MGE detailed information
MGE type: Prophage MGE length: 70419 bp
Accession: NZ_CP076301 Location: 569431..639849 Organism: Escherichia coli strain Survcare321 Replicon: chromosome
Accession: NZ_CP076301 Location: 569431..639849 Organism: Escherichia coli strain Survcare321 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KNN06_RS02825 (565330) | 565330..566550 | + | 1221 | WP_021523109.1 | DNA-binding transcriptional repressor Mlc | - |
| KNN06_RS02830 (566675) | 566675..567370 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| KNN06_RS02835 (567323) | 567323..568615 | - | 1293 | WP_071593650.1 | voltage-gated ClC-type chloride channel ClcB | - |
| KNN06_RS02840 (568774) | 568774..569388 | - | 615 | WP_001520571.1 | Tat proofreading chaperone DmsD | - |
| KNN06_RS02845 (569431) | 569431..570285 | - | 855 | WP_020233477.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| KNN06_RS02850 (570287) | 570287..570904 | - | 618 | WP_001520568.1 | dimethylsulfoxide reductase subunit B | - |
| KNN06_RS02855 (570915) | 570915..573338 | - | 2424 | WP_072170800.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KNN06_RS02860 (573399) | 573399..575825 | - | 2427 | WP_001551145.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KNN06_RS02865 (576024) | 576024..576329 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| KNN06_RS02870 (576437) | 576437..577147 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| KNN06_RS02875 (577150) | 577150..577710 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| KNN06_RS02880 (577745) | 577745..578086 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| KNN06_RS02885 (578221) | 578221..578547 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| KNN06_RS02890 (578753) | 578753..579967 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KNN06_RS02895 (579979) | 579979..580980 | + | 1002 | WP_199613695.1 | Zn-dependent oxidoreductase | - |
| KNN06_RS02900 (581168) | 581168..582448 | - | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KNN06_RS02905 (582504) | 582504..584075 | - | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| KNN06_RS02910 (584095) | 584095..584442 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| KNN06_RS02915 (584442) | 584442..585119 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| KNN06_RS02920 (585190) | 585190..585441 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KNN06_RS02925 (585514) | 585514..587985 | - | 2472 | WP_000048363.1 | exonuclease | - |
| KNN06_RS02930 (588079) | 588079..588270 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| KNN06_RS02935 (588267) | 588267..588455 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KNN06_RS26190 (589416) | 589416..589517 | - | 102 | Protein_579 | protein YdfB | - |
| KNN06_RS02945 (589519) | 589519..589674 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| KNN06_RS02950 (589843) | 589843..590250 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| KNN06_RS02955 (590331) | 590331..590558 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| KNN06_RS02960 (590542) | 590542..591063 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| KNN06_RS02965 (591044) | 591044..592009 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| KNN06_RS02970 (592050) | 592050..592448 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| KNN06_RS02975 (592651) | 592651..593316 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| KNN06_RS02980 (593525) | 593525..594139 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| KNN06_RS02985 (594142) | 594142..595164 | + | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| KNN06_RS02990 (595669) | 595669..596691 | + | 1023 | Protein_589 | ISNCY family transposase ISCARN112 | Transposase |
| KNN06_RS25895 (596812) | 596812..596961 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KNN06_RS02995 (597398) | 597398..597730 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KNN06_RS03000 (597933) | 597933..598238 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KNN06_RS03005 (598263) | 598263..598502 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KNN06_RS03010 (598502) | 598502..598789 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KNN06_RS03015 (598861) | 598861..599016 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KNN06_RS03020 (599233) | 599233..599484 | + | 252 | WP_000980994.1 | protein Rem | - |
| KNN06_RS03025 (599551) | 599551..599829 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KNN06_RS03030 (599831) | 599831..600880 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| KNN06_RS03035 (600894) | 600894..601646 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KNN06_RS03040 (601924) | 601924..602013 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KNN06_RS03045 (602068) | 602068..602280 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KNN06_RS03050 (602581) | 602581..602796 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KNN06_RS03060 (604560) | 604560..605018 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| KNN06_RS03065 (605185) | 605185..605355 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KNN06_RS03070 (605575) | 605575..605790 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KNN06_RS03075 (605795) | 605795..606106 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KNN06_RS03080 (606103) | 606103..606636 | + | 534 | WP_001092971.1 | lysozyme | - |
