MGE detailed information
MGE type: Conjugative plasmid MGE length: 94001 bp
Accession: NZ_CP076281 Location: 1..94001 Organism: Escherichia coli strain SA53-3 Replicon: plasmid pSA53IncI2
Accession: NZ_CP076281 Location: 1..94001 Organism: Escherichia coli strain SA53-3 Replicon: plasmid pSA53IncI2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A19_RS25590 (455) | 455..1486 | + | 1032 | WP_000907861.1 | plasmid replication initiator RepA | - |
| A7A19_RS25595 (2398) | 2398..2667 | + | 270 | WP_000079932.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| A7A19_RS25600 (2667) | 2667..2945 | + | 279 | WP_013009346.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| A7A19_RS25605 (3141) | 3141..3437 | - | 297 | WP_001419651.1 | hypothetical protein | - |
| A7A19_RS25610 (3782) | 3782..4369 | + | 588 | WP_077901048.1 | serine acetyltransferase | - |
| A7A19_RS25615 (4652) | 4652..5245 | - | 594 | WP_000517696.1 | ProQ/FINO family protein | - |
| A7A19_RS25620 (5599) | 5599..6945 | + | 1347 | WP_001132032.1 | protein YagA | - |
| A7A19_RS25625 (7224) | 7224..9104 | + | 1881 | WP_257122972.1 | colicin Ia central receptor-binding domain-containing protein | - |
| A7A19_RS25630 (9126) | 9126..9461 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| A7A19_RS25635 (9590) | 9590..9937 | + | 348 | WP_257122974.1 | DUF6404 family protein | - |
| A7A19_RS25640 (9955) | 9955..10545 | - | 591 | WP_052976260.1 | hypothetical protein | - |
| A7A19_RS25645 (10545) | 10545..10796 | - | 252 | WP_031322317.1 | hypothetical protein | - |
| A7A19_RS25650 (11241) | 11241..11543 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| A7A19_RS25655 (11540) | 11540..12166 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| A7A19_RS25660 (12378) | 12378..13649 | - | 1272 | WP_257122975.1 | Y-family DNA polymerase | - |
| A7A19_RS25665 (13649) | 13649..14086 | - | 438 | WP_000109069.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A7A19_RS25670 (14083) | 14083..14331 | - | 249 | WP_000618108.1 | DinI-like family protein | - |
| A7A19_RS25675 (14725) | 14725..15651 | + | 927 | WP_257122976.1 | DUF1281 domain-containing protein | - |
| A7A19_RS25680 (15648) | 15648..15959 | + | 312 | WP_257122996.1 | hypothetical protein | - |
| A7A19_RS25685 (16036) | 16036..16719 | + | 684 | WP_257122977.1 | DNA methylase | - |
| A7A19_RS25690 (16720) | 16720..16941 | + | 222 | WP_001104898.1 | hypothetical protein | - |
| A7A19_RS25695 (16922) | 16922..17388 | + | 467 | Protein_21 | DUF1380 domain-containing protein | - |
| A7A19_RS25700 (17434) | 17434..18210 | + | 777 | WP_257122978.1 | hypothetical protein | - |
| A7A19_RS25705 (18628) | 18628..19053 | + | 426 | WP_001198930.1 | antirestriction protein | - |
| A7A19_RS25710 (19100) | 19100..19519 | + | 420 | WP_257122979.1 | DUF1380 domain-containing protein | - |
| A7A19_RS25715 (19519) | 19519..19710 | + | 192 | WP_257122980.1 | hypothetical protein | - |
| A7A19_RS25720 (19724) | 19724..20026 | + | 303 | WP_097498621.1 | hypothetical protein | - |
| A7A19_RS25725 (20463) | 20463..20990 | + | 528 | WP_130091701.1 | single-stranded DNA-binding protein | - |
| A7A19_RS25730 (21048) | 21048..21281 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| A7A19_RS25735 (21347) | 21347..23311 | + | 1965 | WP_257122981.1 | ParB/RepB/Spo0J family partition protein | - |
| A7A19_RS25740 (23380) | 23380..23814 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| A7A19_RS25745 (23811) | 23811..24530 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| A7A19_RS25750 (24527) | 24527..25123 | + | 597 | WP_257122982.1 | hypothetical protein | - |
| A7A19_RS25755 (25589) | 25589..26089 | + | 501 | WP_257122983.1 | antirestriction protein ArdA | - |
