MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 84887 bp
Accession: NZ_CP076250 Location: 584499..669385 Organism: Xanthomonas translucens pv. poae strain LMG 728 Replicon: chromosome
Accession: NZ_CP076250 Location: 584499..669385 Organism: Xanthomonas translucens pv. poae strain LMG 728 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KM539_RS02615 (KM539_02600) | 579560..581029 | + | 1470 | WP_053840887.1 | TIGR04222 domain-containing membrane protein | - |
| KM539_RS02620 (KM539_02605) | 581029..581682 | + | 654 | WP_053840888.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| KM539_RS02625 (KM539_02610) | 581679..582311 | + | 633 | WP_053840889.1 | lysophospholipid acyltransferase family protein | - |
| KM539_RS02630 (KM539_02615) | 582308..583282 | + | 975 | WP_053840890.1 | phosphatidate cytidylyltransferase | - |
| KM539_RS20590 | 583482..583607 | - | 126 | WP_272929802.1 | hypothetical protein | - |
| KM539_RS02635 (KM539_02620) | 583604..583876 | - | 273 | WP_003471008.1 | DNA-binding transcriptional regulator Fis | - |
| KM539_RS02640 (KM539_02625) | 583992..584630 | - | 639 | WP_080999409.1 | DUF3426 domain-containing protein | - |
| KM539_RS02645 (KM539_02630) | 585087..585455 | - | 369 | WP_053840891.1 | helix-turn-helix transcriptional regulator | - |
| KM539_RS02650 (KM539_02635) | 585645..586103 | + | 459 | WP_144437155.1 | hypothetical protein | - |
| KM539_RS02655 (KM539_02640) | 586148..587068 | - | 921 | WP_053840893.1 | 50S ribosomal protein L11 methyltransferase | - |
| KM539_RS02660 (KM539_02645) | 587276..588223 | + | 948 | WP_053840894.1 | hypothetical protein | - |
| KM539_RS02665 (KM539_02650) | 588220..588573 | + | 354 | WP_053840895.1 | hypothetical protein | - |
| KM539_RS02670 (KM539_02655) | 588951..590318 | - | 1368 | WP_053840896.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| KM539_RS02675 (KM539_02660) | 590462..590947 | - | 486 | WP_009611175.1 | acetyl-CoA carboxylase biotin carboxyl carrier protein | - |
| KM539_RS02680 (KM539_02665) | 591053..591499 | - | 447 | WP_009611169.1 | type II 3-dehydroquinate dehydratase | - |
| KM539_RS02685 (KM539_02670) | 591979..593376 | + | 1398 | WP_053840897.1 | FAD/NAD(P)-binding protein | - |
| KM539_RS02690 (KM539_02675) | 593503..594063 | - | 561 | WP_053840898.1 | TlpA disulfide reductase family protein | - |
| KM539_RS02695 (KM539_02680) | 594060..596345 | - | 2286 | WP_053840899.1 | protein-disulfide reductase DsbD | - |
| KM539_RS02700 (KM539_02685) | 596350..596682 | - | 333 | WP_053840900.1 | divalent-cation tolerance protein CutA | - |
| KM539_RS02705 (KM539_02690) | 597001..598770 | - | 1770 | WP_053840901.1 | endonuclease | - |
| KM539_RS02710 (KM539_02695) | 599045..599332 | + | 288 | WP_003470504.1 | co-chaperone GroES | - |
| KM539_RS02715 (KM539_02700) | 599468..601117 | + | 1650 | WP_009611148.1 | Glucosamine-6-phosphate deaminase | VF |
| KM539_RS02720 (KM539_02705) | 601585..602658 | + | 1074 | WP_053840902.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| KM539_RS02725 (KM539_02710) | 602972..603256 | + | 285 | WP_053840903.1 | GIY-YIG nuclease family protein | - |
| KM539_RS02730 (KM539_02715) | 603503..605023 | - | 1521 | WP_053840904.1 | acetyl-CoA hydrolase/transferase family protein | - |
| KM539_RS02735 (KM539_02720) | 605149..607377 | + | 2229 | WP_053840905.1 | hypothetical protein | - |
