltransferase | - |
| KPA27_RS06330 (KPA27_06330) | 1257168..1257986 | - | 819 | WP_014636272.1 | replication initiator protein A | - |
| KPA27_RS06335 (KPA27_06335) | 1257989..1258156 | - | 168 | WP_014636271.1 | hypothetical protein | - |
| KPA27_RS06340 (KPA27_06340) | 1258367..1259728 | - | 1362 | WP_044673442.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| KPA27_RS06345 (KPA27_06345) | 1259795..1261117 | - | 1323 | WP_002935127.1 | LCP family protein | - |
| KPA27_RS06350 (KPA27_06350) | 1261129..1261956 | - | 828 | WP_002941297.1 | prephenate dehydratase | - |
| KPA27_RS06355 (KPA27_06355) | 1261947..1262438 | - | 492 | WP_024393608.1 | shikimate kinase | - |
| KPA27_RS06360 (KPA27_06360) | 1262447..1263727 | - | 1281 | WP_172047414.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| KPA27_RS06365 (KPA27_06365) | 1263992..1265029 | + | 1038 | WP_202847662.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| KPA27_RS06370 (KPA27_06370) | 1265039..1266064 | + | 1026 | WP_012027207.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| KPA27_RS06375 (KPA27_06375) | 1266110..1266979 | + | 870 | WP_024395870.1 | shikimate dehydrogenase | - |
| KPA27_RS06380 (KPA27_06380) | 1266992..1268059 | + | 1068 | WP_024395869.1 | 3-dehydroquinate synthase | - |
| KPA27_RS06385 (KPA27_06385) | 1268257..1269057 | - | 801 | WP_002940641.1 | ABC transporter ATP-binding protein | - |
| KPA27_RS06390 (KPA27_06390) | 1269067..1269960 | - | 894 | WP_074391888.1 | ABC transporter permease | - |
| KPA27_RS06395 (KPA27_06395) | 1270016..1270990 | - | 975 | WP_044684205.1 | hypothetical protein | VF |
| KPA27_RS06400 (KPA27_06400) | 1271014..1271973 | - | 960 | WP_024400040.1 | hypothetical protein | VF |
| KPA27_RS06405 (KPA27_06405) | 1272678..1273679 | - | 1002 | WP_044668193.1 | tagatose-bisphosphate aldolase | - |
| KPA27_RS06410 (KPA27_06410) | 1273703..1274848 | - | 1146 | WP_024395469.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| KPA27_RS06415 (KPA27_06415) | 1275077..1276240 | + | 1164 | WP_202847450.1 | IS30 family transposase ISSeq6 | Transposase |
| KPA27_RS06420 (KPA27_06420) | 1276662..1277000 | - | 339 | WP_002938966.1 | YlbF/YmcA family competence regulator | - |
| KPA27_RS06425 (KPA27_06425) | 1277010..1278113 | - | 1104 | WP_202847661.1 | prephenate dehydrogenase | - |
| KPA27_RS06430 (KPA27_06430) | 1278121..1279287 | - | 1167 | WP_202847660.1 | chorismate synthase | - |
| KPA27_RS06435 (KPA27_06435) | 1279290..1279964 | - | 675 | WP_024378346.1 | type I 3-dehydroquinate dehydratase | - |
| KPA27_RS06440 (KPA27_06440) | 1279961..1281124 | - | 1164 | WP_202847659.1 | class I SAM-dependent rRNA methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|