| A7A19_RS25760 (26818) | 26818..27252 | + | 435 | WP_257122985.1 | post-segregation killing protein PndC | - |
| A7A19_RS25765 (27345) | 27345..27611 | + | 267 | WP_001247861.1 | hypothetical protein | - |
| A7A19_RS25770 (27802) | 27802..28191 | + | 390 | WP_001317525.1 | hypothetical protein | - |
| A7A19_RS25775 (28188) | 28188..29066 | + | 879 | WP_257122986.1 | Recombination-promoting nuclease RpnA | VF |
| A7A19_RS25780 (29128) | 29128..29346 | + | 219 | WP_257122987.1 | hypothetical protein | VF |
| A7A19_RS25785 (29377) | 29377..29628 | - | 252 | WP_000148292.1 | hypothetical protein | - |
| A7A19_RS25790 (29724) | 29724..29969 | - | 246 | WP_257122988.1 | hypothetical protein | - |
| A7A19_RS25795 (30209) | 30209..31057 | + | 849 | WP_257122989.1 | DUF4942 domain-containing protein | - |
| A7A19_RS25800 (31142) | 31142..31477 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| A7A19_RS25805 (31711) | 31711..32043 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| A7A19_RS25810 (32054) | 32054..34753 | + | 2700 | WP_257122990.1 | Protein TraI | Relaxase |
| A7A19_RS25815 (34779) | 34779..35351 | + | 573 | WP_001401844.1 | hypothetical protein | - |
| A7A19_RS25820 (35401) | 35401..37590 | - | 2190 | Protein_46 | peptidase domain-containing ABC transporter | - |
| A7A19_RS25825 (37590) | 37590..38144 | - | 555 | WP_257122991.1 | HlyD family secretion protein | - |
| A7A19_RS25830 (38198) | 38198..38623 | + | 426 | WP_257122992.1 | IS66 family transposase ISEc23 | Transposase |
| A7A19_RS25835 (38620) | 38620..38970 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| A7A19_RS25840 (39001) | 39001..40614 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| A7A19_RS25845 (40601) | 40601..41383 | - | 783 | WP_257122993.1 | hypothetical protein | - |
| A7A19_RS25850 (41486) | 41486..41848 | - | 363 | WP_244595851.1 | CPBP family intramembrane metalloprotease | - |
| A7A19_RS25855 (42906) | 42906..45203 | - | 2298 | WP_257115100.1 | F-type conjugative transfer protein TrbC | - |
| A7A19_RS25860 (45196) | 45196..46266 | - | 1071 | WP_257122994.1 | IncI1-type conjugal transfer protein TrbB | - |
| A7A19_RS25865 (46285) | 46285..47493 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| A7A19_RS25870 (47711) | 47711..48664 | - | 954 | WP_021513958.1 | hypothetical protein | - |
| - (48858) | 48858..48913 | - | 56 | NuclAT_1 | - | - |
| - (48858) | 48858..48913 | - | 56 | NuclAT_1 | - | - |
| - (48858) | 48858..48913 | - | 56 | NuclAT_1 | - | - |
| - (48858) | 48858..48913 | - | 56 | NuclAT_1 | - | - |
| - (49154) | 49154..49216 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (49154) | 49154..49216 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (49154) | 49154..49216 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (49154) | 49154..49216 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| A7A19_RS25875 (49266) | 49266..49418 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| A7A19_RS25880 (49490) | 49490..49741 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| A7A19_RS25885 (50041) | 50041..50337 | + | 297 | WP_001275298.1 | DinQ-like type I toxin DqlB | - |
| A7A19_RS25890 (50402) | 50402..50578 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| A7A19_RS25895 (50910) | 50910..51119 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| A7A19_RS25900 (51191) | 51191..51853 | - | 663 | WP_160453039.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| A7A19_RS25905 (51924) | 51924..54092 | - | 2169 | WP_257122961.1 | DotA/TraY family protein | - |
| A7A19_RS25910 (54189) | 54189..54773 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| A7A19_RS25915 (54802) | 54802..56004 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| A7A19_RS25920 (55971) | 55971..56585 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| A7A19_RS25925 (56585) | 56585..59629 | - | 3045 | WP_059338302.1 | IncI1-type conjugal transfer protein TraU | - |