| KNN06_RS03085 (606633) | 606633..607130 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KNN06_RS03090 (607493) | 607493..607705 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KNN06_RS03095 (607814) | 607814..608511 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| KNN06_RS03100 (608504) | 608504..608680 | + | 177 | WP_138069336.1 | cold-shock protein | - |
| KNN06_RS03105 (608683) | 608683..608748 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KNN06_RS03110 (608753) | 608753..608983 | + | 231 | WP_000720962.1 | protein YnfN | - |
| KNN06_RS03115 (609155) | 609155..609328 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KNN06_RS03120 (609480) | 609480..609890 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KNN06_RS03125 (609948) | 609948..610181 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KNN06_RS03130 (610570) | 610570..611115 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| KNN06_RS03135 (611090) | 611090..613015 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| KNN06_RS03140 (613012) | 613012..613218 | + | 207 | WP_000198149.1 | gpW family protein | - |
| KNN06_RS03145 (613215) | 613215..614816 | + | 1602 | WP_001356819.1 | phage portal protein | - |
| KNN06_RS03150 (614797) | 614797..616116 | + | 1320 | WP_020233915.1 | S49 family peptidase | - |
| KNN06_RS03155 (616126) | 616126..616458 | + | 333 | WP_001708751.1 | head decoration protein | - |
| KNN06_RS03160 (616513) | 616513..617538 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| KNN06_RS03165 (617580) | 617580..617978 | + | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| KNN06_RS03170 (617990) | 617990..618343 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| KNN06_RS03175 (618355) | 618355..618933 | + | 579 | WP_033559746.1 | phage tail protein | - |
| KNN06_RS03180 (618930) | 618930..619325 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| KNN06_RS03185 (619333) | 619333..620073 | + | 741 | WP_001349920.1 | phage tail protein | - |
| KNN06_RS03190 (620089) | 620089..620511 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| KNN06_RS03195 (620493) | 620493..620927 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| KNN06_RS03200 (620920) | 620920..623481 | + | 2562 | WP_048219008.1 | phage tail tape measure protein | - |
| KNN06_RS03205 (623478) | 623478..623807 | + | 330 | WP_000847345.1 | phage tail protein | - |
| KNN06_RS03210 (623807) | 623807..624505 | + | 699 | WP_001551186.1 | phage minor tail protein L | - |
| KNN06_RS03215 (624511) | 624511..625254 | + | 744 | WP_032153655.1 | C40 family peptidase | - |
| KNN06_RS03220 (625191) | 625191..625793 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| KNN06_RS03225 (625854) | 625854..629333 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| KNN06_RS03230 (629401) | 629401..630000 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| KNN06_RS03235 (630065) | 630065..632464 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| KNN06_RS03240 (632461) | 632461..632742 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| KNN06_RS03245 (632752) | 632752..633456 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| KNN06_RS03250 (633467) | 633467..633760 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| KNN06_RS03255 (633780) | 633780..633890 | + | 111 | Protein_643 | tail fiber assembly protein | - |
| KNN06_RS03260 (633988) | 633988..634578 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KNN06_RS03265 (634895) | 634895..635128 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KNN06_RS03270 (635197) | 635197..635310 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KNN06_RS03275 (635914) | 635914..637197 | + | 1284 | Protein_647 | MHS family MFS transporter YdfJ | - |
| KNN06_RS03280 (637286) | 637286..638746 | + | 1461 | WP_099004457.1 | mannitol dehydrogenase family protein | - |
| KNN06_RS03285 (638782) | 638782..638985 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KNN06_RS03290 (639163) | 639163..639849 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator rspR | - |
| KNN06_RS03295 (639938) | 639938..640684 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| KNN06_RS03300 (640821) | 640821..642866 | + | 2046 | WP_001523328.1 | peptidyl-dipeptidase Dcp | - |
| KNN06_RS25900 (642911) | 642911..642991 | - | 81 | Protein_653 | hypothetical protein | - |
| KNN06_RS03305 (643231) | 643231..643623 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| KNN06_RS03310 (643878) | 643878..644768 | + | 891 | WP_001523326.1 | diguanylate cyclase DgcZ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|