| KM539_RS02740 (KM539_02725) | 607831..610671 | + | 2841 | WP_053840906.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| KM539_RS02745 (KM539_02730) | 610682..610846 | - | 165 | WP_170874234.1 | hypothetical protein | - |
| KM539_RS02750 (KM539_02735) | 610947..611504 | - | 558 | WP_053840909.1 | VUT family protein | - |
| KM539_RS02755 (KM539_02740) | 611629..612615 | - | 987 | WP_237653860.1 | IS110 family transposase ISStma4 | Transposase |
| KM539_RS02760 (KM539_02745) | 613026..614135 | - | 1110 | WP_053841633.1 | glycerophosphodiester phosphodiesterase | - |
| KM539_RS02765 (KM539_02750) | 614177..616474 | - | 2298 | WP_053841634.1 | TonB-dependent receptor | - |
| KM539_RS02770 (KM539_02755) | 616960..618840 | + | 1881 | WP_080999466.1 | S53 family serine peptidase | - |
| KM539_RS02775 (KM539_02760) | 618943..619923 | - | 981 | WP_053841635.1 | mitochondrial fission ELM1 family protein | - |
| KM539_RS02780 (KM539_02765) | 620056..620646 | + | 591 | WP_053841636.1 | malonic semialdehyde reductase | - |
| KM539_RS02785 (KM539_02770) | 620741..621376 | + | 636 | WP_080999472.1 | YceI family protein | - |
| KM539_RS02790 (KM539_02775) | 621828..622619 | - | 792 | WP_053841637.1 | siderophore-interacting protein | - |
| KM539_RS02795 (KM539_02780) | 622704..623264 | - | 561 | WP_053841638.1 | PadR family transcriptional regulator | - |
| KM539_RS02800 (KM539_02785) | 623704..624090 | - | 387 | WP_003467292.1 | STAS domain-containing protein | - |
| KM539_RS02805 (KM539_02790) | 624087..624527 | - | 441 | WP_053841639.1 | ATP-binding protein | - |
| KM539_RS02810 (KM539_02795) | 624524..626464 | - | 1941 | WP_053841650.1 | SpoIIE family protein phosphatase | - |
| KM539_RS02815 (KM539_02800) | 626700..629390 | + | 2691 | WP_053841640.1 | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | - |
| KM539_RS02820 (KM539_02805) | 629503..629697 | + | 195 | WP_039008097.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| KM539_RS02825 (KM539_02810) | 629703..629915 | + | 213 | WP_053841641.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| KM539_RS02830 (KM539_02815) | 629902..630195 | + | 294 | WP_139117962.1 | hypothetical protein | - |
| KM539_RS02835 (KM539_02820) | 630347..631063 | + | 717 | WP_068819871.1 | hypothetical protein | - |
| KM539_RS02840 (KM539_02825) | 631053..633335 | + | 2283 | WP_053841643.1 | DEAD/DEAH box helicase | - |
| KM539_RS02845 (KM539_02830) | 633354..633650 | + | 297 | WP_080999467.1 | DCL family protein | - |
| KM539_RS02850 (KM539_02835) | 634193..635929 | - | 1737 | WP_186007687.1 | reverse transcriptase domain-containing protein | - |
| KM539_RS02855 (KM539_02840) | 637067..637666 | + | 600 | WP_053841644.1 | hypothetical protein | - |
| KM539_RS02860 (KM539_02845) | 637885..638292 | - | 408 | WP_053841645.1 | RAQPRD family integrative conjugative element protein | - |
| KM539_RS02865 | 638658..639527 | + | 870 | WP_237654004.1 | S1 family peptidase | - |
| KM539_RS02870 | 639534..640043 | + | 510 | WP_237654005.1 | S1 family peptidase | - |
| KM539_RS02875 (KM539_02855) | 640096..640272 | - | 177 | WP_186007688.1 | hypothetical protein | - |
| KM539_RS02880 (KM539_02860) | 640553..640750 | + | 198 | Protein_568 | hypothetical protein | - |
| KM539_RS02885 | 640919..641122 | + | 204 | Protein_569 | SymE family type I addiction module toxin | - |