| A7A19_RS25930 (59719) | 59719..60519 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| A7A19_RS25935 (60503) | 60503..60691 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| A7A19_RS25940 (60755) | 60755..61159 | - | 405 | WP_257115093.1 | IncI1-type conjugal transfer protein TraR | - |
| A7A19_RS25945 (61210) | 61210..61737 | - | 528 | WP_001055571.1 | conjugal transfer protein TraQ | - |
| A7A19_RS25950 (61737) | 61737..62441 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| A7A19_RS25955 (62441) | 62441..63730 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| A7A19_RS25960 (63733) | 63733..64716 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| A7A19_RS25965 (64727) | 64727..65419 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| A7A19_RS25970 (65416) | 65416..65763 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| A7A19_RS25975 (65781) | 65781..69548 | - | 3768 | WP_247171889.1 | DUF5710 domain-containing protein | - |
| A7A19_RS25980 (69638) | 69638..70189 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| A7A19_RS25985 (70204) | 70204..70494 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| A7A19_RS25990 (70491) | 70491..71639 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| A7A19_RS25995 (71636) | 71636..72454 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| A7A19_RS26000 (72451) | 72451..72909 | - | 459 | WP_257122965.1 | hypothetical protein | VF |
| A7A19_RS26005 (73304) | 73304..73888 | - | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| A7A19_RS26010 (73948) | 73948..75150 | - | 1203 | WP_257122966.1 | conjugal transfer protein TraF | - |
| A7A19_RS26015 (75236) | 75236..76060 | - | 825 | WP_257122967.1 | conjugal transfer protein TraE | - |
| A7A19_RS26020 (76211) | 76211..77365 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| A7A19_RS26025 (77364) | 77364..77717 | + | 354 | WP_001393368.1 | hypothetical protein | - |
| A7A19_RS26030 (77965) | 77965..79389 | - | 1425 | WP_257122968.1 | hypothetical protein | VF |
| A7A19_RS26035 (79389) | 79389..80045 | - | 657 | WP_001306767.1 | hypothetical protein | VF |
| A7A19_RS26040 (80030) | 80030..80590 | - | 561 | WP_000014117.1 | hypothetical protein | VF |
| A7A19_RS26045 (80600) | 80600..81214 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| A7A19_RS26050 (81232) | 81232..82329 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| A7A19_RS26055 (82342) | 82342..83895 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| A7A19_RS26060 (83906) | 83906..84358 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| A7A19_RS26065 (84345) | 84345..85640 | - | 1296 | WP_137556664.1 | type 4b pilus protein PilO2 | - |
| A7A19_RS26070 (85633) | 85633..87315 | - | 1683 | WP_257122970.1 | Outer membrane lipoprotein BfpB | VF |
| A7A19_RS26075 (87329) | 87329..87766 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| A7A19_RS26080 (87766) | 87766..88833 | - | 1068 | WP_001384247.1 | hypothetical protein | VF |
| A7A19_RS26085 (89507) | 89507..89959 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| A7A19_RS26090 (90002) | 90002..90256 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| A7A19_RS26095 (90524) | 90524..91090 | - | 567 | WP_000776428.1 | protein TraD | - |
| A7A19_RS26100 (91104) | 91104..91787 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| A7A19_RS26105 (92040) | 92040..92573 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| A7A19_RS26110 (93015) | 93015..93302 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| A7A19_RS26115 (93340) | 93340..93498 | - | 159 | Protein_105 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|