| KM539_RS02890 (KM539_02870) | 641323..642900 | + | 1578 | WP_080999471.1 | N-acetylmuramoyl-L-alanine amidase | - |
| KM539_RS02895 (KM539_02875) | 643083..644218 | + | 1136 | WP_237654006.1 | IS3 family transposase ISAisp2 | Transposase |
| KM539_RS02900 | 644499..644990 | + | 492 | WP_237654007.1 | hypothetical protein | - |
| KM539_RS02905 (KM539_02885) | 645019..645717 | + | 699 | WP_170874174.1 | hypothetical protein | - |
| KM539_RS20595 (KM539_02890) | 645778..646857 | + | 1080 | WP_272929803.1 | hypothetical protein | VF |
| KM539_RS02915 (KM539_02895) | 646885..647700 | - | 816 | WP_237654008.1 | hypothetical protein | - |
| KM539_RS02920 (KM539_02900) | 647876..648277 | + | 402 | WP_068819825.1 | SymE family type I addiction module toxin | - |
| KM539_RS02925 (KM539_02905) | 648428..649024 | + | 597 | WP_237654088.1 | hypothetical protein | - |
| KM539_RS02930 (KM539_02910) | 649037..650029 | + | 993 | WP_139117944.1 | hypothetical protein | - |
| KM539_RS02935 (KM539_02915) | 650386..651006 | + | 621 | WP_237654089.1 | DUF4142 domain-containing protein | - |
| KM539_RS02940 (KM539_02920) | 651258..653027 | - | 1770 | WP_053841766.1 | chloride channel protein | - |
| KM539_RS02945 (KM539_02925) | 653660..654637 | + | 978 | WP_053841749.1 | polysaccharide deacetylase family protein | - |
| KM539_RS02950 (KM539_02930) | 654747..654947 | + | 201 | WP_053836404.1 | hypothetical protein | - |
| KM539_RS02955 (KM539_02935) | 655595..656215 | + | 621 | WP_080999479.1 | DUF2076 family protein | - |
| KM539_RS20600 | 656544..656675 | - | 132 | WP_260654061.1 | hypothetical protein | - |
| KM539_RS02960 (KM539_02940) | 656696..657079 | + | 384 | WP_053841750.1 | hypothetical protein | - |
| KM539_RS02965 (KM539_02945) | 657183..658004 | + | 822 | WP_053841751.1 | alpha/beta hydrolase | - |
| KM539_RS02970 (KM539_02950) | 658293..660380 | + | 2088 | WP_053841752.1 | beta-galactosidase | - |
| KM539_RS02975 (KM539_02955) | 660571..661674 | - | 1104 | WP_053841753.1 | DUF1615 domain-containing protein | - |
| KM539_RS02980 (KM539_02960) | 661737..662576 | - | 840 | WP_053841754.1 | NAD(P)H-dependent oxidoreductase | - |
| KM539_RS02985 (KM539_02965) | 662661..663554 | + | 894 | WP_053841755.1 | LysR family transcriptional regulator | - |
| KM539_RS02990 (KM539_02970) | 663822..664658 | - | 837 | WP_053841756.1 | SAM-dependent methyltransferase | - |
| KM539_RS02995 (KM539_02975) | 664907..665782 | + | 876 | WP_053841757.1 | DMT family transporter | - |
| KM539_RS03000 (KM539_02980) | 665989..666336 | + | 348 | WP_053841758.1 | hypothetical protein | - |
| KM539_RS03005 (KM539_02985) | 666485..667864 | + | 1380 | WP_053841768.1 | D-serine/D-alanine/glycine transporter | - |
| KM539_RS03010 (KM539_02990) | 668025..668936 | + | 912 | WP_053836417.1 | CorA family divalent cation transporter | - |
| KM539_RS03015 (KM539_02995) | 668955..669314 | - | 360 | WP_053836418.1 | hypothetical protein | - |
| KM539_RS03020 (KM539_03000) | 669616..670515 | + | 900 | WP_053836419.1 | AraC family transcriptional regulator | - |
| KM539_RS03025 (KM539_03005) | 670623..671402 | - | 780 | WP_053841769.1 | transporter substrate-binding domain-containing protein | - |
| KM539_RS03030 (KM539_03010) | 671674..672687 | + | 1014 | WP_186007691.1 | hypothetical protein | - |
| KM539_RS03035 (KM539_03015) | 673129..674115 | - | 987 | WP_237653860.1 | IS110 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|